TCONS_00038179 (transcript) - C. hemisphaerica

Overview
NameTCONS_00038179
Unique NameTCONS_00038179
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1088

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00038179 ID=TCONS_00038179|Name=TCONS_00038179|organism=Clytia hemisphaerica|type=transcript|length=1088bp
TTAAAAATGAACCTTGACAAAGAAAGCATCCTGGCCAATCTGGCTAATAT
TGAAAATCAAATTGGGCAGGTCAAGCAGCAACTTGggtcGTCTGGAACAT
GTTCAATGTTGAACAACACTGCTTCTTTTACACAAGTATCAAATGTAACA
ATTCCCGAACGTTCCTCCAACACTATGTCTCCTATTCCATTGTATGATCA
GAGTCAAAGGGACAAGGTGCAAGAGCaaatgaaGCACCTATTTCCACAAA
TATCCAATGATCGTAAAAGGAAAAGAAACAACTTAGCTGTTGGTCTGAAT
TCAAATCCATTCGTTAAAGACAGCTTCACCAGGGAGTACACATGCCTCCC
ACTGGTCACTAGTGTCACAACTCCCTCAAGCCAAATGGCAATGACACTAG
AGTACGCAGGTTTAggaaagaagaagatcacattGCCAAGCAACGCTAAT
CATGCTGAAGTGGTAGCAAACATCCATTCAGCATACCCAAGATTAAAAGA
ATGTGGTTTTTTCACTATGCACAAAGCCAAGAGAGGAGGAAATTGTCAAC
CCCTGCAAGACATGAATTTGGACTCGTATGACGTGAACTCGTTACGTAAA
AAGTTTAAATCTAAATCGTTGATTTATTTACGTCCATTACAGAAAAATCT
AGATTTGTCATTGGTTACAAAAGAAGAGATCTGAAAATTCTTGCACTTTA
TCAAGACCACCAGCTGATTTATCGTCTGGCGTATGGTTAACTACATCATC
AACTTCAAGCGTCGGATCTGAACCTTATAGTCAGTAAGTCAATTTATCAT
CTGTTATCTATCTGTCTGTTACCAGTAGTTTTTCTTGGTTATGATAATTA
GTTTTTAGACCCACTAGTTTGTTGTTTTCTCTTTGAGCAAAGatgcaaaa
ttgtttttgacaGAATATAGCCTGTTAGAAGACAAGACACATTTATGAGC
TAGAAGTAATCATATTTCTCGAAATTTTGAGATGAATGTGTGTTGATCAT
TTTATTGCTTTTCTATAATCAAGCTGATCATTGCGTAATAATATGAAAGG
GTCCATCTTTCCTAGAATGTGACTTTATAGGCGAAGTT
Run BLAST on NCBI

protein sequence of TCONS_00038179-protein

>TCONS_00038179-protein ID=TCONS_00038179-protein|Name=TCONS_00038179-protein|organism=Clytia hemisphaerica|type=polypeptide|length=227bp
LKMNLDKESILANLANIENQIGQVKQQLGSSGTCSMLNNTASFTQVSNVT
IPERSSNTMSPIPLYDQSQRDKVQEQMKHLFPQISNDRKRKRNNLAVGLN
SNPFVKDSFTREYTCLPLVTSVTTPSSQMAMTLEYAGLGKKKITLPSNAN
HAEVVANIHSAYPRLKECGFFTMHKAKRGGNCQPLQDMNLDSYDVNSLRK
KFKSKSLIYLRPLQKNLDLSLVTKEEI
Run BLAST on NCBI

transcript from alignment at sc0001790:17248..26227-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00038179 ID=TCONS_00038179|Name=TCONS_00038179|organism=Clytia hemisphaerica|type=transcript|length=8980bp|location=Sequence derived from alignment at sc0001790:17248..26227- (Clytia hemisphaerica)
