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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038279 ID=TCONS_00038279|Name=TCONS_00038279|organism=Clytia hemisphaerica|type=transcript|length=5944bp
atgaaagcagaGAAGCCAAtggagaaaatgaaagtgaaaaagaaaatgaa
ggagATTTTTATGAAAGTGACTCTGAGAACAAAGCAATATCCTATAAGCA
AGCTTATGTCAAAGATGTTTTGTCTGATATGTTTACATCGACAGCAACTA
AACTAATCAAGTGGGCATGCAGTGACACTACGAGTACACATCCTATATCa
ttcaaaaatgaaacaaagtcaaaatctaaaaatacattcaaatcaAAGAT
TGAGAAACGTTCTACACCCCACAATGGAAGGAGCTTTTTGAATGAGGCTG
GATTAACACATGAAACTGGACAGTGCCTGGTAGGGGGGACATTCCCTCGT
GATGGAATTTTCAAGCGGAAATTCAATGGAGTCTGCCATGAAATAGACGT
TCCATCAGGTTGGAGTAAGATACCTGTTATTGTCACGAAAAGAGATACAA
GGTGTTTTGGTGGAAATTGGACATCGTTATTGGTAGGAGCTATAAAAGAG
ATCAACCCATATTGCGTTTGGAAATTCACCTATAACTTCGTTAAAAAAGA
TGAATCACGAAAGTGGCGTAAAGGATATTTCACGGGTAAAGCAGAATGTA
AAATGGAAAACTGCAACTGTAAAGTAACGATATCACAAGACACAGAAGAA
TCGCAAAAACTCTGTTTACAATTTGATGGAGATGTCAAACACATTATGAA
TAAACCAAAGAAAAGACAGATACGTGGTAGCACCAGGAGGGAAGAAATAG
AGCAAGTGAAAACAAATCCAAAGGTCTCTGCAGCTGGAATTTATCGAAAA
AAGCTTAGCTCGATTGAAAAGGATGTCTTGCAGTCAGGTAATCGCGATGG
TGCTTCGTCTAAAAAGGTTCATCAAAAAATACGCGCAGAGGCAATGAAGG
AAATAAATTCACCAAATAATCTTTACGGCAACATCctcaaactgaaaaaa
tcaTTCGAACATGACGATAAAACAGAGGCTACGAGAAACAACCTTAAATT
CCGTCGCTTTTATGGTTTCATCCAAAGATTTGTGGTAgatgaaaaagaat
tgaaaattgttcttttctcGGAAGAAAATGTTCGAATCTATCATGACCTT
GCTGAAAGAGATATCGTTTGCTTCGATGCTACTGGGGGAATCGTAAAGAA
GATAAGAGggatgaaaaaaatctttctttatgCCATGGTAATGAAGAATC
CGTATAACAGTACAGTTGCTCTTCCTGTGGCTTCGTACATCACAAGCAAT
CACAATATAGAATCAATCAGTGTAATGTTGCTGACattgagagaaaaaga
gaaagaattGTTTGGTGATTTGTGTCAGCCTATTACTATTATGATCGACA
ACAGCAAAGTTTTACGTGCAGCAGTTCTCAAGGAACTCAATGGAGAGACT
TTTGTTGAATACTCAAATAAATTGTACCGATTCCTAGTCGAAGGCCAGAA
AATCGATTTCAAAACGCTGGTTTTCAGCTGCAGCAGTCATATACTCAAGC
AAGTAAAATTTCGATGTCATAAGCTATCACTTGGTTCAACAATATCTGTC
TTTATTTTGCATTGTATCGGAAGGATGATCATCACCGTTTCCTTAGATGA
ATTGACCACCATTGTCCAGCTTTTCAACAATGTTCTATCTGCAAAATCGA
TCAATCAACAGCTAGAAGTATCAGTTACAAATATTGAACGTTTAGTAAAC
GAGTTCAAAGATCATGAGTTGTATGAAGATTTCAGAAAAGTCGAAGAGGA
AGATGTCACCACTTACGAAGAAGAGGAACAAACCCAAGATAGCAACTCTG
ACTCTGAATTTGGCAACGGGATAAACGATAACTtggtgaagaaaaagaaa
acgaagaaaatgaagaagagtgGGAGGAAAAATGAATGGGTTGGGTATTG
GAATCGTACGCTAACGCTGAGTGAAGCAAAGAGATCAAACCAAAAAAACG
AGTACTACTCGCCGTCATTTCTGAGCTATTTTCGGAAGGAGATGCTTCCA
AAGGTAGTGATCTGGACAAagatttgttttaaaaatcttccGAAGTCTTC
AAATGCAAGTGTggagaattatttcaaatatgtGAAGTCAGAACACGATA
CCAACTTACCGGTTACTAATTTCATCCAACAATATAGAGAAAGAACCAAA
GAGCTTGCTATTGAGTATGGAGAAGAAATCATCAAAGGTGCTGGGAAGTT
CGGGGTAAGAGAAAACATCAACTTGGTCAAGATTGCTCAAAACGACGTTG
AAGATAACCATGTAAAAGTCGTGACGGAAAAATGGAATCGAAGATCAAAA
AGGAAGCATACCACTGGAAACAAGTTCCTCCATCCTTCAAAAAAGGCTAA
ATTTAATTATGTACAACAGGAAGCTCCGAAAAGGGAAACAAAGAATTCAG
GTAGAGGAGGAAAGCAAACAAAAACACACGAAACTGGAAAAGAAGATGTA
GCTACAGAAAGTCAAAGAAAAGAAGATGCAGAAGAAGATCAAGAAAGTAC
AAACGAAACAGCAGAAGTAGAGGAAGTATGCGAGGAGATTGGAAACGCTC
GTGACGTAATTAACGAAGAAATCAACTCGCAAGATACCACATTGCAAGGG
TGCTGTTCCCGGAATTTAGGGGATGTATTCATGGTGATCTGTTTTGACTG
