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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038305 ID=TCONS_00038305|Name=TCONS_00038305|organism=Clytia hemisphaerica|type=transcript|length=1315bp
GGTTACATCGTCCCGttttcttgaacaatttttcgccaGCTCGATCCCCC
CAGCCTCGTGAAGCAACATAGGCTCCCTTCGGGAGCAATTACTATCATCT
CTAAAACTATGTTAAGTCTGGTTTATTACATCTCTCGTCGATAACTTCTG
TTCCGAAATACCCCTGGTTCACACATGTCAAAATCTCCTAGAAAATTCGC
TCTCAAAATACCATAAAATTCCACCACTTTCCAATCAATTGTTACCATGC
TTGTTATCAGCTTGTTATACCTCTCCTAAGAGATTTCCTTACCAAAATAC
CACTgtttttataaatgaaatagTCCCACTTCTCTCGACACTTGTATTTC
TTGCCACATCTAGAAAATTCAGTTTCAAAATACCACTGAATTTTCTCAAC
CACCTCACTCTTCAAAGCTTCACGGTTTGCAACAACCCTCCGGGAAAACT
CACTTCAAAGATACCATCATTCATTACCACGCTCTCCGCAGTTTTTTGTT
TACCACATCTGTTTGCCACATTCACTCCCTCCAAAATACTCTGTTTGTTA
CACCTCTACTCAAAGAATCACGGTGGTAGTTCTATCTCAAAGTACCACTA
TTTATCAATAGATAATTGCCATGGTTTCCTAATCTCCTCGAAAGGATTCA
TCCTCAAAATACGATTATATTTCTCAATGAATTATTACCAGTTATCTTAA
CAGTTCCACAGTTTCCCGCATCTCTGCTAGAAAATTCAGTCCGAAAATAG
CACTGGTTTTCTCAATAAATAATGACCACGTTGTCAAAAGTTTCATGGTT
TGCCAACCTTTCTTAGAAAACTTACTTCAAATATACCACCGGTTCTCTCA
GCTCAGTTAATAACTACCATGCTCACCAAATTTTATCGGTTTCCAGAGTA
TGCCTTTTCAGAGTATGCCTTTTCAGAATATCCCTTTCCGAGATGGCATT
TCCATGGAACCCACTTTAAAAATTCCACCAATTTCAAGTTGACTACTATA
ACATACTCACCAAAGTTTTCTGTTTGTTACACCTTTCCTCAAATCAAAGA
TTTCGTTGCCAAAATACCACTATTTCTAAATGAAATCTTCCCACGTCTCC
CAAAAGTTGTATGGCTTGCCCACCAAGATAATTCACTCCCAAAACACCAC
TAGATCTCTCTCAGCAGGTTCACGATTTGCAGCACCCCCGCCGGGAAAAC
TCAATTCAAAGATACCACCAGTCATACCACGCTCTCCGCAGTTTTTTGTT
TACCACATCTGTTTGCCACATTCACTCCCTCCAAAATACTCTGTTTGTTA
CACCTCTCCTCAAAG Run BLAST on NCBI transcript from alignment at sc0001822:7255..8569 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038305 ID=TCONS_00038305|Name=TCONS_00038305|organism=Clytia hemisphaerica|type=transcript|length=1315bp|location=Sequence derived from alignment at sc0001822:7255..8569 (Clytia hemisphaerica)
CTTTGAGGAGAGGTGTAACAAACAGAGTATTTTGGAGGGAGTGAATGTGG
CAAACAGATGTGGTAAACAAAAAACTGCGGAGAGCGTGGTATGACTGGTG
GTATCTTTGAATTGAGTTTTCCCGGCGGGGGTGCTGCAAATCGTGAACCT
GCTGAGAGAGATCTAGTGGTGTTTTGGGAGTGAATTATCTTGGTGGGCAA
GCCATACAACTTTTGGGAGACGTGGGAAGATTTCATTTAGAAATAGTGGT
ATTTTGGCAACGAAATCTTTGATTTGAGGAAAGGTGTAACAAACAGAAAA
CTTTGGTGAGTATGTTATAGTAGTCAACTTGAAATTGGTGGAATTTTTAA
AGTGGGTTCCATGGAAATGCCATCTCGGAAAGGGATATTCTGAAAAGGCA
TACTCTGAAAAGGCATACTCTGGAAACCGATAAAATTTGGTGAGCATGGT
AGTTATTAACTGAGCTGAGAGAACCGGTGGTATATTTGAAGTAAGTTTTC
TAAGAAAGGTTGGCAAACCATGAAACTTTTGACAACGTGGTCATTATTTA
TTGAGAAAACCAGTGCTATTTTCGGACTGAATTTTCTAGCAGAGATGCGG
GAAACTGTGGAACTGTTAAGATAACTGGTAATAATTCATTGAGAAATATA
ATCGTATTTTGAGGATGAATCCTTTCGAGGAGATTAGGAAACCATGGCAA
TTATCTATTGATAAATAGTGGTACTTTGAGATAGAACTACCACCGTGATT
CTTTGAGTAGAGGTGTAACAAACAGAGTATTTTGGAGGGAGTGAATGTGG
CAAACAGATGTGGTAAACAAAAAACTGCGGAGAGCGTGGTAATGAATGAT
GGTATCTTTGAAGTGAGTTTTCCCGGAGGGTTGTTGCAAACCGTGAAGCT
TTGAAGAGTGAGGTGGTTGAGAAAATTCAGTGGTATTTTGAAACTGAATT
TTCTAGATGTGGCAAGAAATACAAGTGTCGAGAGAAGTGGGActatttca
tttataaaaacAGTGGTATTTTGGTAAGGAAATCTCTTAGGAGAGGTATA
ACAAGCTGATAACAAGCATGGTAACAATTGATTGGAAAGTGGTGGAATTT
TATGGTATTTTGAGAGCGAATTTTCTAGGAGATTTTGACATGTGTGAACC
AGGGGTATTTCGGAACAGAAGTTATCGACGAGAGATGTAATAAACCAGAC
TTAACATAGTTTTAGAGATGATAGTAATTGCTCCCGAAGGGAGCCTATGT
TGCTTCACGAGGCTGGGGGGATCGAGCtggcgaaaaattgttcaagaaaa
CGGGACGATGTAACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038305-exon-sc0001822-1491911889:7255..8569 | TCONS_00038305-exon-sc0001822-1491911889:7255..8569 | Clytia hemisphaerica | exon |
| TCONS_00038305-exon-sc0001822-1510915933:7255..8569 | TCONS_00038305-exon-sc0001822-1510915933:7255..8569 | Clytia hemisphaerica | exon |
| TCONS_00038305-exon-sc0001822-1575043694:7255..8569 | TCONS_00038305-exon-sc0001822-1575043694:7255..8569 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001822 | supercontig | sc0001822:7255..8569 . |
Blast
The following BLAST results are available for this feature:
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