TTAAAAATGAACCTTGACAAAGAAAGCATCCTGGCCAATCTGGCTAATAT TGAAAATCAAATTGGGCAGGTCAAGCAGCAACTTGGGTAAATTTTTAATT AAATGGATTAAACTTCAAAATTTATTTTTTACAAACGACAACACAGTCAT CTACAGCTTGCAGGGTATTGCAGAAATCGTTGAGATCTCAGGGGCAAATT TTTGCTTCCATTGTTAGACCCTTTCCAGAAAGTTTCTGTTATATTAACAA CACTCAGGGAAATCTCCAGGAAATCTCTCTCTGGGGGAAATATCCAGGCG TAGTCAATCGAAGGACCCTGCCGACGCACCGGACATAACGAACACCGGAC ACACGAAAGTCCAGTGTAAAATGATAATTTTTTTTACCACCGGACAATTT CTACACCGGACTTAAGGAAGTCGGATGTCCGGTGTCGGAGAAGGATATTT TTTCCCACCGGACAATCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCGG ACATGACCAGTCCGGTGCGTCCGGTGTTTCTTAATTTTTTGTTTCATAAA TGTCCGGCGTTCAAAATTCCCTGTATGCAACACCGGACTTATTGTATGCA ACACCGGACTTATTGCGTCCGGTATAGCGAAAGGATACTTTTTGCCACCG GACAAATACACCGGACAGTCCGGTGCGTCGGCAGGGTCCTTCAATCGACG ACGTCGATTATCGATGTACTCGGTAATAATCTATTTTCATCGACGGTAAT CAGTATATAATCAATGTGTAATCGTCCTTTTATCATCGATTAGTTATCGA TTACCGTCGATTATCATCGATTATTACCGATTACCATCGATTGATCATTC CATACTAATCGATGATAATCCAGAATTTTTATCCAGGGAAATGCCGTGGC CACAATGTTTTGCTTTAGTGAGATTGACCATTTTGTTGTTTAGATTTGAG CGGGCGAAATTTCTGTACAAACCAAAATATGGCTTCGTTGGAATACCGGT TGAAACACTTGTGTCAATGGAATGTAACTTTTCGCGTCGATTAATCGTCG ATTCGATTACGTATCGATTATTATCGATTATCATCGATTACCATCGAAAT ACTATCGATTATTTTTCCGCATCGATTTCATCGATTGACTACGCCTGGAA ATATATCCAGATGGTGTCAGTCGAACGACTTCAAACAAAAATCGCAATCG AACCAATCGAACGTAATCGAACGCGATCGAATAATTGCGATTCGATTGTC AAACGTAATCGAATCTCAATCCAATGGCCAATTCCTGGGTAATATTCGAT TGTGTTCGATTGTGTTCGAGTAAGGTTAGATTGGTTCGATTAATAGTTGA CTATGTTTCATTGGTTCGATTGATTTTCAATTACATTCGATTAATATTCA ATTTCGTTCGATTACAATAACGTTCGATGAGTTTGATTGCGATTAAATTA AATTTGATCACTTCATTAGAGCTTTTTAGTGTGGGCGGCCGAGAGCTTAA GTATCGTACGAAAGCAAATAAAATCTAAATCAATCGAGCATAATCGAACA TAATAGAATACAATCGAACGTAATCGAAGCAATCAAACAGCAAATCCTAG GTAATATTTGATTACGATTCGATTGCGTTCGACAATGGAATTGCAATTAT TCGATTGTGTTCGATTGCGTTCAATTGATTCGGCGTTGGATTCGTTCAAT TGACACCGTCTGGATATATAGTTGCAAATTCTGAAATCTTGTGTTGCTAC CAAAAGAGGTATACAAAGATAAGAAAAAGCATGAATTTGAAATGGGAGAA TCTTCGGTCGAAACAATTGTTAAAGATAAATTTTATTTAATAAAATAGAC