TGAGAAGCGGTATCATGGACGTTGCCTAAGTTTTGATGCAGAGTTTTTGG
ATTTGGTGAAGATCTTTATTTGTAAATCATGTCAACAAAAGAACACACAT
GGTTTAgctaatttttttcattatcaGGCTAGGAAAACGGAGCCAATCGA
AAATTGGAAAGCTCTACTGGATAGTCTTGAAGCTGACACACTTGAAGTGT
TTGATGGCCACAAGTTCGTCCTTGAAGATGATATCATCACCGAAGAAATT
AAAGTAAAAAGCAAAATCGGCATCTTCAACAACCAAAGGAATTGTTGGTT
TTCTGCTGTTGTTCAAGCACTTTGTGGAACGTCTGCCAATTGTGTGTCAT
CGATGGATGGGAATCTGGCACATATTTGCGTACAACTGGAATTGATTCCA
TCCTCAAAGAATCCTGCTATTAATCTGGATAAAGAATATTCTGCACTGTG
TCATACATTGGGTGTTAAAGTTGGCAGAGACCAAAATCAAGATCCATCAG
AACTTCTGTTCAAATGGATTGAACAAATGTCGGAAATAAGCAAATTCCAA
TTGCACCCTATTACTGTTTCTAGGTGTAGATCTTGCAAAACGGTTCTCAA
GGTTGGACAACATGGTGGCGAAGAAAAATGCATGACTCTAACATTTCCCG
AAAATTGTCAACAAATAAAGGTATCAGACCTATTTTGGTACAATCTTGCT
AGCTTCGATTCTCTAGATTATGATGATGTTATGATGAATTGCAATTGCCC
AACCAACACTCTACGTAGTTTCACCGTGTTGCTCAACTCACCAGAATACC
TGATCGTTAAGTTTGATCGTACTCCACATCGGATTAAAGATCAGGTCAAT
ATGGTTCAGTCAAAGGTCGTACTAAACGAAATGATTGACCTATCCCCCTT
TtctacaaaatttcaaattcctgCAGCATATACTCTTTTTGCAACCATCA
ACTATGGTTACAATCAAAAGAGTGTCATGTCTAACCACTTCACCGCAACC
CTTTTCGACCACGCTGATGGAAAAGCCATTTGGTTTGACGATATTACAAC
CAGGAGATACACAATGAAGAAACGACTTAGTGACGAAAACTTTCAACAAA
CCCTTTACATTGCTCTATTCATTCGTTCATCTTGTGTCGGCGTGAAAATT
CCATACATCAATTATCCTTGGCATTTAAAATCGGCTGAAGTTTCATTAGT
TGAATCCGCCTTGTTCGGTGAACTCACAGAATCGATCATCACTAAAAGGC
AAGATTTGTTAACCTGTTCTGGTGATAACCTCCTCAATTGTGATGTTATT
TCAGCTTTCCTCAGAACCATCCCAAGACAAGACGACCCAAATGTAATAGT
CTGCTCTTCGTTTCTCATCGAATCTGTTATCGATGGAGTCCACTCGAACG
AGTACCAAAAATTTGAACATCGTGATTTCCTTGATTGTAATCTAATTATT
TTCCCCCTCAACAAAACTGGTAATCCTGGTCACTGGTCTATCATTGCTTT
ATACCCAAAGGCAAAGTCGATATTCCATCTCAGCTCAATCAAAGAGAACG
ATTCATCGGTTTTTCATCCAATCATTCATCTACTAAGACGGGCATATTCG
AGAATTGGCAAAGCATTTACAAGTTCCAGCTGGACGTTTTATCAACCTTG
GGAGATTCCGTCTCAGTCAGACGCTCATAGCTGTGGAGTTCTTGCCTGCA
TCAACGCATACAATATCATCAACAACAAATCGTTCGTGGTTTTTGACGAA
GAATTAACTCTGGTTAGGTACTGGATAATCTCGACTTGTTTAAATTCTGT
GATTAGTTTTCCCTCGAAAGATAAACCGGTTTCCAAACCTACAGAACCTG
CACAAACGTATAGTCGCATCGAGCCAATTCACTTTTTGTCTCAAACTTCA
AGCATCAATGTTTTcgataaaatctttgaaacagTTGCCGACAACCTAAT
TGGTGTTGAATCAGATTTAGATGCTGATGAAGATTCTGTTAACGACCAAG
ACAAATTCAAGGAAGTTGAAAATCCTCAAATCGACAAAAATCTACAAGCC
TTTTTGGATTCCGGTACCTACGTCAGCGAgatgaaaagaattttccttAC
CCCTTCTGTCAAAATCCTTTTGATGTTGTCACCTTTTACAAAACGaactc
aataaaaacaatttcaaaacaatggGAGCAGCTTTCAAATCTATACACCG
TTTCACACGACACAAGAGACGCAATCGGACTTCAGCTTCgaaaagaaatg
aatttttcaacttttggcgTCATGAATCGACACCCAATAGGAGACTTTTA
TTGTGATTTGATTTGTCCTGTTTTCCTGTTACTGTATTACAAAACTGTCC
AACAAACTGATCTGTTTACATCAGAGTGTACCCTTCTACCGGGACATCAA
TGGCACAAAAGAATTCTTCTAGAGGTAATAAGAATTCAATCATTCCATCT
TTTCTCCTTTGACCTTTCATTTACCAAGTACCACGTCACCCCCTACCTAT
TTCCCTTAATGTTAAAACATTAGAATCGactaacccagctggcacgcaac
gttgttttaacgttaatCTAATGTTCActacgttcatataacgttggatg
aatgttgtaacaacgttgtgtgccagatgGGAAAGTGCGAGTATAACGAG
TGTAAGgatgttaattttttgacattttatttaACCTTTATATTTCTTTG
TTCCCTACAGGAAGCTCAAAACAAAAACACTACATGCAAAATAAATCAAG
TAACAATCCAAGCTATTAGTAGGTCGCGTATACTCGAACAAAGGACACAC
GCTGTCATCATTCCTAAGAATGATGGAGATACGATTTCTGATGGTGACCC
