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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038224 ID=TCONS_00038224|Name=TCONS_00038224|organism=Clytia hemisphaerica|type=transcript|length=240bp
GCTAAGTCTCTCATCAGTATGATTAGTATGGTTTCAGGAAAGAGTGAaca
gagagaagagaaaacTGTTTGTGTAAATCAAGGTAATTGGAATGGAAGAG
ACATTGTTGTTAAATTGATTCGTAAAGAAAACGTAGAGTTGAACGATCAA
TTGAGATGGGAAGTGAAAGAAATGAGAGACATCAAACATCCGAATCTCTG
TCTCTTCATTGGAGCTTGCATCGATACTGACCACGTGGCC Run BLAST on NCBI transcript from alignment at sc0001801:4685..5935- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038224 ID=TCONS_00038224|Name=TCONS_00038224|organism=Clytia hemisphaerica|type=transcript|length=1251bp|location=Sequence derived from alignment at sc0001801:4685..5935- (Clytia hemisphaerica)
GCTAAGTCTCTCATCAGTATGATTAGTATGGTTTCAGGAAAGAGTGAACA
GAGAGAAGAGAAAACTGTTTGTGTAAATCAAGGTGAGGAATAACCATTGT
ACATATATCTTTATACATCCCAGGACCAAGTTACTCAATGCCGGCCAACC
AAAATATTATGATAGGAGTTTTCCTGAAATTTGTACCGGCGGAGAGAGTG
CTAGTTCTTATTTCGTTTGTACACTAGTGATGTAGAGCGCCGTTTGTCGG
TAAGCAAAGTTTCAAACACTACAATGGCTTCTTTGCGGATACCAACTTTC
AAAAAACTTCGATCAAAAATGGCGGATATAGCTTGGTCCAGGGATATATA
AAAGTAAGTGGGAATAACCAGAAATAACGATGCTCCTGGAAGCACGCATT
AAGGGGGGAACATTCGGTTCAAATTTTGGGGTTATCCGACTTTCTGGTGT
TATTTGAGAATATTATATCCGNTCCGAATCTCTGTCTCTTCATTGGAGCT
TGCATCGATACTGACCACGTGGCCATCTTGAATGAAGTTTGTGGTAAAGG
CAGCTTGGAAGATATTTTGTCCAATGATGATATCGATCTTGGATGGGATT
TCAGATACTCAATGTTAAAGGTTGGTTTGTTTATTGTGACACACTCTGAG
AACTTTTTGTTTTGTTCGAAGCTANTATCCACCAAACTGGATAATAAACC
CTGGACTAAAAAACTACATCCGCAATTTGATCTAGCGCTCTCGGTACATT
TACACCTTATCGAGTAGTGCTACCATTAGGGCACCAGTTTCAAAGCTCAG
ATCAAGGATTTTGGTTGATTGGGATTGAGAAACTTCTTCCAGGGTCATTA
TCCAATCCCATTCATTGTATCGTATTCCAAGGTGACATAAAATATCTAAA
TATCGTCATTTTAACGTCCATAACATAACCTCTTATAATTATAACTCTTT
GACAGTAAATTCACGTATACAAAATACTCTGTCGTTACAATGATTCAAGA
AAAATTGAAGCGCCACCCTTGTTTATGGCGATCCGCTAAGGTTGAAACTC
TCGTATTAGAGAAACTTTTAATAATCTCTGCTTCTCCATTTAGGTAATTG
GAATGGAAGAGACATTGTTGTTAAATTGATTCGTAAAGAAAACGTAGAGT
TGAACGATCAATTGAGATGGGAAGTGAAAGAAATGAGAGACATCAAACAT
CCGAATCTCTGTCTCTTCATTGGAGCTTGCATCGATACTGACCACGTGGC
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038224-exon-sc0001801-1575043694:5854..5935 | TCONS_00038224-exon-sc0001801-1575043694:5854..5935 | Clytia hemisphaerica | exon |
| TCONS_00038224-exon-sc0001801-1575043694:4685..4842 | TCONS_00038224-exon-sc0001801-1575043694:4685..4842 | Clytia hemisphaerica | exon |
| TCONS_00038224-exon-sc0001801-1510915933:5854..5935 | TCONS_00038224-exon-sc0001801-1510915933:5854..5935 | Clytia hemisphaerica | exon |
| TCONS_00038224-exon-sc0001801-1510915933:4685..4842 | TCONS_00038224-exon-sc0001801-1510915933:4685..4842 | Clytia hemisphaerica | exon |
| TCONS_00038224-exon-sc0001801-1491911889:5854..5935 | TCONS_00038224-exon-sc0001801-1491911889:5854..5935 | Clytia hemisphaerica | exon |
| TCONS_00038224-exon-sc0001801-1491911889:4685..4842 | TCONS_00038224-exon-sc0001801-1491911889:4685..4842 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001801 | supercontig | sc0001801:4685..5935 - |
Blast
The following BLAST results are available for this feature:
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