CAGGGGATGTCAATCAACCGTTCGATCGCCAATCTAACCAATCAAATAAT TAATCGAACCCAATCGATTGATTGCTTTTCGATTAATAAAATTGATCAAA CACTAATCAAATTCTAGTTGAATCCAAAAAACATGTGAAATTCGATTGGT TTGGATTGGCTTTGACCAGTTTGATTAACGTTCAATCAGTTTCGATTAAC GTTCAATCAGCTTCGGTTAACGTTCAATCGACTTCGATTAGCTTGCGATC AGCTTCAATTAACATTCAATCAGCTTTGATTTTTTAATGTTCGATCAAAT TCGATTTTTTGATCAACTTTGATTTATCTTCGATTAACTGTGGATTAACG CACGTACGATCAACTTCGACATTACATAAAAAAAGTTTAAATTTTTGTTG GGGCTAAATTTGGAAGATCTTTTGTAACATCACCCATCACCACGAAATTC CCTTCCTCCAAAAATAGTTCCACAAAGAATGTTTACTTTATCATTCAATA GAATACTATATTCCTCATCAGTTGATTGGTGGCTTGACTTTTTAGCCATC GATTTTAGTCTTTGAGCAGATCCTGAATCCATATACGGGATGATATACAG TCAATCACAAGAGGACCTAAAGTTAAAATCTTTTTAAAAAATGACAAATC CTTGAGGAGATATAACCCGTAAAGTTGACAATATTTTTTCACTTATTTTG GATTATAAGCCTATGTTGAAAACTTGTATTAAAGGGATTCCTGCATAAAA AATGAAAGTTAATCCATGTAGAGCTATCATGAAAAGCATTTGGAAAATTC AAGTCAATGTTGTCTTAACAGTGATTCTATCCTTAGATATTGACATCCAA AGTTCCAAATTCAAGACATCTGTCCTCTGTGGAAGCCATATTGAATTGAA AATTTCAAAGTTTGATTTCAAGCTCTTTGGCATTCTTAATCCTTATTAGG TTAGGATTGAGGACTGGTTTGCTTTGACAAAGTCTTATTTTTTATGCTGG AATCCCTTTAATGTCAATTGATTTAAGTTCTTAAACTGTTGCACAATCTA ATCAAGATGACGTCACAATTTGCAGATTCTCTGCGGGAGTTACTTTATGA ACAATGTAGACAGGCAGCTGATGACATCAAAAAAAGTGAATAAGTGAAAA TTCGAGGGACAAATATTGAGTACTTATTTTGAAATCTTTATAGTTTAGAG AGTNATATTCCTCATCAGTTGATTGGTGGCTTGACTTTTTAGCCATCGAT TTTGAGCAGATCCATATACGGGATGATATACAGTCAATCACAAGAGGACC TAAAGTTAAAATCTTTTAAAAAAATGACAAATCCTTGAGGAGATATAACC CTTAAAGTTGACCATATTTTTTCACTTATTTTGGATTATAAGCCTTGTTG AAAACTTGTATTAAAGGGATTCCTGCATAAAAAATGAAAGTTAATCCATG TAGAGCTATCATGAAAAGCATTTGGAAAATTCAAGTCAATGTTGTCAACA GTGATCCTATCCTTAGATATTGGCATCCAAAGTTCCAAATTCAAGACATC TGTCCTCTGTGGAAGCCATATTGAATTGAAAATTTCAAAGTTTGATTTCA AGCTCTTTGGCATTCTTAATCCTTATTAGGTTAGGATTGAGGACTGGTTT GCTTTGACAAAGTCTTATTTTTTATGCTGGAATCCCTATAATGTCAATTG ATTTAAGTTCTTAAACTGTTGCACAATCTAATCAAGATGACGTCACAATT TGCAGATTCTCTGCGTGAGTTACTTTATGAACAATGAACTTGGGCTGGGT GCATCCCCAGAATTTTTTTTATCGGCTATATCAAATCATATCAGAGGGGA TGCGGGCAGAAGTTCATTGTCCAAGCATGCCTAGCAGAATAGGCCTTTTA AAACGCAACTGGTCGAAAAGATTCGACGTGGCCTGTGATTATCAATTGAC GAGTCCAAGTTGAAAGCCAAATTATACCTTTGTACCTCTTTGCATGCGTA