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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038362 ID=TCONS_00038362|Name=TCONS_00038362|organism=Clytia hemisphaerica|type=transcript|length=1142bp
ggGGACACAATCGATGCAATCAGAAGATAGAAATAATACAAtatttttgc
tctaaaagataATTATAGCTATATACGGAATATATGGAAAAGTCTCAGAT
TCATATGAGAATTTAGGTACTAAGACCTTTTCTCAAAGACACTTCagctt
ttttagaaattttattctcAGTTTGTTTTAGTTTAGCAGCTTGAATCCAT
GCTGTAACAAAGGATCGTATGCGTAAATTGacccattttttcaaaattat
ttcctTCAACATGGCTCTAAGTTTTTCATTTNTAATCATCCTGCTTAATG
AGGCCCATGTACCTTCAATGAAGGTGCTTTTCATGAGCTTCTCTAAAATC
AGGTCTCTCAAGTCCTCTCCACGGTAATTTTCGATTAATGCAACATTCAA
GACTTCACGTACAGCTATCTCGATTCTTTTTATGAACACATAAAAAGGTT
CTTTCACAATCATCAATCCCCCACGATTTATTCGATTTGTCCATGATAGC
GTATACTCGTAAAAATCACTTGTATCTTCATTGTCACCATCAAGACACCA
TGCATTGACTACTTGAAGAGCAGCCCTCTTAAGATTCGACTCTTTCACCC
gtgaaaacctttttttgaggGAATAGGGAATAAAACCACTCACATATCTG
AGGACCTTTTCCTCTTCAGGTGATAAGCTTAGTTTAGTATGGTCAACTTC
AGAGATTTCAATGAGTTTATCGTTTTTCCATTTCAGAATCaaagataatg
tttttgttACCATGAAGGTGTAAAGAATATCAAATCCTTCGTTCAATTGT
AGCTTATCGAATATTGCCCTGAATTTACTCCTTCCGGATTTGCTAACACT
GACTTGAGAAAACTTTGTGCATCCTATTTGTCTAGCCTCTGAACAGTAGT
CGGTGTTCACACAGGGGATTAAAAGGTCTTGAATGTGTGCAGCAAAATCT
GAGATTTCTTTGGAAACACTCTCAGATTTCTCCTGTATTATTTTCGCTGA
TTTAACGGCATAATTTCCTGGAGTCAGCACTTCTTCATGTCTGAGGTTTA
GGATCTTATCATTGATTGCCAAATCCAATGCTATTGAGAAATGATTCCCT
GCTTCTGCTTGTAAGGGTACCAGCTCTTGTCGATTTAGcact Run BLAST on NCBI transcript from alignment at sc0001833:28003..29207- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038362 ID=TCONS_00038362|Name=TCONS_00038362|organism=Clytia hemisphaerica|type=transcript|length=1205bp|location=Sequence derived from alignment at sc0001833:28003..29207- (Clytia hemisphaerica)
GGGGACACAATCGATGCAATCAGAAGATAGAAATAATACAATATTTTTGC
TCTAAAAGATAATTATAGCTATATACGGAATATATGGAAAAGTCTCAGAT
TCATATGAGAATTTAGGTACTAAGACCTTTTCTCAAAGACACTTCAGCTT
TTTTAGAAATTTTATTCTCAGTTTGTTTTAGTTTAGCAGCTTGAATCCAT
GCTGTAACAAAGGATCGTATGCGTAAATTGACCCATTTTTTCAAAATTAT
TTCCTTCAACATGGCTCTAAGTTTTTCATTTNTGCGTAAATTGACCCATT
TTTTCAAAAATTTTTCCTTCAACATGACTCTAAGTTTTTCATTCAGAATC
ATCCTGCTTAATGAGGCCCATGTACCTTCAATGAAGGTGCTTTTCATGAG
CTTCTCTAAAATCAGGTCTCTCAAGTCCTCTCCACGGTAATTTTCGATTA
ATGCAACATTCAAGACTTCACGTACAGCTATCTCGATTCTTTTTATGAAC
ACATAAAAAGGTTCTTTCACAATCATCAATCCCCCACGATTTATTCGATT
TGTCCATGATAGCGTATACTCGTAAAAATCACTTGTATCTTCATTGTCAC
CATCAAGACACCATGCATTGACTACTTGAAGAGCAGCCCTCTTAAGATTC
GACTCTTTCACCCGTGAAAACCTTTTTTTGAGGGAATAGGGAATAAAACC
ACTCACATATCTGAGGACCTTTTCCTCTTCAGGTGATAAGCTTAGTTTAG
TATGGTCAACTTCAGAGATTTCAATGAGTTTATCGTTTTTCCATTTCAGA
ATCAAAGATAATGTTTTTGTTACCATGAAGGTGTAAAGAATATCAAATCC
TTCGTTCAATTGTAGCTTATCGAATATTGCCCTGAATTTACTCCTTCCGG
ATTTGCTAACACTGACTTGAGAAAACTTTGTGCATCCTATTTGTCTAGCC
TCTGAACAGTAGTCGGTGTTCACACAGGGGATTAAAAGGTCTTGAATGTG
TGCAGCAAAATCTGAGATTTCTTTGGAAACACTCTCAGATTTCTCCTGTA
TTATTTTCGCTGATTTAACGGCATAATTTCCTGGAGTCAGCACTTCTTCA
TGTCTGAGGTTTAGGATCTTATCATTGATTGCCAAATCCAATGCTATTGA
GAAATGATTCCCTGCTTCTGCTTGTAAGGGTACCAGCTCTTGTCGATTTA
GCACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038362-exon-sc0001833-1575043694:28925..29207 | TCONS_00038362-exon-sc0001833-1575043694:28925..29207 | Clytia hemisphaerica | exon |
| TCONS_00038362-exon-sc0001833-1575043694:28003..28861 | TCONS_00038362-exon-sc0001833-1575043694:28003..28861 | Clytia hemisphaerica | exon |
| TCONS_00038362-exon-sc0001833-1510915933:28925..29207 | TCONS_00038362-exon-sc0001833-1510915933:28925..29207 | Clytia hemisphaerica | exon |
| TCONS_00038362-exon-sc0001833-1510915933:28003..28861 | TCONS_00038362-exon-sc0001833-1510915933:28003..28861 | Clytia hemisphaerica | exon |
| TCONS_00038362-exon-sc0001833-1491911889:28925..29207 | TCONS_00038362-exon-sc0001833-1491911889:28925..29207 | Clytia hemisphaerica | exon |
| TCONS_00038362-exon-sc0001833-1491911889:28003..28861 | TCONS_00038362-exon-sc0001833-1491911889:28003..28861 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001833 | supercontig | sc0001833:28003..29207 - |
Blast
The following BLAST results are available for this feature:
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