TCONS_00038391 (transcript) - C. hemisphaerica

Overview
NameTCONS_00038391
Unique NameTCONS_00038391
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2474

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00038391 ID=TCONS_00038391|Name=TCONS_00038391|organism=Clytia hemisphaerica|type=transcript|length=2474bp
tgaagtttgaattttttatcatCTCCATGGAATGAACCTCTTTCCAAACA
TTTATTCTGAAGTCCTAAAGTCCTATCATCATCTTCTCTTTTAGTAAAAA
ACAGAAAGGAATGCTGAATGTCTCAACAACTTACTCTAATTTCAAATTGA
TAGTATAATGGgattTGTTTTCAATTGACTGGACATTTGTTTGACTCATA
ACTGTGACAAAACAATGACAGACAGACTTTACAACGACAATAACAGTAAC
AATAACCAAAGAAGTGGCATCATAAATCAGGGAATTAtttagtttcaatt
ttcttactAAATTTAGATAGCCATGTTTGGATTTGCTTTGATAATTTGTA
AGATCCTCGAACGTTTTAAGGCAAATAAATTGATCCTGCACATTTGAGGA
GTATCACAACCATTTTATTTGAggaaaatctttataaaaaattGAGTGTA
AAATTGTTACTAAATTTGACATAACATTTATTCTTTTCGTCACCACTTCA
ACATCTTTTCTCTACACTAGATAATGATGAACCTGAAGATATTGCCCTTG
TTGAAAATGCTGAGAATATTGCTGGACTATTGACCCTTTGTCAGGAGGCA
GCAGCACTCGAAATAGGCTTTCAAACGCAAATTAAACAATGCATTGAACT
GAAAGGCCCTAGCTCACTTTTGACTGGCGAGAAAACTCTTCTTTTGTTGG
CATCATACCCCAAATGTACAGATGGCATTCTTTATGGCTTGCCTTTGGTT
TTGGAAATGAATGGTGAAAAATTCTTGTACCTCAGGTACTGCGAAACTGG
GATCTACAGAggatttttcaaacaaaatcttcacGCATTGATGGGTGATT
TTATTAAGGAGAATGATATTACCAAGGTTTTTCCTGTTCGAATTTTTAAT
GATTGGGACATCAatgcaaaaatatttcaaagatcGGAATGAAAGAAAGG
ACACAGTGAAGAAAACAACTCGCAAGTATTCTCAAAGAATACAGTCATAA
AAGGTGGCTGTCTGAACAAAACGATTCCTACCGCACTGAAAGTTTTCCAG
AAATATTACAACGAATTTGCGCCTGGTTTTGTCATTTATTGTAATAGAAA
TGCTCGCTATGCAAATGGACAATCTGATAAGTActATTACAGATTGGATG
GTATTGGGGACAAAGATCATTGGTATTCTTTCATTGAAGATTTTGCGATT
CTAGAACCTAATTCTATTCACGATTTCTTCAAAGACAAGGAAAGTCTTTC
CTTAGAAATACACTGTGATTTAATATCTGCGTTACCAAACATACACTCTT
GGACCAATGATTCCAACAGCGGAGTTAAAAAAGAGCATTGCTTTATCCCT
ACTGGTCGATCACCTCGTAATATTATTTTAGACGTAATGGATAAAGACAT
TCATAATAATTTTATCATAAAAATACTTTGTTATGTGTTGGATGGTGCCT
ATCATCTCAAGAAGAAACCAAATCTTCAGAAGAAACCAAAACCAAAAAGA
TTGTCGTTAACTAAAAAGCCAAGAAAGACTCTCACTCAAGCCCAACTATT
GGATGAATTAGACCTTCCAGAGGATACCTTTGATGCTCCAACGATGATGA
AACCTTCTCCATATTTAGATTTCAAACACAGTCTTTTCAATGATGGTACT
ATCCTTTGGAGAGAGAATACAATCAATAGACAAGTGGTTGTAATGAATGA
TTACGACTCCCTTACTGGTATATTTAAGTTTAATGACTTTGCTATGATAA
CCCGCACAATTCGTCGAAACTCGATGATCCATCTCGTATGCACTTGTGAC