AGAAAAAAACACAAATGATTAATACATCCAAGTAATATGGTTAAATCTCT CCTTTTTAAGTGTGAGAGATACTTTTCTCAAAAGAATTATGAAAGGACCT ACTGGAATTAACAAACCATACATACCCCTTATCCTAATTTGCCTAAGTGC TCCCCAGAATACCAAATACAAGATAATCACATATTCTTCTTTTTCTCACC TCAGTACACCTTCAACTACCCTAACAACGTGAGTTGATTTTGTACACAGT CATGTGATATGTTTAGGAATTTTTAAACTTGATTTTGTTTCTCTTGGATC AGAGAATTAGACAATTTCATCTATTTTTACTGCTACCTTAAGGAAATAAA TTAGTGTGTGAGAGTAAATTAATGCAGAATAAATTAATGTGAATCGACCC TTATTCACATCATTTAATTCAGCATTTCCTAAAATTGTTTCATATGCATT AATAAATTCTGCATTATTTTGCTATCATTTTGTATGAAAGAAATGTTTCA TTTTCACTAATTTATTCCACAAAACATAAATTTATCCGGCCTTATTTGCA TTAATGAATTCTGCATTTTAATTTATTCCTGCATTAATCTATTCCCTTTA TGCACTTTGATCGTATTTTTAAAGAGTATCCATTATCTGGGTGAAATTTC TCTGATAAAAAACAAGTAAATTAATAGCACTTTGTTTGTATCAATTGTAA TTTAATTATCCACTGAATGGAATTTTTCATTTTAGGTCGTCTGGAACATG TTCAATGTTGAACAACACTGCTTCTTTTACACAGTGAGTCTAGAATGAAG AGCTTTTGTCAATGGTGCTTTCCTCAGACTCAATTATTTCAAATTTCAAA AAAAGTCCTGGAACCCCTAAGAAAAAGTATGCCTGTGTGGAAACTCAAAA TTTGCAAAGCAACCCAATCTGATAGTGATTCTAAGAATGCCTGCTTAGGT TTAATTAAAGCTTCCGCAAGTGGAACCATCAAAAAGATAACTATTAGAGT AAATAGCTGTCTTAGTATCTTAAACTAGATTTGAATAAAATTCTTTAAGA ATCACAGGTCATTTTTGATAATTATACATGTATAAATTATCCTCTTCTAG AGTATCAAATGTAACAATTCCCGAACGTTCCTCCAACACTATGTCTCCTA TTCCATTGTAAGTGTTATTATCTCATCTCCATTCCTCTATCGATGTATCT TGAGAAAACACGTCTCACTCTATTAGCGAATGCCATCTAATTTAATTTAT CCTCATATCTTTCTTTAGCATTTCAGGCTGACCTTCCAGCGCAGCTCAGA AGTTAGAACTAACTTTATTAAGTGTACAAAGGGTGGTGGTGTTACTAAAT TCTTGCGGAAAAGTAGTTAGTAGGCCTGGCACCACCCAAAAACAGCAGTT ACTACACTGTGTAGTAGCTGTTTTTAAAGCTTTTTTGTAATTTCTACTGT TTATTTAGGTATGATCAGAGTCAAAGGGACAAGGTGCAAGAGCAAATGAA GTAAGCCCTGATACTTTGGGGACATTCAAAAACTATGTTTGCCAATAGCT GAACCCTTTTGGCCAGTTTGGCAACAAACATACTTTTTGAATTAACCTAA CAATGTTTTATGTGTTTTATAAGCACATGATCATTTTCCCCCTTGCTCTT ACTCAGACACACTCTGACTTACTTTGATCTTTGAGAACGAAATTTTTTAG GAAAAGAATTCTTTTTTCTTCAGAATTTTTTGTTCCATGTTCTTATGATA GCCAGGTAGGTCCATAAAAGATTGCTTGTTAAAAGGTAAATAATTTGATT CTAATTCTAGGCACCTATTTCCACAAATATCCAATGATCGTAAAAGGAAA AGAAACAACTTAGCTGTTGGTCTGAATTCAAATCCATTCGTTAAAGACAG CTTCACCAGGGAGTACACATGCCTCCCACTGGTCACTAGTGTCACAACTC