TTGCGACAACATCAATTTTGACATAGATCCAGATAATTTACCATGCAGAG
TTTTGATATCCTTGAATAAAGCTTCTCTTTTTGATGCATTACCGAGGATC
CTTGAAGAATGCGAAAAAAAACAACTGGTATCGATTACCATTCCTTTGGC
TAACTTTGATGAAAGAATACTGAAAATGGTTTTCGACCAAAGCTACGGAA
CTGACAAATCGACCGAGATCTTTCGTTTTGCTTCACCAAGGCTGTCGAGG
ACAGACGCAGAAAAGATCATTAAGTATTTCAATAaccaatgaaatttttt
ttgatgggTTTAGTCCCAGAAACAAATTGTTCTCTAGAACAACAATTAGA
TATATTAGAAATTTACTTACTGGTCAACTTCAGATCTCATTATTTACATC
ATCAACAATTATTTTACCTTAAAACTCTTAACGATCTAGACGTG Run BLAST on NCBI protein sequence of TCONS_00038279-protein >TCONS_00038279-protein ID=TCONS_00038279-protein|Name=TCONS_00038279-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1600bp
ESREANGENESEKENEGDFYESDSENKAISYKQAYVKDVLSDMFTSTATK
LIKWACSDTTSTHPISFKNETKSKSKNTFKSKIEKRSTPHNGRSFLNEAG
LTHETGQCLVGGTFPRDGIFKRKFNGVCHEIDVPSGWSKIPVIVTKRDTR
CFGGNWTSLLVGAIKEINPYCVWKFTYNFVKKDESRKWRKGYFTGKAECK
MENCNCKVTISQDTEESQKLCLQFDGDVKHIMNKPKKRQIRGSTRREEIE
QVKTNPKVSAAGIYRKKLSSIEKDVLQSGNRDGASSKKVHQKIRAEAMKE
INSPNNLYGNILKLKKSFEHDDKTEATRNNLKFRRFYGFIQRFVVDEKEL
KIVLFSEENVRIYHDLAERDIVCFDATGGIVKKIRGMKKIFLYAMVMKNP
YNSTVALPVASYITSNHNIESISVMLLTLREKEKELFGDLCQPITIMIDN
SKVLRAAVLKELNGETFVEYSNKLYRFLVEGQKIDFKTLVFSCSSHILKQ
VKFRCHKLSLGSTISVFILHCIGRMIITVSLDELTTIVQLFNNVLSAKSI
NQQLEVSVTNIERLVNEFKDHELYEDFRKVEEEDVTTYEEEEQTQDSNSD
SEFGNGINDNLVKKKKTKKMKKSGRKNEWVGYWNRTLTLSEAKRSNQKNE
YYSPSFLSYFRKEMLPKVVIWTKICFKNLPKSSNASVENYFKYVKSEHDT
NLPVTNFIQQYRERTKELAIEYGEEIIKGAGKFGVRENINLVKIAQNDVE
DNHVKVVTEKWNRRSKRKHTTGNKFLHPSKKAKFNYVQQEAPKRETKNSG
RGGKQTKTHETGKEDVATESQRKEDAEEDQESTNETAEVEEVCEEIGNAR
DVINEEINSQDTTLQGCCSRNLGDVFMVICFDCEKRYHGRCLSFDAEFLD
LVKIFICKSCQQKNTHGLANFFHYQARKTEPIENWKALLDSLEADTLEVF
DGHKFVLEDDIITEEIKVKSKIGIFNNQRNCWFSAVVQALCGTSANCVSS
MDGNLAHICVQLELIPSSKNPAINLDKEYSALCHTLGVKVGRDQNQDPSE
LLFKWIEQMSEISKFQLHPITVSRCRSCKTVLKVGQHGGEEKCMTLTFPE
NCQQIKVSDLFWYNLASFDSLDYDDVMMNCNCPTNTLRSFTVLLNSPEYL
IVKFDRTPHRIKDQVNMVQSKVVLNEMIDLSPFSTKFQIPAAYTLFATIN
YGYNQKSVMSNHFTATLFDHADGKAIWFDDITTRRYTMKKRLSDENFQQT
LYIALFIRSSCVGVKIPYINYPWHLKSAEVSLVESALFGELTESIITKRQ
DLLTCSGDNLLNCDVISAFLRTIPRQDDPNVIVCSSFLIESVIDGVHSNE
YQKFEHRDFLDCNLIIFPLNKTGNPGHWSIIALYPKAKSIFHLSSIKEND
SSVFHPIIHLLRRAYSRIGKAFTSSSWTFYQPWEIPSQSDAHSCGVLACI
NAYNIINNKSFVVFDEELTLVRYWIISTCLNSVISFPSKDKPVSKPTEPA
QTYSRIEPIHFLSQTSSINVFDKIFETVADNLIGVESDLDADEDSVNDQD
KFKEVENPQIDKNLQAFLDSGTYVSEMKRIFLTPSVKILLMLSPFTKRTQ Run BLAST on NCBI transcript from alignment at sc0001818:5085..12453- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038279 ID=TCONS_00038279|Name=TCONS_00038279|organism=Clytia hemisphaerica|type=transcript|length=7369bp|location=Sequence derived from alignment at sc0001818:5085..12453- (Clytia hemisphaerica)
ATGAAAGCAGAGAAGCCAATGGAGAAAATGAAAGTGAAAAAGAAAATGAA
GGAGATTTTTATGAAAGTGACTCTGAGAACAAAGCAATATCCTATAAGCA
AGCTTATGTCAAAGATGTTTTGTCTGATATGTTTACATCGACAGCAACTA
AACTAATCAAGTGGGCATGCAGTGACACTACGAGTACACATCCTATATCA
TTCAAAAATGAAACAAAGTCAAAATCTAAAAATACATTCAAATCAAAGAT
TGAGAAACGTTCTACACCCCACAATGGAAGGAGCTTTTTGAATGAGGCTG