ACCTTCCGAACACTTTCTTCAGTTGTTAAATCATCTGATTGGGATGGTGT
CAAATGCTGTCATATCCAAGCTATCAAAGACATTTATAGCGAGTTCAAAA
TTTCTGTGAAGCCTCATGAAGCATTTGCTACTCATAGCTATTCAATTCCA
CCAGCCTCCGTTGCAAGTGAAAATGCTTTGGCCAAACGTATAGAAAAAGG
ATTGCAAGCATATAGTGAAGATGTCATGGTTCTGGACAGTGTAAATGTGG
AGAAATTTTCAGTTCGTTCCTCAATCGGCCATCATTTCGTTCAcgttttc
aaatcaaatcaagatgATCGAGTATTTGTGGCTTGTCAATCTGGAATATG
CTCTAAGCGATATCGAAAACTGGTCAATTTCTGCACGATGGATGAAGTCG
CTTTATGTGCGCACTTAACTGTTTTCAAATCATACCTGGATTGTAACTGG
AAAAAGCATCGTCTTCTGCGAATCTTGCGCTGGCAGAATATTCCGGATGA
TGGTACCGCCATGGACGATAAAGACGAggttgaagaaaaagaagaggaag
aagatgAGGTCGAAAACGAGTTTGAAATGGAGCTTGAAAAAGAGCTTGCT
TCCGAAAACTCTAAATCGTCTAAGGTAAAGTTCTACGCTCTCAATTTTCC
ATTACAGACATCATCAAATATTTT
Run BLAST on NCBI

protein sequence of TCONS_00038391-protein

>TCONS_00038391-protein ID=TCONS_00038391-protein|Name=TCONS_00038391-protein|organism=Clytia hemisphaerica|type=polypeptide|length=362bp
MDKDIHNNFIIKILCYVLDGAYHLKKKPNLQKKPKPKRLSLTKKPRKTLT
QAQLLDELDLPEDTFDAPTMMKPSPYLDFKHSLFNDGTILWRENTINRQV
VVMNDYDSLTGIFKFNDFAMITRTIRRNSMIHLVCTCDTFRTLSSVVKSS
DWDGVKCCHIQAIKDIYSEFKISVKPHEAFATHSYSIPPASVASENALAK
RIEKGLQAYSEDVMVLDSVNVEKFSVRSSIGHHFVHVFKSNQDDRVFVAC
QSGICSKRYRKLVNFCTMDEVALCAHLTVFKSYLDCNWKKHRLLRILRWQ
NIPDDGTAMDDKDEVEEKEEEEDEVENEFEMELEKELASENSKSSKVKFY
ALNFPLQTSSNI
Run BLAST on NCBI

transcript from alignment at sc0001839:18300..23041-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00038391 ID=TCONS_00038391|Name=TCONS_00038391|organism=Clytia hemisphaerica|type=transcript|length=4742bp|location=Sequence derived from alignment at sc0001839:18300..23041- (Clytia hemisphaerica)
TGAAGTTTGAATTTTTTATCATCTCCATGGAATGAACCTCTTTCCAAACA
TTTATTCTGAAGTCCTAAAGTCCTATCATCATCTTCTCTTTTAGTAAAAA
ACAGAAAGGAATGCTGAATGTCTCAACAACTTACTCTAATTTCAAATTGA
TAGTATAATGGGTAAGTTAAATTTCCTAGAGTACCTTATACATAAAGGGT
TAAATTGTAGGAGGGGCAATTTTGTTTTTTTATTTTGTTTCATTTTTTCT
TTGACATGCTCTTGGCTCTTTTTGTTCGACTGATTTTTTTGATAGATGTT
CATGATTAAATGGAACTACCTGTGAATTTGTAAGTTTTTGTATTATGGTT
ATTATTACAGTAAAAGTTTTAGCCTAGATTTTTGAAACAGAGTACTCTAC
TTAACAACTTAAGTCAAAGTTCTTTTGGTTCTTTTTCTGTTGAATATTGC
ATTTTTCTAGTTTTACCTAGCTTTGAAAAATTTATTACAAGTCAGTAATG
AGAATTATATAAGAATATTGATGTGAAAAAGTAGTCAATATATAGAATAA
