|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038230 ID=TCONS_00038230|Name=TCONS_00038230|organism=Clytia hemisphaerica|type=transcript|length=1038bp
TATGGCATAACAGCCTTTACAACAGTCCTTCTTTCTATGGTTGTTCCAGC
GCATTCAATGTGCTCTGTCATTGGACTCAGAATGGTAGCTATCAAAATTG
CCTTGTGTTTAGGATATTTTACAGCTTCAACTCTATTCGGAGTCAGCGGA
GTTATTTATTCACTGATATCTGTTCTTTGCTTAGCACTAGTATTGACATA
CTTAGCTAGAAGATCAGTTTTCCTTCTCAAATACTGTCATCAATGATTAC
TAAGTACAATATGCATCTTGACTAATTTCGTCTtttctttgtgatttttt
tcatttttatctctAGTTACATTCAATTCACCTAAGTAATGATTAATCAT
AAACATGTCTTtctaacgagcacaaaaccatAATTTGATCCGAGTTAAGT
TTCATCTACTTTTTAATACTAAGTCAAATTTAGGGGGCGTTTTCCACTGG
CAGCGTAAGCTACAGGAGTAACAAAACGTGTAATAAAACGCTGAATAACG
TAAAACTATTCATATAAGTTGTGGATGTAAAGAGATGGTTTCacgtttat
gttttcttttgcaaaaaggaattttttattttccacaGCAACACAGGAGA
AAATCTTTTACATTTCCTGATCCGCTTATCCTTGCTCTTTTGTTTTCTCA
TACATGCCCTTGACCATGTGGATTAGTGGACTAGAAAATGCGtgtaaaat
acaaaagattTAACGATTTTTCTCCTATGTTGCTTTGGGAAATACAATAT
tattctgaaaagaaaaaattaacgtgCAACCATCtcgttcgaaacgatcg
tttttgcgtgCACATCAGATCAATgccaatcaaattattaaccCCCAAGA
TTCTGTAGAATAAATCGATATAAAAAAAaccgaaccggaaagcggttggt
atatcattaagcagacctatactacctgtaTTCCAAGGAAAACTTGATAG
ATCCATAAATACAAAAATGCTTTATTGCCATTAGCCGTGTGTCTAGCCTT
GtaaatacgggcttagttaactaggctaggtTTAGTAG Run BLAST on NCBI transcript from alignment at sc0001804:21318..22355 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038230 ID=TCONS_00038230|Name=TCONS_00038230|organism=Clytia hemisphaerica|type=transcript|length=1038bp|location=Sequence derived from alignment at sc0001804:21318..22355 (Clytia hemisphaerica)
CTACTAAacctagcctagttaactaagcccgtatttaCAAGGCTAGACAC
ACGGCTAATGGCAATAAAGCATTTTTGTATTTATGGATCTATCAAGTTTT
CCTTGGAAtacaggtagtataggtctgcttaatgatataccaaccgcttt
ccggttcggtTTTTTTTATATCGATTTATTCTACAGAATCTTGGGggtta
ataatttgattggcATTGATCTGATGTGcacgcaaaaacgatcgtttcga
acgaGATGGTTGcacgttaattttttcttttcagaataATATTGTATTTC
CCAAAGCAACATAGGAGAAAAATCGTTAaatcttttgtattttacaCGCA
TTTTCTAGTCCACTAATCCACATGGTCAAGGGCATGTATGAGAAAACAAA
AGAGCAAGGATAAGCGGATCAGGAAATGTAAAAGATTTTCTCCTGTGTTG
CtgtggaaaataaaaaattcctttttgcaaaagaaaacataaacgtGAAA
CCATCTCTTTACATCCACAACTTATATGAATAGTTTTACGTTATTCAGCG
TTTTATTACACGTTTTGTTACTCCTGTAGCTTACGCTGCCAGTGGAAAAC
GCCCCCTAAATTTGACTTAGTATTAAAAAGTAGATGAAACTTAACTCGGA
TCAAATTatggttttgtgctcgttagaAAGACATGTTTATGATTAATCAT
TACTTAGGTGAATTGAATGTAACTagagataaaaatgaaaaaaatcacaa
agaaaAGACGAAATTAGTCAAGATGCATATTGTACTTAGTAATCATTGAT
GACAGTATTTGAGAAGGAAAACTGATCTTCTAGCTAAGTATGTCAATACT
AGTGCTAAGCAAAGAACAGATATCAGTGAATAAATAACTCCGCTGACTCC
GAATAGAGTTGAAGCTGTAAAATATCCTAAACACAAGGCAATTTTGATAG
CTACCATTCTGAGTCCAATGACAGAGCACATTGAATGCGCTGGAACAACC
ATAGAAAGAAGGACTGTTGTAAAGGCTGTTATGCCATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038230-exon-sc0001804-1491911889:21318..22355 | TCONS_00038230-exon-sc0001804-1491911889:21318..22355 | Clytia hemisphaerica | exon |
| TCONS_00038230-exon-sc0001804-1510915933:21318..22355 | TCONS_00038230-exon-sc0001804-1510915933:21318..22355 | Clytia hemisphaerica | exon |
| TCONS_00038230-exon-sc0001804-1575043694:21318..22355 | TCONS_00038230-exon-sc0001804-1575043694:21318..22355 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001804 | supercontig | sc0001804:21318..22355 . |
Blast
The following BLAST results are available for this feature:
|