GATTAACACATGAAACTGGACAGTGCCTGGTAGGGGGGACATTCCCTCGT
GATGGAATTTTCAAGCGGAAATTCAATGGAGTCTGCCATGAAATAGACGT
TCCATCAGGTTGGAGTAAGATACCTGTTATTGTCACGAAAAGAGATACAA
GGTGTTTTGGTGGAAATTGGACATCGTTATTGGTAGGAGCTATAAAAGAG
ATCAACCCATATTGCGTTTGGAAATTCACCTATAACTTCGTTAAAAAAGA
TGAATCACGAAAGTGGCGTAAAGGATATTTCACGGGTAAAGCAGAATGTA
AAATGGAAAACTGCAACTGTAAAGTAACGATATCACAAGACACAGAAGAA
TCGCAAAAACTCTGTTTACAATTTGATGGAGATGTCAAACACATTATGAA
TAAACCAAAGAAAAGACAGATACGTGGTAGCACCAGGAGGGAAGAAATAG
AGCAAGTGAAAACAAATCCAAAGGTCTCTGCAGCTGGAATTTATCGAAAA
AAGCTTAGCTCGATTGAAAAGGATGTCTTGCAGTCAGGTAATCGCGATGG
TGCTTCGTCTAAAAAGGTTCATCAAAAAATACGCGCAGAGGCAATGAAGG
AAATAAATTCACCAAATAATCTTTACGGCAACATCCTCAAACTGAAAAAA
TCATTCGAACATGACGATAAAACAGAGGCTACGAGAAACAACCTTAAATT
CCGTCGCTTTTATGGTTTCATCCAAAGATTTGTGGTAGATGAAAAAGAAT
TGAAAATTGTTCTTTTCTCGGAAGAAAATGTTCGAATCTATCATGACCTT
GCTGAAAGAGATATCGTTTGCTTCGATGCTACTGGGGGAATCGTAAAGAA
GATAAGAGGGATGAAAAAAATCTTTCTTTATGCCATGGTAATGAAGAATC
CGTATAACAGTACAGTTGCTCTTCCTGTGGCTTCGTACATCACAAGCAAT
CACAATATAGAATCAATCAGTGTAATGTTGCTGACATTGAGAGAAAAAGA
GAAAGAATTGTTTGGTGATTTGTGTCAGCCTATTACTATTATGATCGACA
ACAGCAAAGTTTTACGTGCAGCAGTTCTCAAGGAACTCAATGGAGAGACT
TTTGTTGAATACTCAAATAAATTGTACCGATTCCTAGTCGAAGGCCAGAA
AATCGATTTCAAAACGCTGGTTTTCAGCTGCAGCAGTCATATACTCAAGC
AAGTAAAATTTCGATGTCATAAGCTATCACTTGGTTCAACAATATCTGTC
TTTATTTTGCATTGTATCGGAAGGATGATCATCACCGTTTCCTTAGATGA
ATTGACCACCATTGTCCAGCTTTTCAACAATGTTCTATCTGCAAAATCGA
TCAATCAACAGCTAGAAGTATCAGTTACAAATATTGAACGTTTAGTAAAC
GAGTTCAAAGATCATGAGTTGTATGAAGATTTCAGAAAAGTCGAAGAGGA
AGATGTCACCACTTACGAAGAAGAGGAACAAACCCAAGATAGCAACTCTG
ACTCTGAATTTGGCAACGGGATAAACGATAACTTGGTGAAGAAAAAGAAA
ACGAAGAAAATGAAGAAGAGTGGGAGGAAAAATGAATGGGTTGGGTATTG
GAATCGTACGCTAACGCTGAGTGAAGCAAAGAGATCAAACCAAAAAAACG
AGTACTACTCGCCGTCATTTCTGAGCTATTTTCGGAAGGAGATGCTTCCA
AAGGTAGTGATCTGGACAAAGATTTGTTTTAAAAATCTTCCGAAGTCTTC
AAATGCAAGTGTGGAGAATTATTTCAAATATGTGAAGTCAGAACACGATA
CCAACTTACCGGTTACTAATTTCATCCAACAATATAGAGAAAGAACCAAA
GAGCTTGCTATTGAGTATGGAGAAGAAATCATCAAAGGTGCTGGGAAGTT
CGGGGTAAGAGAAAACATCAACTTGGTCAAGATTGCTCAAAACGACGTTG
AAGATAACCATGTAAAAGTCGTGACGGAAAAATGGAATCGAAGATCAAAA
AGGAAGCATACCACTGGAAACAAGTTCCTCCATCCTTCAAAAAAGGCTAA
ATTTAATTATGTACAACAGGAAGCTCCGAAAAGGGAAACAAAGAATTCAG
GTAGAGGAGGAAAGCAAACAAAAACACACGAAACTGGAAAAGAAGATGTA
GCTACAGAAAGTCAAAGAAAAGAAGATGCAGAAGAAGATCAAGAAAGTAC
AAACGAAACAGCAGAAGTAGAGGAAGTATGCGAGGAGATTGGAAACGCTC
GTGACGTAATTAACGAAGAAATCAACTCGCAAGATACCACATTGCAAGGG
TGCTGTTCCCGGAATTTAGGGGATGTATTCATGGTGATCTGTTTTGACTG
TGAGAAGCGGTATCATGGACGTTGCCTAAGTTTTGATGCAGAGTTTTTGG
ATTTGGTGAAGATCTTTATTTGTAAATCATGTCAACAAAAGAACACACAT
GGTTTAGCTAATTTTTTTCATTATCAGGCTAGGAAAACGGAGCCAATCGA
AAATTGGAAAGCTCTACTGGATAGTCTTGAAGCTGACACACTTGAAGTGT
TTGATGGCCACAAGTTCGTCCTTGAAGATGATATCATCACCGAAGAAATT
AAAGTAAAAAGCAAAATCGGCATCTTCAACAACCAAAGGAATTGTTGGTT
TTCTGCTGTTGTTCAAGCACTTTGTGGAACGTCTGCCAATTGTGTGTCAT
CGATGGATGGGAATCTGGCACATATTTGCGTACAACTGGAATTGATTCCA
TCCTCAAAGAATCCTGCTATTAATCTGGATAAAGAATATTCTGCACTGTG
TCATACATTGGGTGTTAAAGTTGGCAGAGACCAAAATCAAGATCCATCAG
AACTTCTGTTCAAATGGATTGAACAAATGTCGGAAATAAGCAAATTCCAA