TTAATTCATAATAGTTCCCAATTATTAATTTAAATTTATTTATTAAAGAA
AGGTCTCTCAAGAATGACCCTGTAATATATTTATAGGCAAAAAATCTCAA
ACCATCTTCTTAGACCTTTAGTTCATAAATATTTTTCTTATTTTTTCCCA
CTATCCATTTAATTTCTATTTCTAATCATTTATATGCATAAATTTCCACT
GAAAAGTAACAATATGAATAATTTTAAGAACAGAATCAATCAAATTAAAC
ATGTGAAAGTTTATTCAATGAAAATAACAAACATGAAAATAAGTTACTAA
GTAATTTTGATTTTAGGATTTGTTTTCAATTGACTGGACATTTGTTTGAC
TCATAACTGTGACAAAACAATGACAGACAGACTTTACAACGACAATAACA
GTAACAATAACCAAAGAAGTGGCATCATAAATCAGGGAATTATTTAGTTT
CAATTTTCTTACTAAATTTAGATAGCCATGTTTGGATTTGCTTTGATAAT
TTGTAAGATCCTCGAACGTTTTAAGGCAAATAAATTGATCCTGCACATTT
GAGGAGTATCACAACCATTTTATTTGAGGAAAATCTTTATAAAAAATTGA
GTGTAAAATTGTTACTAAATTTGACATAACATTTATTCTTTTCGTCACCA
CTTCAACATCTTTTCTCTACACTAGATAATGATGAACCTGAAGATATTGC
CCTTGTTGAAAATGCTGAGAATATTGCTGGACTATTGACCCTTTGTCAGG
AGGCAGCAGCACTCGAAATAGGCTTTCAAACGCAAATTAAACAATGCATT
GAACTGAAAGGCCCTAGCTCACTTTTGACTGGCGAGAAAACTCTTCTTTT
GTTGGCATCATACCCCAAATGTACAGATGGCATTCTTTATGGCTTGCCTT
TGGTTTTGGAAATGAATGGTGAAAAATTCTTGTACCTCAGGTAATTGTTT
TGATACAAAAAAGAGATGAAAGTATCTTATCAATAAACTGTAGTATATAT
CTTAAAAACTTGTAATGTTTTTAATTCCTTAGGTACTGCGAAACTGGGAT
CTACAGAGGATTTTTCAAACAAAATCTTCACGCATTGATGGGTGATTTTA
TTAAGGAGAATGATATTACCAAGGTTTTTCCTGTTCGAATTTTTAATGAT
TGGGACATCAATGCAAAAATATTTCAAAGATCGGAATGAAAGAAAGGTAA
ATTATAACTGCCTAAAAATTACCTTAAGTGTGTCTCATAGTAAACAAAAT
AGCATTAGTTTTCAAAACTGTTTTTTCAGTCAAAAGATGAATAAGATTTT
TTCTTATTCGAGTCTAAAAATTAGAGAAAGACAATAACATCTTCTTTTCA
AGGAACTTGTTCAATATATTTTGCTGTAATACTGAATAAAACTATTTGAA
TAATGTTCTACTGTGATACTTTTCTAGGATCAAAGAATCACTCCGGTTTG
ATGGAAATCATAATAAAATTCATTCAGAATTCGATTTATCATTTCTCACG
ATCACAATTTTTAGGCAAATTCTATTAATTACCTTTATATCAGAATATTT
CCTTTTTTCAATGTATTTTCTCATTCAAGGACACAGTGAAGAAAACAACT
CGCAAGTATTCTCAAAGAATACAGTCATAAAAGGTGGCTGTCTGAACAAA
ACGATTCCTACCGCACTGAAAGTTTTCCAGAAATATTACAACGAATTTGC
GCCTGGTTTTGTCATTTATTGTAATAGAAATGCTCGCTATGCAAATGGAC
AATCTGATAAGTAGTAAGTCATTATTTTTATATAAAGTAGTTTCTTTAAA
ATTAATATTTTATTTTTGATCACAAAAATTAGCAGTTGAGTCTATATCCT
ACAATCTAATTACAACTGAAGTCTTCCCAACTTTGATAAAAACATTACTC
AAAAGAAACATATCGTGGGAGATATGGCGATAAGGGTAGAAAAACAAACC
AAAAACCATGTCAATCTAAAACTAGAATTACCAGCTTTTACTGAGTGTTT
TTTTATTTATTTTTCAGCTATTACAGATTGGATGGTATTGGGGACAAAGA
TCATTGGTATTCTTTCATTGAAGATTTTGCGATTCTAGAACCTAATTCTA
