TCONS_00038183 (transcript) - C. hemisphaerica

Overview
NameTCONS_00038183
Unique NameTCONS_00038183
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length125

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00038183 ID=TCONS_00038183|Name=TCONS_00038183|organism=Clytia hemisphaerica|type=transcript|length=125bp
NCGTAGGATCTTCCCCACATTGATCAAGATATTGTAGACTTCATCAGCAT
CAGTCAGTGATGCAGGGAGTGAACGACCATTCCCGATGATTGTTGGAGGA
GACAGTTTCAGTGGCAAAATTTTCC
Run BLAST on NCBI

transcript from alignment at sc0001791:42390..42514

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00038183 ID=TCONS_00038183|Name=TCONS_00038183|organism=Clytia hemisphaerica|type=transcript|length=125bp|location=Sequence derived from alignment at sc0001791:42390..42514 (Clytia hemisphaerica)
GGAAAATTTTGCCACTGAAACTGTCTCCTCCAACAATCATCGGGAATGGT
CGTTCACTCCCTGCATCACTGACTGATGCTGATGAAGTCTACAATATCTT
GATCAATGTGGGGAAGATCCTACGN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022816XLOC_022816Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038183-exon-sc0001791-1491911889:42390..42514TCONS_00038183-exon-sc0001791-1491911889:42390..42514Clytia hemisphaericaexon
TCONS_00038183-exon-sc0001791-1510915933:42390..42514TCONS_00038183-exon-sc0001791-1510915933:42390..42514Clytia hemisphaericaexon
TCONS_00038183-exon-sc0001791-1575043694:42390..42514TCONS_00038183-exon-sc0001791-1575043694:42390..42514Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001791supercontigsc0001791:42390..42514 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00038183 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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