TTGCACCCTATTACTGTTTCTAGGTGTAGATCTTGCAAAACGGTTCTCAA
GGTTGGACAACATGGTGGCGAAGAAAAATGCATGACTCTAACATTTCCCG
AAAATTGTCAACAAATAAAGGTATCAGACCTATTTTGGTACAATCTTGCT
AGCTTCGATTCTCTAGATTATGATGATGTTATGATGAATTGCAATTGCCC
AACCAACACTCTACGTAGTTTCACCGTGTTGCTCAACTCACCAGAATACC
TGATCGTTAAGTTTGATCGTACTCCACATCGGATTAAAGATCAGGTCAAT
ATGGTTCAGTCAAAGGTCGTACTAAACGAAATGATTGACCTATCCCCCTT
TTCTACAAAATTTCAAATTCCTGCAGCATATACTCTTTTTGCAACCATCA
ACTATGGTTACAATCAAAAGAGTGTCATGTCTAACCACTTCACCGCAACC
CTTTTCGACCACGCTGATGGAAAAGCCATTTGGTTTGACGATATTACAAC
CAGGAGATACACAATGAAGAAACGACTTAGTGACGAAAACTTTCAACAAA
CCCTTTACATTGCTCTATTCATTCGTTCATCTTGTGTCGGCGTGAAAATT
CCATACATCAATTATCCTTGGCATTTAAAATCGGCTGAAGTTTCATTAGT
TGAATCCGCCTTGTTCGGTGAACTCACAGAATCGATCATCACTAAAAGGC
AAGATTTGTTAACCTGTTCTGGTGATAACCTCCTCAATTGTGATGTTATT
TCAGCTTTCCTCAGAACCATCCCAAGACAAGACGACCCAAATGTAATAGT
CTGCTCTTCGTTTCTCATCGAATCTGTTATCGATGGAGTCCACTCGAACG
AGTACCAAAAATTTGAACATCGTGATTTCCTTGATTGTAATCTAATTATT
TTCCCCCTCAACAAAACTGGTAATCCTGGTCACTGGTCTATCATTGCTTT
ATACCCAAAGGCAAAGTCGATATTCCATCTCAGCTCAATCAAAGAGAACG
ATTCATCGGTTTTTCATCCAATCATTCATCTACTAAGACGGGCATATTCG
AGAATTGGCAAAGCATTTACAAGTTCCAGCTGGACGTTTTATCAACCTTG
GGAGATTCCGTCTCAGTCAGACGCTCATAGCTGTGGAGTTCTTGCCTGCA
TCAACGCATACAATATCATCAACAACAAATCGTTCGTGGTTTTTGACGAA
GAATTAACTCTGGTTAGGTACTGGATAATCTCGACTTGTTTAAATTCTGT
GATTAGTTTTCCCTCGAAAGATAAACCGGTTTCCAAACCTACAGAACCTG
CACAAACGTATAGTCGCATCGAGCCAATTCACTTTTTGTCTCAAACTTCA
AGCATCAATGTTTTCGATAAAATCTTTGAAACAGTTGCCGACAACCTAAT
TGGTGTTGAATCAGATTTAGATGCTGATGAAGATTCTGTTAACGACCAAG
ACAAATTCAAGGAAGTTGAAAATCCTCAAATCGACAAAAATCTACAAGCC
TTTTTGGATTCCGGTACCTACGTCAGCGAGATGAAAAGAATTTTCCTTAC
CCCTTCTGTCAAAATCCTTTTGATGTTGTCACCTTTTACAAAACGAACTC
AATAAAAACAATTTCAAAACAATGGGAGCAGCTTTCAAATCTATACACCG
TTTCACACGACACAAGAGACGCAATCGGACTTCAGCTTCGAAAAGAAATG
AATTTTTCAACTTTTGGCGTCATGAATCGACACCCAATAGGAGACTTTTA
TTGTGATTTGATTTGTCCTGTTTTCCTGTTACTGTATTACAAAACTGTCC
AACAAACTGATCTGTTTACATCAGAGTGTACCCTTCTACCGGGACATCAA
TGGCACAAAAGAATTCTTCTAGAGGTAATAAGAATTCAATCATTCCATCT
TTTCTCCTTTGACCTTTCATTTACCAAGTACCACGTCACCCCCTACCTAT
TTCCCTTAATGTTAAAACATTAGAATCGACTAACCCAGCTGGCACGCAAC
GTTGTTTTAACGTTAATCTAATGTTCACTACGTTCATATAACGTTGGATG
AATGTTGTAACAACGTTGTGTGCCAGATGGGAAAGTGCGAGTATAACGAG
TGTAAGGATGTTAATTTTTTGACATTTTATTTAACCTTTATATTTCTTTG
TTCCCTACAGGAAGCTCAAAACAAAAACACTACATGCAAAATAAATCAAG
TAACAATCCAAGGTGAGAGTANAGGATTATAATTTTTTGACATTTTATTT
AACCTTTATATTTCTTTGTTCCCTACAGGAAGCTCAAAACAAAAACACTA
CATGCAAAATAAATCAAGTAACAATCCAAGGTGAGAGTACAATTTTATCA
ATATTCCATATACATTGCATTAGGCAGCTATCTGCTTGGTTTAACGAGGT
GGAATATAGAATATATTTTGTTATTGAAAAACATTTCAATGGGTTTTAAG
TTAAGGCCTCGAGAATTTCAAATAACATAAAGATTTTGCTTTAATACCAC
AATCCTTAGATCACGATCCTAAAACGATTACGGAGCACATCAACCTACCT
AAAATGCTGATAGTTATAGTTGGCACATATGGAGTTACTTTGAAATTGCA
CACCTTCATCCAGACAGTTTTCATAGCCTTCAATTATGACCTATGATAAG
TTTGAGTCCTGGAAATCTCAGCAACTTTACTCGTAAACTGAAGAAGAGAG
TTTCCAATGCAAACCACCTCGAAAATCTCCTGAATTTGACTGAAGATTAA
TCTGTTTGTCTCATTTTTTTCAGCTATTAGTAGGTCGCGTATACTCGAAC
AAAGGACACACGCTGTCATCATTCCTAAGGTATATTTAAAGTCTATATCT