TTCACGATTTCTTCAAAGACAAGGAAAGTCTTTCCTTAGAAATACACTGT
GATTTAATATCTGCGTTACCAAACATACACTCTTGGACCAATGATTCCAA
CAGCGGAGTTAAAAAAGAGCATTGCTTTATCCCTACTGGTCGATCACCTC
GTAATATTATTTTAGACGTAATGGATAAAGACATTCATAATAATTTTATC
ATAAAAATACTTTGTTATGTGTTGGATGGTGCCTATCATCTCAAGAAGAA
ACCAAATCTTCAGAAGAAAGTAAGTAAACAGAATAGTCTTCTTTCCCTGT
TGAATGTATATATTTTTATTCGTGAATTCTATTATTGTATTTCTATCAAA
TTTAGCTTTTCTTTTTACAATGTTCTTTCTTATTTTCCAGCCAAAACCAA
AAAGATTGTCGTTAACTAAAAAGCCAAGAAAGACTCTCACTCAAGCCCAA
CTATTGGATGAATTAGACCTTCCAGAGGATACCTTTGATGCTCCAACGAT
GATGAAACCTTCTCCATATTTAGATTTCAAACACAGTCTTTTCAATGATG
GTACTATCCTTTGGAGAGAGAATACAATCAATAGACAAGTGGTTGTAATG
AATGATTACGACTCCCTTACTGGTATATTTAAGGTAAGATTATATTTTAC
AAAATTACATTAGTGAATACTAGGCGGTTCCCGTCGTCGCAAAAGCCGGT
TTAGCTTGCGCATCAAAAGCCCTTGGAATGATAAAGATGGTATAGTTCAT
GCTCTCTAATTCTATCTTTAAGGGGAATCTGAATTTGTTTTCATCAACGA
TGGGGGTACATCGAGTAGTAGAAAGATTTCTCGTAAATGAAAAACTATCA
AGGTGCTAATTTTCTCGCTCAATTATGGATGAAAAAATTAAGATTAGTGA
ATATCCTTATGAGGTAGAGATTGCAGATTTGCCTCAAGTCAAAATTTGCT
TGTACATATTGATGTATAGACTGATCCTAATAAACAACAACCCCAACATC
TATATACTAGCCCATATAAAAGTACCGCAAGTGATTCAAAATCTAATATT
TGCAATTCTAGTACATAGAGACCCAAATCTATAATGACTTATTATAATGT
GACTTTACTGATGTAAATTTCGAGGCATTTTAGGCTAACATCTTTTAAAA
TGTTCTTTCAGTTTAATGACTTTGCTATGATAACCCGCACAATTCGTCGA
AACTCGATGATCCATCTCGTATGCACTTGTGACACCTTCCGAACACTTTC
TTCAGTTGTTAAATCATCTGATTGGGATGGTGTCAAATGCTGTCATATCC
AAGCTATCAAAGACATTTATAGCGAGGTAGGGATTGATACCATGCTTAGC
CAAATCACCAGGCACCTAACAATCTTCTCAGTAATTAAACTCACGGAAAA
AGCTCTTGATTTTGATCAGTCAGTTATTATTTGATCCATATTTAGTTGAT
TTTGCTTTTCGTCAAATAGTTTTTCCATCTTAAAATCATCAATATTTCTT
TTTCTTCGTAGTTCAAAATTTCTGTGAAGCCTCATGAAGCATTTGCTACT
CATAGCTATTCAATTCCACCAGCCTCCGTTGCAAGTGAAAATGCTTTGGC
CAAACGTATAGAAAAAGGATTGCAAGCATATAGTGAAGATGTCATGGTTC
TGGACAGTGTAAATGTGGAGAAATTTTCAGTTCGTTCCTCAATCGGCCAT
CATTTCGTTCACGTTTTCAAATCAAATCAAGATGATCGAGTATTTGTGGC
TTGTCAATCTGGAATATGCTCTAAGCGATATCGAAAACTGGTCAATTTCT
GCACGATGGATGAAGTCGCTTTATGTGCGCACTTAACTGTTTTCAAATCA
TACCTGGATTGTAACTGGAAAAAGCATCGTCTTCTGCGAATCTTGCGCTG
GCAGAATATTCCGGATGATGGTACCGCCATGGACGATAAAGACGAGGTTG
AAGAAAAAGAAGAGGAAGAAGATGAGGTCGAAAACGAGTTTGAAATGGAG
CTTGAAAAAGAGCTTGCTTCCGAAAACTCTAAATCGTCTAAGGTAAAGTT
CTACGCTCTCAATTTTCCATTACAGACATCATCAAATATTTT