CCTCAAGCCAAATGGCAATGACACTAGAGTACGCAGGTTTAGGAAAGAAG AAGATCACATTGCCAAGCAACGCTAATCATGCTGAAGTGGTAGCAAACAT CCATTCAGCATACCCAAGATTAAAAGAATGTGGTTTTTTCACTATGCACA AAGCCAAGAGAGGAGGAAATTGTCAACCCCTGCAAGACATGAATTTGGAC TCGTATGACGTGAACTCGTTACGTAAAAAGTTTAAATCTAAATCGTTGAT TTATTTACGTCCATTACAGAAAAATCTAGATTTGTCATTGGTTACAAAAG AAGAGGTTTGTATCTAAATGGAATTGGTTAGCTTTAAAATAATCTGTACA TTATTATATGTTATGTGTCATTATGTTGTACATTATTTACTCACTTTTAA AAATCCTGTTTTTTTCGATTCTCCTCTCTTTTTTATCCCCCACCATATTT AAAAAATTTCGATTCCCACCTCTTTTTTGCTTTCCCCTAATTATTTGACG ATATTGCAGTTCCCCATATGGTTACATAAAAATGCCTCAGTTAAAGTTTC TAAAAGTTTGGGAAAGCTTAGAAAAATATTCTTGAAACTGCTTGAAAATG GAGTTTTATTGATTTAGTTCTAGTATAGTTTGCTGATTTTATTGTTTAAA CAAGTCTTCTGCGAGACTACATTGAGAACAAAGTTCCAAATTTTAATGTT CCCTCTTTATTTTCTTCCATCAAATTTCAAATTTTTCGATAAGCAAACTT TTTTTGTTATCAAAAGTAATAAGAAAGGAGGGTTACTACAAGACAGATTC AGTTACTACTATCTGTAGTAACTGCTTTACAGTAAAAAATTTGCACATAC CACCCTCTGAGACTGTTTTACCAAAAATTGGTTCAACTTACTATGTTTCA TTGAATCTTGTTAAAAAATACTAGACAGGCAGCTGACGACATCTAAAATC TGGACGACTTTGGGACAAACGTCGAGTTGATTTTTCTTGTTCCCATATAT CTACTGATCCTAAAAATTTTACTNGTGTACATTATTTACTCACTTGTAAA AATCCTATTTTTTTCGATTCTCCTCTCTTTTTTATCCCCCACCATATTTA AAAAATTTCGATTCCCACCTCTTTTTTGCTTTCCCCTAATTATTTGACGA TATTGCAGTTCCCCATATGGTTACATAAAAATGCCTCAGTTAAAGTTTCT AAAAGTTTGGGAAAGCTTAGAAAAATATTCTTGAAACTGCTTGAAAATGG AGTTTTATTGATTTAGTTCTAGTATAGTTTGCTGATTTTATTGTTTAAAC AAGTCTTCTGCGAGACTACATTGAAAACAAAGTTCTAAATTTTAATGTCC CCTCTTTATTTTCTTCCATCAAATTTCAAATTTTTCGATAAGCAAACTTT TTTTGTTATCAAAAGTAATAAGAAAGGAGGGTTACTACAAGACAGATTCA GTTACTACTATCTGTAGTAACTGCTTTTCAGTAAAAAAATTGCACATACC ACCCTCTGAGACTGTTTTACCAAAAATTGGTTCAACTTACTATGTTTCAT TGAATCTTGTTAAAAAATACAGATTGATTGAGTGGACAAAGGGTATAAAA TGATATTTTAAAACTTTGCCTGAAAGTTGAAGAAGTTCCAAAAATATTTC AATAATTATTAAAAATAAATAAATTTTTACAGGTTTCCCCCTAATTAGCA TATTTTTAGCATTTAATACACTATATTTGGAGCTACTACACAAAATTTAT CGGACATCACCCTTGTTTGTATTCATAACAAATCTGTAGGTAACTGCTTT AGCTACTTCTAGTATGTAGTAGCTACTTTTCATAAAATGGAAAACTAAAC CACCACTGTGTAGTGTGTTCGTGTCACCCAGTGAGCATGACCACCCCTTG AGGAAGAGTCTTGTTTTTCAAATGTTTTTTTTTCTCATTCAACAGGCTAA CAAGGAAAATGACAACGTGCGCGGGTCAAACACCATCTCATGCTTTAAAT