ATAATTTAATGATCGAAAACATTCAAAAGATAAATCTCTTCAGATTGTAC
CTTATATAGCTCTGATTAAAAAATGCTACCAACTCTCGCAGGTCTAGACA
GACCCTAGAAAACCTTGGAAACAAAGGCTAATCAGGGAACCGTTCATCCG
AATCAATGATAACTTACAGAAACAAATTTTCAAGTTGAAGTCTAAGCATA
TAAATAACCATGAATTAAGGTTGAAAATGAGATTTTGCTAAGCATATTGA
GTCTCGACCCGATTTTATGTGTGCTTATAAAGAAAGAGTATATTCGGCAA
CCTGAAAAATTGCCTTACTTTCCCATTTTCCAGATTTTCCAGGGTTCGTC
TATACTTAAAACCTTATCTTATAACGTGATCAATGTAAACGCAATAACCT
GGACAAAAGTCTGTCAGAATAGATTGTGAAAACTTTTCCTGGGTCACATT
GTACATATAGGCGTAGGTATGACTGAGGATTTATTTTTGGATCTTTCACA
CTCTCCTGATGTGTGATATACGATGATAATAACCAATCAATTTTTCTTTT
TCAATTAACAGAATGATGGAGATACGATTTCTGATGGTGACCCTTGCGAC
AACATCAATTTTGACATAGATCCAGATAATTTACCATGCAGAGTTTTGAT
ATCCTTGAATAAAGGTGAGTTATTAGAGCTTCTTAATTTTTGATTTTGCA
AAGGTGTTCTGGGTTCTAAGATTATAAATAGAACGAATAGTCGGACCGAT
TTGTTAGTTGTCCGTCCACAGTAAAAAAATCAATGACCCTGCTTCAGGAA
AAAATTTATTCAGTACATTGTGAGAGCTGATTATTTTAAACAAATAGTTC
AGTTCAGCCACTTCGCTAACTTCATCTATAGCGTAGTGTAATTTTTCAAC
AACTTAGTTGAGTAAACTCACTTGACATGATTTAATCTTATTTCAGCTTC
TCTTTTTGATGCATTACCGAGGATCCTTGAAGAATGCGAAAAAAAACAAC
TGGTATCGATTACCATTCCTTTGGCTAACTTTGATGAAAGAATACTGAAA
ATGGTTTTCGACCAAAGCTACGGAACTGACAAATCGACCGAGATCTTTCG
TTTTGCTTCACCAAGGCTGTCGAGGACAGACGCAGAAAAGATCATTAAGT
ATTTCAATAACCAATGAAATTTTTTTTGATGGGTTTAGTCCCAGAAACAA
ATTGTTCTCTAGAACAACAATTAGATATATTAGAAATTTACTTACTGGTC
AACTTCAGATCTCATTATTTACATCATCAACAATTATTTTACCTTAAAAC
TCTTAACGATCTAGACGTG Coding sequence (CDS) from alignment at sc0001818:5085..12453- >TCONS_00038279 ID=TCONS_00038279|Name=TCONS_00038279|organism=Clytia hemisphaerica|type=CDS|length=4803bp|location=Sequence derived from alignment at sc0001818:5085..12453- (Clytia hemisphaerica)
GAAAGCAGAGAAGCCAATGGAGAAAATGAAAGTGAAAAAGAAAATGAAGG
AGATTTTTATGAAAGTGACTCTGAGAACAAAGCAATATCCTATAAGCAAG
CTTATGTCAAAGATGTTTTGTCTGATATGTTTACATCGACAGCAACTAAA
CTAATCAAGTGGGCATGCAGTGACACTACGAGTACACATCCTATATCATT
CAAAAATGAAACAAAGTCAAAATCTAAAAATACATTCAAATCAAAGATTG
AGAAACGTTCTACACCCCACAATGGAAGGAGCTTTTTGAATGAGGCTGGA
TTAACACATGAAACTGGACAGTGCCTGGTAGGGGGGACATTCCCTCGTGA
TGGAATTTTCAAGCGGAAATTCAATGGAGTCTGCCATGAAATAGACGTTC
CATCAGGTTGGAGTAAGATACCTGTTATTGTCACGAAAAGAGATACAAGG
TGTTTTGGTGGAAATTGGACATCGTTATTGGTAGGAGCTATAAAAGAGAT
CAACCCATATTGCGTTTGGAAATTCACCTATAACTTCGTTAAAAAAGATG
AATCACGAAAGTGGCGTAAAGGATATTTCACGGGTAAAGCAGAATGTAAA
ATGGAAAACTGCAACTGTAAAGTAACGATATCACAAGACACAGAAGAATC
GCAAAAACTCTGTTTACAATTTGATGGAGATGTCAAACACATTATGAATA
AACCAAAGAAAAGACAGATACGTGGTAGCACCAGGAGGGAAGAAATAGAG
CAAGTGAAAACAAATCCAAAGGTCTCTGCAGCTGGAATTTATCGAAAAAA
GCTTAGCTCGATTGAAAAGGATGTCTTGCAGTCAGGTAATCGCGATGGTG
CTTCGTCTAAAAAGGTTCATCAAAAAATACGCGCAGAGGCAATGAAGGAA
ATAAATTCACCAAATAATCTTTACGGCAACATCCTCAAACTGAAAAAATC
ATTCGAACATGACGATAAAACAGAGGCTACGAGAAACAACCTTAAATTCC
GTCGCTTTTATGGTTTCATCCAAAGATTTGTGGTAGATGAAAAAGAATTG
AAAATTGTTCTTTTCTCGGAAGAAAATGTTCGAATCTATCATGACCTTGC
TGAAAGAGATATCGTTTGCTTCGATGCTACTGGGGGAATCGTAAAGAAGA
TAAGAGGGATGAAAAAAATCTTTCTTTATGCCATGGTAATGAAGAATCCG
TATAACAGTACAGTTGCTCTTCCTGTGGCTTCGTACATCACAAGCAATCA