Coding sequence (CDS) from alignment at sc0001839:18300..23041-

>TCONS_00038391 ID=TCONS_00038391|Name=TCONS_00038391|organism=Clytia hemisphaerica|type=CDS|length=4344bp|location=Sequence derived from alignment at sc0001839:18300..23041- (Clytia hemisphaerica)
TTCAAAATTTCTGTGAAGCCTCATGAAGCATTTGCTACTCATAGCTATTC
AATTCCACCAGCCTCCGTTGCAAGTGAAAATGCTTTGGCCAAACGTATAG
AAAAAGGATTGCAAGCATATAGTGAAGATGTCATGGTTCTGGACAGTGTA
AATGTGGAGAAATTTTCAGTTCGTTCCTCAATCGGCCATCATTTCGTTCA
CGTTTTCAAATCAAATCAAGATGATCGAGTATTTGTGGCTTGTCAATCTG
GAATATGCTCTAAGCGATATCGAAAACTGGTCAATTTCTGCACGATGGAT
GAAGTCGCTTTATGTGCGCACTTAACTGTTTTCAAATCATACCTGGATTG
TAACTGGAAAAAGCATCGTCTTCTGCGAATCTTGCGCTGGCAGAATATTC
CGGATGATGGTACCGCCATGGACGATAAAGACGAGGTTGAAGAAAAAGAA
GAGGAAGAAGATGAGGTCGAAAACGAGTTTGAAATGGAGCTTGAAAAAGA
GCTTGCTTCCGAAAACTCTAAATCGTCTAAGGTAAAGTTCTACGCTCTCA
ATTTTCCATTACAGACATCATCAAATATTTTTAATGACTTTGCTATGATA
ACCCGCACAATTCGTCGAAACTCGATGATCCATCTCGTATGCACTTGTGA
CACCTTCCGAACACTTTCTTCAGTTGTTAAATCATCTGATTGGGATGGTG
TCAAATGCTGTCATATCCAAGCTATCAAAGACATTTATAGCGAGCCAAAA
CCAAAAAGATTGTCGTTAACTAAAAAGCCAAGAAAGACTCTCACTCAAGC
CCAACTATTGGATGAATTAGACCTTCCAGAGGATACCTTTGATGCTCCAA
CGATGATGAAACCTTCTCCATATTTAGATTTCAAACACAGTCTTTTCAAT
GATGGTACTATCCTTTGGAGAGAGAATACAATCAATAGACAAGTGGTTGT
AATGAATGATTACGACTCCCTTACTGGTATATTTAAGATGGATAAAGACA
TTCATAATAATTTTATCATAAAAATACTTTGTTATGTGTTGGATGGTGCC
TATCATCTCAAGAAGAAACCAAATCTTCAGAAGAAATTCAAAATTTCTGT
GAAGCCTCATGAAGCATTTGCTACTCATAGCTATTCAATTCCACCAGCCT
CCGTTGCAAGTGAAAATGCTTTGGCCAAACGTATAGAAAAAGGATTGCAA
GCATATAGTGAAGATGTCATGGTTCTGGACAGTGTAAATGTGGAGAAATT
TTCAGTTCGTTCCTCAATCGGCCATCATTTCGTTCACGTTTTCAAATCAA
ATCAAGATGATCGAGTATTTGTGGCTTGTCAATCTGGAATATGCTCTAAG
CGATATCGAAAACTGGTCAATTTCTGCACGATGGATGAAGTCGCTTTATG
TGCGCACTTAACTGTTTTCAAATCATACCTGGATTGTAACTGGAAAAAGC
ATCGTCTTCTGCGAATCTTGCGCTGGCAGAATATTCCGGATGATGGTACC
GCCATGGACGATAAAGACGAGGTTGAAGAAAAAGAAGAGGAAGAAGATGA
GGTCGAAAACGAGTTTGAAATGGAGCTTGAAAAAGAGCTTGCTTCCGAAA
ACTCTAAATCGTCTAAGGTAAAGTTCTACGCTCTCAATTTTCCATTACAG
ACATCATCAAATATTTTTAATGACTTTGCTATGATAACCCGCACAATTCG
TCGAAACTCGATGATCCATCTCGTATGCACTTGTGACACCTTCCGAACAC
TTTCTTCAGTTGTTAAATCATCTGATTGGGATGGTGTCAAATGCTGTCAT
ATCCAAGCTATCAAAGACATTTATAGCGAGCCAAAACCAAAAAGATTGTC
GTTAACTAAAAAGCCAAGAAAGACTCTCACTCAAGCCCAACTATTGGATG