GTAACAAGCTGATCCCCTTAAGACGATTCCTTGAGCATCAAAAGTCCTGC AAGTAAGAAAGTCATTGAATCTATTAGAATACAGATCATCCTTAAACGAT GTGCTCACTAAAGACTGGTGCATAAAATTTCGATAAAGTTTTTGTTTTTA GCCTGTTTTGGCTAGCCAGAGTGTCAGGCGCAATAACTTCCGTTCAACGA GTTTCTCTACTCTTATCTAAACGCCTGATTTCAAACAACTCTCGTTGCGA CTCGTTTGATCGCATCCAATCAGATTTCAGTATTTTTTCTCACAATCAAA ACGACAATCTGTTGTCTCTGATTGTTTTGAAAAAATTTACACGTTGTAAA CAAAGAGAAAAAGTTTGTCATTTTTAATTGCTTATGGGAATAACGTAGAT TTATCATTTTTGCCTTTGATAACATATTTTTTTTTCTATTGCCTTGGGAA TACGAAAAGTCTTCGGCAAAAGCAATCATAATTTTACCGAGTTTGTTTGC AACTAAGCTAATAGAAGACATCATATTTTCTACTATTAGCTTAAAACCTT GGCTATGGTTTGGCAGGTATGATCAAGATACTACAATTTTTGGAACAACT TCTTTCATAAAAAGAGGCCTTTCTTTTGCAAATTTTGTGACTGAAGAAAA TTTACTTCCTTCGTTTTTAGATCTGAAAATTCTTGCACTTTATCAAGACC ACCAGCTGATTTATCGTCTGGCGTATGGTTAACTACATCATCAACTTCAA GCGTCGGATCTGAACCTTATAGTCAGTAAGTCAATTTATCATCTGTTATC TATCTGTCTGTTACCAGTAGTTTTTCTTGGTTATGATAATTAGTTTTTAG ACCCACTAGTTTGTTGTTTTCTCTTTGAGCAAAGATGCAAAATTGTTTTT GACAGAATATAGCCTGTTAGAAGACAAGACACATTTATGAGCTAGAAGTA ATCATATTTCTCGAAATTTTGAGATGAATGTGTGTTGATCATTTTATTGC TTTTCTATAATCAAGCTGATCATTGCGTAATAATATGAAAGGGTCCATCT TTCCTAGAATGTGACTTTATAGGCGAAGTT

Coding sequence (CDS) from alignment at sc0001790:17248..26227-

>TCONS_00038179 ID=TCONS_00038179|Name=TCONS_00038179|organism=Clytia hemisphaerica|type=CDS|length=4104bp|location=Sequence derived from alignment at sc0001790:17248..26227- (Clytia hemisphaerica)
ATCTGAGCACCTATTTCCACAAATATCCAATGATCGTAAAAGGAAAAGAA
ACAACTTAGCTGTTGGTCTGAATTCAAATCCATTCGTTAAAGACAGCTTC
ACCAGGGAGTACACATGCCTCCCACTGGTCACTAGTGTCACAACTCCCTC
AAGCCAAATGGCAATGACACTAGAGTACGCAGGTTTAGGAAAGAAGAAGA
TCACATTGCCAAGCAACGCTAATCATGCTGAAGTGGTAGCAAACATCCAT
TCAGCATACCCAAGATTAAAAGAATGTGGTTTTTTCACTATGCACAAAGC
CAAGAGAGGAGGAAATTGTCAACCCCTGCAAGACATGAATTTGGACTCGT
ATGACGTGAACTCGTTACGTAAAAAGTTTAAATCTAAATCGTTGATTTAT
TTACGTCCATTACAGAAAAATCTAGATTTGTCATTGGTTACAAAAGAAGA
GGTATGATCAGAGTCAAAGGGACAAGGTGCAAGAGCAAATGAAAGTATCA
AATGTAACAATTCCCGAACGTTCCTCCAACACTATGTCTCCTATTCCATT
GTCGTCTGGAACATGTTCAATGTTGAACAACACTGCTTCTTTTACACATT
AAAAATGAACCTTGACAAAGAAAGCATCCTGGCCAATCTGGCTAATATTG
AAAATCAAATTGGGCAGGTCAAGCAGCAACTTGGATCTGAGCACCTATTT