CAATATAGAATCAATCAGTGTAATGTTGCTGACATTGAGAGAAAAAGAGA
AAGAATTGTTTGGTGATTTGTGTCAGCCTATTACTATTATGATCGACAAC
AGCAAAGTTTTACGTGCAGCAGTTCTCAAGGAACTCAATGGAGAGACTTT
TGTTGAATACTCAAATAAATTGTACCGATTCCTAGTCGAAGGCCAGAAAA
TCGATTTCAAAACGCTGGTTTTCAGCTGCAGCAGTCATATACTCAAGCAA
GTAAAATTTCGATGTCATAAGCTATCACTTGGTTCAACAATATCTGTCTT
TATTTTGCATTGTATCGGAAGGATGATCATCACCGTTTCCTTAGATGAAT
TGACCACCATTGTCCAGCTTTTCAACAATGTTCTATCTGCAAAATCGATC
AATCAACAGCTAGAAGTATCAGTTACAAATATTGAACGTTTAGTAAACGA
GTTCAAAGATCATGAGTTGTATGAAGATTTCAGAAAAGTCGAAGAGGAAG
ATGTCACCACTTACGAAGAAGAGGAACAAACCCAAGATAGCAACTCTGAC
TCTGAATTTGGCAACGGGATAAACGATAACTTGGTGAAGAAAAAGAAAAC
GAAGAAAATGAAGAAGAGTGGGAGGAAAAATGAATGGGTTGGGTATTGGA
ATCGTACGCTAACGCTGAGTGAAGCAAAGAGATCAAACCAAAAAAACGAG
TACTACTCGCCGTCATTTCTGAGCTATTTTCGGAAGGAGATGCTTCCAAA
GGTAGTGATCTGGACAAAGATTTGTTTTAAAAATCTTCCGAAGTCTTCAA
ATGCAAGTGTGGAGAATTATTTCAAATATGTGAAGTCAGAACACGATACC
AACTTACCGGTTACTAATTTCATCCAACAATATAGAGAAAGAACCAAAGA
GCTTGCTATTGAGTATGGAGAAGAAATCATCAAAGGTGCTGGGAAGTTCG
GGGTAAGAGAAAACATCAACTTGGTCAAGATTGCTCAAAACGACGTTGAA
GATAACCATGTAAAAGTCGTGACGGAAAAATGGAATCGAAGATCAAAAAG
GAAGCATACCACTGGAAACAAGTTCCTCCATCCTTCAAAAAAGGCTAAAT
TTAATTATGTACAACAGGAAGCTCCGAAAAGGGAAACAAAGAATTCAGGT
AGAGGAGGAAAGCAAACAAAAACACACGAAACTGGAAAAGAAGATGTAGC
TACAGAAAGTCAAAGAAAAGAAGATGCAGAAGAAGATCAAGAAAGTACAA
ACGAAACAGCAGAAGTAGAGGAAGTATGCGAGGAGATTGGAAACGCTCGT
GACGTAATTAACGAAGAAATCAACTCGCAAGATACCACATTGCAAGGGTG
CTGTTCCCGGAATTTAGGGGATGTATTCATGGTGATCTGTTTTGACTGTG
AGAAGCGGTATCATGGACGTTGCCTAAGTTTTGATGCAGAGTTTTTGGAT
TTGGTGAAGATCTTTATTTGTAAATCATGTCAACAAAAGAACACACATGG
TTTAGCTAATTTTTTTCATTATCAGGCTAGGAAAACGGAGCCAATCGAAA
ATTGGAAAGCTCTACTGGATAGTCTTGAAGCTGACACACTTGAAGTGTTT
GATGGCCACAAGTTCGTCCTTGAAGATGATATCATCACCGAAGAAATTAA
AGTAAAAAGCAAAATCGGCATCTTCAACAACCAAAGGAATTGTTGGTTTT
CTGCTGTTGTTCAAGCACTTTGTGGAACGTCTGCCAATTGTGTGTCATCG
ATGGATGGGAATCTGGCACATATTTGCGTACAACTGGAATTGATTCCATC
CTCAAAGAATCCTGCTATTAATCTGGATAAAGAATATTCTGCACTGTGTC
ATACATTGGGTGTTAAAGTTGGCAGAGACCAAAATCAAGATCCATCAGAA
CTTCTGTTCAAATGGATTGAACAAATGTCGGAAATAAGCAAATTCCAATT
GCACCCTATTACTGTTTCTAGGTGTAGATCTTGCAAAACGGTTCTCAAGG
TTGGACAACATGGTGGCGAAGAAAAATGCATGACTCTAACATTTCCCGAA
AATTGTCAACAAATAAAGGTATCAGACCTATTTTGGTACAATCTTGCTAG
CTTCGATTCTCTAGATTATGATGATGTTATGATGAATTGCAATTGCCCAA
CCAACACTCTACGTAGTTTCACCGTGTTGCTCAACTCACCAGAATACCTG
ATCGTTAAGTTTGATCGTACTCCACATCGGATTAAAGATCAGGTCAATAT
GGTTCAGTCAAAGGTCGTACTAAACGAAATGATTGACCTATCCCCCTTTT
CTACAAAATTTCAAATTCCTGCAGCATATACTCTTTTTGCAACCATCAAC
TATGGTTACAATCAAAAGAGTGTCATGTCTAACCACTTCACCGCAACCCT
TTTCGACCACGCTGATGGAAAAGCCATTTGGTTTGACGATATTACAACCA
GGAGATACACAATGAAGAAACGACTTAGTGACGAAAACTTTCAACAAACC
CTTTACATTGCTCTATTCATTCGTTCATCTTGTGTCGGCGTGAAAATTCC
ATACATCAATTATCCTTGGCATTTAAAATCGGCTGAAGTTTCATTAGTTG
AATCCGCCTTGTTCGGTGAACTCACAGAATCGATCATCACTAAAAGGCAA
GATTTGTTAACCTGTTCTGGTGATAACCTCCTCAATTGTGATGTTATTTC
AGCTTTCCTCAGAACCATCCCAAGACAAGACGACCCAAATGTAATAGTCT
GCTCTTCGTTTCTCATCGAATCTGTTATCGATGGAGTCCACTCGAACGAG
TACCAAAAATTTGAACATCGTGATTTCCTTGATTGTAATCTAATTATTTT
