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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038392 ID=TCONS_00038392|Name=TCONS_00038392|organism=Clytia hemisphaerica|type=transcript|length=835bp
TTTCAATTGACTGGACATTTGTTTGACTCATAACTGTGACAAAACAATGA
CAGACAGACTTTACAACGACAATAACAGTAACAATAACCAAAGAAGTGGC
ATCATAAATCAGGGAATTAtttagtttcaattttcttactAAATTTAGAT
AGCCATGTTTGGATTTGCTTTGATAATTTGTAAGATCCTCGAACGTTTTA
AGGCAAATAAATTGATCCTGCACATTTGAGGAGTATCACAACCATTTTAT
TTGAggaaaatctttataaaaaattGAGTGTAAAATTGTTACTAAATTTG
ACATAACATTTATTCTTTTCGTCACCACTTCAACATCTTTTCTCTACACT
AGATAATGATGAACCTGAAGATATTGCCCTTGTTGAAAATGCTGAGAATA
TTGCTGGACTATTGACCCTTTGTCAGGAGGCAGCAGCACTCGAAATAGGC
TTTCAAACGCAAATTAAACAATGCATTGAACTGAAAGGCCCTAGCTCACT
TTTGACTGGCGAGAAAACTCTTCTTTTGTTGGCATCATACCCCAAATGTA
CAGATGGCATTCTTTATGGCTTGCCTTTGGTTTTGGAAATGAATGGTGAA
AAATTCTTGTACCTCAGGTACTGCGAAACTGGGATCTACAGAggattttt
caaacaaaatcttcacGCATTGATGGGTGATTTTATTAAGGAGAATGATA
TTACCAAGGTTTTTCCTGTTCGAATTTTTAATGATTGGGACATCAatgca
aaaatatttcaaagatcGGAATGAAAGAAAGGATCAAAGAATCACTCCGG
TTTGATggaaatcataataaaattcATTCAGAATT Run BLAST on NCBI transcript from alignment at sc0001839:21011..22168- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038392 ID=TCONS_00038392|Name=TCONS_00038392|organism=Clytia hemisphaerica|type=transcript|length=1158bp|location=Sequence derived from alignment at sc0001839:21011..22168- (Clytia hemisphaerica)
TTTCAATTGACTGGACATTTGTTTGACTCATAACTGTGACAAAACAATGA
CAGACAGACTTTACAACGACAATAACAGTAACAATAACCAAAGAAGTGGC
ATCATAAATCAGGGAATTATTTAGTTTCAATTTTCTTACTAAATTTAGAT
AGCCATGTTTGGATTTGCTTTGATAATTTGTAAGATCCTCGAACGTTTTA
AGGCAAATAAATTGATCCTGCACATTTGAGGAGTATCACAACCATTTTAT
TTGAGGAAAATCTTTATAAAAAATTGAGTGTAAAATTGTTACTAAATTTG
ACATAACATTTATTCTTTTCGTCACCACTTCAACATCTTTTCTCTACACT
AGATAATGATGAACCTGAAGATATTGCCCTTGTTGAAAATGCTGAGAATA
TTGCTGGACTATTGACCCTTTGTCAGGAGGCAGCAGCACTCGAAATAGGC
TTTCAAACGCAAATTAAACAATGCATTGAACTGAAAGGCCCTAGCTCACT
TTTGACTGGCGAGAAAACTCTTCTTTTGTTGGCATCATACCCCAAATGTA
CAGATGGCATTCTTTATGGCTTGCCTTTGGTTTTGGAAATGAATGGTGAA
AAATTCTTGTACCTCAGGTAATTGTTTTGATACAAAAAAGAGATGAAAGT
ATCTTATCAATAAACTGTAGTATATATCTTAAAAACTTGTAATGTTTTTA
ATTCCTTAGGTACTGCGAAACTGGGATCTACAGAGGATTTTTCAAACAAA
ATCTTCACGCATTGATGGGTGATTTTATTAAGGAGAATGATATTACCAAG
GTTTTTCCTGTTCGAATTTTTAATGATTGGGACATCAATGCAAAAATATT
TCAAAGATCGGAATGAAAGAAAGGTAAATTATAACTGCCTAAAAATTACC
TTAAGTGTGTCTCATAGTAAACAAAATAGCATTAGTTTTCAAAACTGTTT
TTTCAGTCAAAAGATGAATAAGATTTTTTCTTATTCGAGTCTAAAAATTA
GAGAAAGACAATAACATCTTCTTTTCAAGGAACTTGTTCAATATATTTTG
CTGTAATACTGAATAAAACTATTTGAATAATGTTCTACTGTGATACTTTT
CTAGGATCAAAGAATCACTCCGGTTTGATGGAAATCATAATAAAATTCAT
TCAGAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038392-exon-sc0001839-1575043694:21552..22168 | TCONS_00038392-exon-sc0001839-1575043694:21552..22168 | Clytia hemisphaerica | exon |
| TCONS_00038392-exon-sc0001839-1575043694:21296..21459 | TCONS_00038392-exon-sc0001839-1575043694:21296..21459 | Clytia hemisphaerica | exon |
| TCONS_00038392-exon-sc0001839-1575043694:21011..21064 | TCONS_00038392-exon-sc0001839-1575043694:21011..21064 | Clytia hemisphaerica | exon |
| TCONS_00038392-exon-sc0001839-1510915933:21552..22168 | TCONS_00038392-exon-sc0001839-1510915933:21552..22168 | Clytia hemisphaerica | exon |
| TCONS_00038392-exon-sc0001839-1510915933:21296..21459 | TCONS_00038392-exon-sc0001839-1510915933:21296..21459 | Clytia hemisphaerica | exon |
| TCONS_00038392-exon-sc0001839-1510915933:21011..21064 | TCONS_00038392-exon-sc0001839-1510915933:21011..21064 | Clytia hemisphaerica | exon |
| TCONS_00038392-exon-sc0001839-1491911889:21552..22168 | TCONS_00038392-exon-sc0001839-1491911889:21552..22168 | Clytia hemisphaerica | exon |
| TCONS_00038392-exon-sc0001839-1491911889:21296..21459 | TCONS_00038392-exon-sc0001839-1491911889:21296..21459 | Clytia hemisphaerica | exon |
| TCONS_00038392-exon-sc0001839-1491911889:21011..21064 | TCONS_00038392-exon-sc0001839-1491911889:21011..21064 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001839 | supercontig | sc0001839:21011..22168 - |
Blast
The following BLAST results are available for this feature:
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