AATTAGACCTTCCAGAGGATACCTTTGATGCTCCAACGATGATGAAACCT
TCTCCATATTTAGATTTCAAACACAGTCTTTTCAATGATGGTACTATCCT
TTGGAGAGAGAATACAATCAATAGACAAGTGGTTGTAATGAATGATTACG
ACTCCCTTACTGGTATATTTAAGATGGATAAAGACATTCATAATAATTTT
ATCATAAAAATACTTTGTTATGTGTTGGATGGTGCCTATCATCTCAAGAA
GAAACCAAATCTTCAGAAGAAATTCAAAATTTCTGTGAAGCCTCATGAAG
CATTTGCTACTCATAGCTATTCAATTCCACCAGCCTCCGTTGCAAGTGAA
AATGCTTTGGCCAAACGTATAGAAAAAGGATTGCAAGCATATAGTGAAGA
TGTCATGGTTCTGGACAGTGTAAATGTGGAGAAATTTTCAGTTCGTTCCT
CAATCGGCCATCATTTCGTTCACGTTTTCAAATCAAATCAAGATGATCGA
GTATTTGTGGCTTGTCAATCTGGAATATGCTCTAAGCGATATCGAAAACT
GGTCAATTTCTGCACGATGGATGAAGTCGCTTTATGTGCGCACTTAACTG
TTTTCAAATCATACCTGGATTGTAACTGGAAAAAGCATCGTCTTCTGCGA
ATCTTGCGCTGGCAGAATATTCCGGATGATGGTACCGCCATGGACGATAA
AGACGAGGTTGAAGAAAAAGAAGAGGAAGAAGATGAGGTCGAAAACGAGT
TTGAAATGGAGCTTGAAAAAGAGCTTGCTTCCGAAAACTCTAAATCGTCT
AAGGTAAAGTTCTACGCTCTCAATTTTCCATTACAGACATCATCAAATAT
TTTTAATGACTTTGCTATGATAACCCGCACAATTCGTCGAAACTCGATGA
TCCATCTCGTATGCACTTGTGACACCTTCCGAACACTTTCTTCAGTTGTT
AAATCATCTGATTGGGATGGTGTCAAATGCTGTCATATCCAAGCTATCAA
AGACATTTATAGCGAGCCAAAACCAAAAAGATTGTCGTTAACTAAAAAGC
CAAGAAAGACTCTCACTCAAGCCCAACTATTGGATGAATTAGACCTTCCA
GAGGATACCTTTGATGCTCCAACGATGATGAAACCTTCTCCATATTTAGA
TTTCAAACACAGTCTTTTCAATGATGGTACTATCCTTTGGAGAGAGAATA
CAATCAATAGACAAGTGGTTGTAATGAATGATTACGACTCCCTTACTGGT
ATATTTAAGATGGATAAAGACATTCATAATAATTTTATCATAAAAATACT
TTGTTATGTGTTGGATGGTGCCTATCATCTCAAGAAGAAACCAAATCTTC
AGAAGAAATTCAAAATTTCTGTGAAGCCTCATGAAGCATTTGCTACTCAT
AGCTATTCAATTCCACCAGCCTCCGTTGCAAGTGAAAATGCTTTGGCCAA
ACGTATAGAAAAAGGATTGCAAGCATATAGTGAAGATGTCATGGTTCTGG
ACAGTGTAAATGTGGAGAAATTTTCAGTTCGTTCCTCAATCGGCCATCAT
TTCGTTCACGTTTTCAAATCAAATCAAGATGATCGAGTATTTGTGGCTTG
TCAATCTGGAATATGCTCTAAGCGATATCGAAAACTGGTCAATTTCTGCA
CGATGGATGAAGTCGCTTTATGTGCGCACTTAACTGTTTTCAAATCATAC
CTGGATTGTAACTGGAAAAAGCATCGTCTTCTGCGAATCTTGCGCTGGCA
GAATATTCCGGATGATGGTACCGCCATGGACGATAAAGACGAGGTTGAAG
AAAAAGAAGAGGAAGAAGATGAGGTCGAAAACGAGTTTGAAATGGAGCTT
GAAAAAGAGCTTGCTTCCGAAAACTCTAAATCGTCTAAGGTAAAGTTCTA
CGCTCTCAATTTTCCATTACAGACATCATCAAATATTTTTAATGACTTTG
CTATGATAACCCGCACAATTCGTCGAAACTCGATGATCCATCTCGTATGC
ACTTGTGACACCTTCCGAACACTTTCTTCAGTTGTTAAATCATCTGATTG
GGATGGTGTCAAATGCTGTCATATCCAAGCTATCAAAGACATTTATAGCG