CCCCCTCAACAAAACTGGTAATCCTGGTCACTGGTCTATCATTGCTTTAT
ACCCAAAGGCAAAGTCGATATTCCATCTCAGCTCAATCAAAGAGAACGAT
TCATCGGTTTTTCATCCAATCATTCATCTACTAAGACGGGCATATTCGAG
AATTGGCAAAGCATTTACAAGTTCCAGCTGGACGTTTTATCAACCTTGGG
AGATTCCGTCTCAGTCAGACGCTCATAGCTGTGGAGTTCTTGCCTGCATC
AACGCATACAATATCATCAACAACAAATCGTTCGTGGTTTTTGACGAAGA
ATTAACTCTGGTTAGGTACTGGATAATCTCGACTTGTTTAAATTCTGTGA
TTAGTTTTCCCTCGAAAGATAAACCGGTTTCCAAACCTACAGAACCTGCA
CAAACGTATAGTCGCATCGAGCCAATTCACTTTTTGTCTCAAACTTCAAG
CATCAATGTTTTCGATAAAATCTTTGAAACAGTTGCCGACAACCTAATTG
GTGTTGAATCAGATTTAGATGCTGATGAAGATTCTGTTAACGACCAAGAC
AAATTCAAGGAAGTTGAAAATCCTCAAATCGACAAAAATCTACAAGCCTT
TTTGGATTCCGGTACCTACGTCAGCGAGATGAAAAGAATTTTCCTTACCC
CTTCTGTCAAAATCCTTTTGATGTTGTCACCTTTTACAAAACGAACTCAA
TAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038279-exon-sc0001818-1575043694:7042..12453 | TCONS_00038279-exon-sc0001818-1575043694:7042..12453 | Clytia hemisphaerica | exon |
| TCONS_00038279-exon-sc0001818-1575043694:6425..6480 | TCONS_00038279-exon-sc0001818-1575043694:6425..6480 | Clytia hemisphaerica | exon |
| TCONS_00038279-exon-sc0001818-1575043694:5740..5842 | TCONS_00038279-exon-sc0001818-1575043694:5740..5842 | Clytia hemisphaerica | exon |
| TCONS_00038279-exon-sc0001818-1575043694:5085..5457 | TCONS_00038279-exon-sc0001818-1575043694:5085..5457 | Clytia hemisphaerica | exon |
| TCONS_00038279-exon-sc0001818-1510915933:7042..12453 | TCONS_00038279-exon-sc0001818-1510915933:7042..12453 | Clytia hemisphaerica | exon |
| TCONS_00038279-exon-sc0001818-1510915933:6425..6480 | TCONS_00038279-exon-sc0001818-1510915933:6425..6480 | Clytia hemisphaerica | exon |
| TCONS_00038279-exon-sc0001818-1510915933:5740..5842 | TCONS_00038279-exon-sc0001818-1510915933:5740..5842 | Clytia hemisphaerica | exon |
| TCONS_00038279-exon-sc0001818-1510915933:5085..5457 | TCONS_00038279-exon-sc0001818-1510915933:5085..5457 | Clytia hemisphaerica | exon |
| TCONS_00038279-exon-sc0001818-1491911889:7042..12453 | TCONS_00038279-exon-sc0001818-1491911889:7042..12453 | Clytia hemisphaerica | exon |
| TCONS_00038279-exon-sc0001818-1491911889:6425..6480 | TCONS_00038279-exon-sc0001818-1491911889:6425..6480 | Clytia hemisphaerica | exon |
| TCONS_00038279-exon-sc0001818-1491911889:5740..5842 | TCONS_00038279-exon-sc0001818-1491911889:5740..5842 | Clytia hemisphaerica | exon |
| TCONS_00038279-exon-sc0001818-1491911889:5085..5457 | TCONS_00038279-exon-sc0001818-1491911889:5085..5457 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001818 | supercontig | sc0001818:5085..12453 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006508 | proteolysis |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008234 | cysteine-type peptidase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006508 |
proteolysis |
| molecular_function |
GO:0008234 |
cysteine-type peptidase activity |
Blast
The following BLAST results are available for this feature:
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