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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038296 ID=TCONS_00038296|Name=TCONS_00038296|organism=Clytia hemisphaerica|type=transcript|length=801bp
CCGAAAGTGTTTACTGATGTTTGCTTTATTCATTTTCGTTCCTTATTGTA
TACAAGGTCATCATTGACATAAGGGAACATTTTTCAAGAATAGCCCTGTA
TTGCCAAGACAAAATTTTAGCTATCTTGCAGCGGTTATTTTACagtattt
tatttatattttgttttgttgctaatcacccctgtgtcacagacccagtg
ggaccCCATTCcaactgaaaaatttggcaaaaacttgTTCCCTGGTGGGA
AAAGACCCTAGAACTTTAGCTCCACTGGGAAATCAATGTCTAAAGATTAC
ATTCCAAAAtgttttaaccttggaacaagaacaataaaatttctatcccc
attgggatttcaatggggatttttatccccacttaagaagaaaaagttcc
accggggctgcgagacaggggtgttcttaATTAATAGCTTTTTTTATAGC
TTTTTCAGGTGACGCCCTAGAAATGAGGCCATTGTGGTGAAGAAACACGT
CTAAATTGACACCCACTACCAAAAACTTCGGATTCGAACAATTGCAATTG
AAGTTAACCTGATCAATCTGATGCGACTTTCTCATTCCAACAAAATTAGA
AGTAGGAATCTGTCCAATCAAGGAACTTGGTTCAATCAGGCTATCACAGC
GTCACACCAATGGATATTTCATGAATGTCTTCATGTGTGATCTCGTTTTG
TCCCAGAAAAGTCACATATCGAAAATCTGCAAGGCATGATGACCAACCAG
TTCGAAGTAATGTGTGACATTTGCATTTGGTACAGAGGTGAGAttaatat
t Run BLAST on NCBI transcript from alignment at sc0001822:3696..4823- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038296 ID=TCONS_00038296|Name=TCONS_00038296|organism=Clytia hemisphaerica|type=transcript|length=1128bp|location=Sequence derived from alignment at sc0001822:3696..4823- (Clytia hemisphaerica)
CCGAAAGTGTTTACTGATGTTTGCTTTATTCATTTTCGTTCCTTATTGTA
TACAAGGTCATCATTGACATAAGGGAACATTTTTCAAGAATAGCCCTGTA
TTGCCAAGACAAAATTTTAGCTATCTTGCAGCGGTTATTTTACAGTATTT
TATTTATATTTTGTTTTGTTGCTAATCACCCCTGTGTCACAGACCCAGTG
GGACCCCATTCCAACTGAAAAATTTGGCAAAAACTTGTTCCCTGGTGGGA
AAAGACCCTAGAACTTTAGCTCCACTGGGAAATCAATGTCTAAAGATTAC
ATTCCAAAATGTTTTAACCTTGGAACAAGAACAATAAAATTTCTATCCCC
ATTGGGATTTCAATGGGGATTTTTATCCCCACTTAAGAAGAAAAAGTTCC
ACCGGGGCTGCGAGACAGGGGTGTTCTTAATTAATAGCTTTTTTTATAGC
TTTTTCAGGTGACGCCCTAGAAATGAGGCCATTGTGGTGAAGAAACACGT
CTAAATTGACACCCACTACCAAAAACTTCGGATTCGAACAATTGCAATTG
AAGTTAACCTGATCAATCTGATGCGACTTTCTCATTCCAACAAAATTAGA
AGTAGGTAAATGGCGTGGCTAGTTCTGGGAAATAATATATTTAGATGTTA
AAAATATCATCTGGACTCCGTCTGGACTAATAGAATCTCTTTGTGGCAAA
AACACTCTCCTTGTCACCCATTAAATGCTGGTGACCCCCTGAAAAGGCAC
GACAAGAAAACATAGTTTTAAATTCTGCTTCACTTTTTTTCGGGACACAA
TGTTTTGATATTTTTACTTTTGAATTATATCATTTGAGGTTATCACTCGG
CATCTAGGATTTAATCATACGCCAAATGAACTGTTCAACCTTGAGGCTTT
TTACGGAATCTCATGAATTTATTTTCTTCCAGGAATCTGTCCAATCAAGG
AACTTGGTTCAATCAGGCTATCACAGCGTCACACCAATGGATATTTCATG
AATGTCTTCATGTGTGATCTCGTTTTGTCCCAGAAAAGTCACATATCGAA
AATCTGCAAGGCATGATGACCAACCAGTTCGAAGTAATGTGTGACATTTG
CATTTGGTACAGAGGTGAGATTAATATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038296-exon-sc0001822-1575043694:4219..4823 | TCONS_00038296-exon-sc0001822-1575043694:4219..4823 | Clytia hemisphaerica | exon |
| TCONS_00038296-exon-sc0001822-1575043694:3696..3891 | TCONS_00038296-exon-sc0001822-1575043694:3696..3891 | Clytia hemisphaerica | exon |
| TCONS_00038296-exon-sc0001822-1510915933:4219..4823 | TCONS_00038296-exon-sc0001822-1510915933:4219..4823 | Clytia hemisphaerica | exon |
| TCONS_00038296-exon-sc0001822-1510915933:3696..3891 | TCONS_00038296-exon-sc0001822-1510915933:3696..3891 | Clytia hemisphaerica | exon |
| TCONS_00038296-exon-sc0001822-1491911889:4219..4823 | TCONS_00038296-exon-sc0001822-1491911889:4219..4823 | Clytia hemisphaerica | exon |
| TCONS_00038296-exon-sc0001822-1491911889:3696..3891 | TCONS_00038296-exon-sc0001822-1491911889:3696..3891 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001822 | supercontig | sc0001822:3696..4823 - |
Blast
The following BLAST results are available for this feature:
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