AGCCAAAACCAAAAAGATTGTCGTTAACTAAAAAGCCAAGAAAGACTCTC
ACTCAAGCCCAACTATTGGATGAATTAGACCTTCCAGAGGATACCTTTGA
TGCTCCAACGATGATGAAACCTTCTCCATATTTAGATTTCAAACACAGTC
TTTTCAATGATGGTACTATCCTTTGGAGAGAGAATACAATCAATAGACAA
GTGGTTGTAATGAATGATTACGACTCCCTTACTGGTATATTTAAGATGGA
TAAAGACATTCATAATAATTTTATCATAAAAATACTTTGTTATGTGTTGG
ATGGTGCCTATCATCTCAAGAAGAAACCAAATCTTCAGAAGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022986XLOC_022986Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038391-exon-sc0001839-1575043694:22881..23041TCONS_00038391-exon-sc0001839-1575043694:22881..23041Clytia hemisphaericaexon
TCONS_00038391-exon-sc0001839-1575043694:21552..22175TCONS_00038391-exon-sc0001839-1575043694:21552..22175Clytia hemisphaericaexon
TCONS_00038391-exon-sc0001839-1575043694:21296..21459TCONS_00038391-exon-sc0001839-1575043694:21296..21459Clytia hemisphaericaexon
TCONS_00038391-exon-sc0001839-1575043694:20729..20912TCONS_00038391-exon-sc0001839-1575043694:20729..20912Clytia hemisphaericaexon
TCONS_00038391-exon-sc0001839-1575043694:20123..20474TCONS_00038391-exon-sc0001839-1575043694:20123..20474Clytia hemisphaericaexon
TCONS_00038391-exon-sc0001839-1575043694:19759..20001TCONS_00038391-exon-sc0001839-1575043694:19759..20001Clytia hemisphaericaexon
TCONS_00038391-exon-sc0001839-1575043694:19066..19230TCONS_00038391-exon-sc0001839-1575043694:19066..19230Clytia hemisphaericaexon
TCONS_00038391-exon-sc0001839-1575043694:18300..18880TCONS_00038391-exon-sc0001839-1575043694:18300..18880Clytia hemisphaericaexon
TCONS_00038391-exon-sc0001839-1510915933:22881..23041TCONS_00038391-exon-sc0001839-1510915933:22881..23041Clytia hemisphaericaexon
TCONS_00038391-exon-sc0001839-1510915933:21552..22175TCONS_00038391-exon-sc0001839-1510915933:21552..22175Clytia hemisphaericaexon
TCONS_00038391-exon-sc0001839-1510915933:21296..21459TCONS_00038391-exon-sc0001839-1510915933:21296..21459Clytia hemisphaericaexon
TCONS_00038391-exon-sc0001839-1510915933:20729..20912TCONS_00038391-exon-sc0001839-1510915933:20729..20912Clytia hemisphaericaexon
TCONS_00038391-exon-sc0001839-1510915933:20123..20474TCONS_00038391-exon-sc0001839-1510915933:20123..20474Clytia hemisphaericaexon
TCONS_00038391-exon-sc0001839-1510915933:19759..20001TCONS_00038391-exon-sc0001839-1510915933:19759..20001Clytia hemisphaericaexon
TCONS_00038391-exon-sc0001839-1510915933:19066..19230TCONS_00038391-exon-sc0001839-1510915933:19066..19230Clytia hemisphaericaexon
TCONS_00038391-exon-sc0001839-1510915933:18300..18880TCONS_00038391-exon-sc0001839-1510915933:18300..18880Clytia hemisphaericaexon
TCONS_00038391-exon-sc0001839-1491911889:22881..23041TCONS_00038391-exon-sc0001839-1491911889:22881..23041Clytia hemisphaericaexon
TCONS_00038391-exon-sc0001839-1491911889:21552..22175TCONS_00038391-exon-sc0001839-1491911889:21552..22175Clytia hemisphaericaexon
TCONS_00038391-exon-sc0001839-1491911889:21296..21459TCONS_00038391-exon-sc0001839-1491911889:21296..21459Clytia hemisphaericaexon
TCONS_00038391-exon-sc0001839-1491911889:20729..20912TCONS_00038391-exon-sc0001839-1491911889:20729..20912Clytia hemisphaericaexon
TCONS_00038391-exon-sc0001839-1491911889:20123..20474TCONS_00038391-exon-sc0001839-1491911889:20123..20474Clytia hemisphaericaexon
TCONS_00038391-exon-sc0001839-1491911889:19759..20001TCONS_00038391-exon-sc0001839-1491911889:19759..20001Clytia hemisphaericaexon
TCONS_00038391-exon-sc0001839-1491911889:19066..19230TCONS_00038391-exon-sc0001839-1491911889:19066..19230Clytia hemisphaericaexon
TCONS_00038391-exon-sc0001839-1491911889:18300..18880TCONS_00038391-exon-sc0001839-1491911889:18300..18880Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038391-proteinTCONS_00038391-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001839supercontigsc0001839:18300..23041 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.97977	2.63073	0.862335	0.787997	7.01709	6.22805	11.8066	13.1133	15.7984	11.761	15.0529	21.6481	10.6081	11.3235	5.90769	8.98921	7.9362	10.0776	5.76046	4.66259	8.51373	8.82835	3.71724	5.07361	11.1305	13.2059	4.62103	1.55683	4.39106	3.49703
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR007527Znf_SWIM
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00038391 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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