CCACAAATATCCAATGATCGTAAAAGGAAAAGAAACAACTTAGCTGTTGG
TCTGAATTCAAATCCATTCGTTAAAGACAGCTTCACCAGGGAGTACACAT
GCCTCCCACTGGTCACTAGTGTCACAACTCCCTCAAGCCAAATGGCAATG
ACACTAGAGTACGCAGGTTTAGGAAAGAAGAAGATCACATTGCCAAGCAA
CGCTAATCATGCTGAAGTGGTAGCAAACATCCATTCAGCATACCCAAGAT
TAAAAGAATGTGGTTTTTTCACTATGCACAAAGCCAAGAGAGGAGGAAAT
TGTCAACCCCTGCAAGACATGAATTTGGACTCGTATGACGTGAACTCGTT
ACGTAAAAAGTTTAAATCTAAATCGTTGATTTATTTACGTCCATTACAGA
AAAATCTAGATTTGTCATTGGTTACAAAAGAAGAGGTATGATCAGAGTCA
AAGGGACAAGGTGCAAGAGCAAATGAAAGTATCAAATGTAACAATTCCCG
AACGTTCCTCCAACACTATGTCTCCTATTCCATTGTCGTCTGGAACATGT
TCAATGTTGAACAACACTGCTTCTTTTACACATTAAAAATGAACCTTGAC
AAAGAAAGCATCCTGGCCAATCTGGCTAATATTGAAAATCAAATTGGGCA
GGTCAAGCAGCAACTTGGATCTGAGCACCTATTTCCACAAATATCCAATG
ATCGTAAAAGGAAAAGAAACAACTTAGCTGTTGGTCTGAATTCAAATCCA
TTCGTTAAAGACAGCTTCACCAGGGAGTACACATGCCTCCCACTGGTCAC
TAGTGTCACAACTCCCTCAAGCCAAATGGCAATGACACTAGAGTACGCAG
GTTTAGGAAAGAAGAAGATCACATTGCCAAGCAACGCTAATCATGCTGAA
GTGGTAGCAAACATCCATTCAGCATACCCAAGATTAAAAGAATGTGGTTT
TTTCACTATGCACAAAGCCAAGAGAGGAGGAAATTGTCAACCCCTGCAAG
ACATGAATTTGGACTCGTATGACGTGAACTCGTTACGTAAAAAGTTTAAA
TCTAAATCGTTGATTTATTTACGTCCATTACAGAAAAATCTAGATTTGTC
ATTGGTTACAAAAGAAGAGGTATGATCAGAGTCAAAGGGACAAGGTGCAA
GAGCAAATGAAAGTATCAAATGTAACAATTCCCGAACGTTCCTCCAACAC
TATGTCTCCTATTCCATTGTCGTCTGGAACATGTTCAATGTTGAACAACA
CTGCTTCTTTTACACATTAAAAATGAACCTTGACAAAGAAAGCATCCTGG
CCAATCTGGCTAATATTGAAAATCAAATTGGGCAGGTCAAGCAGCAACTT
GGATCTGAGCACCTATTTCCACAAATATCCAATGATCGTAAAAGGAAAAG
AAACAACTTAGCTGTTGGTCTGAATTCAAATCCATTCGTTAAAGACAGCT
TCACCAGGGAGTACACATGCCTCCCACTGGTCACTAGTGTCACAACTCCC
TCAAGCCAAATGGCAATGACACTAGAGTACGCAGGTTTAGGAAAGAAGAA
GATCACATTGCCAAGCAACGCTAATCATGCTGAAGTGGTAGCAAACATCC
ATTCAGCATACCCAAGATTAAAAGAATGTGGTTTTTTCACTATGCACAAA
GCCAAGAGAGGAGGAAATTGTCAACCCCTGCAAGACATGAATTTGGACTC
GTATGACGTGAACTCGTTACGTAAAAAGTTTAAATCTAAATCGTTGATTT
ATTTACGTCCATTACAGAAAAATCTAGATTTGTCATTGGTTACAAAAGAA
GAGGTATGATCAGAGTCAAAGGGACAAGGTGCAAGAGCAAATGAAAGTAT
CAAATGTAACAATTCCCGAACGTTCCTCCAACACTATGTCTCCTATTCCA
TTGTCGTCTGGAACATGTTCAATGTTGAACAACACTGCTTCTTTTACACA
TTAAAAATGAACCTTGACAAAGAAAGCATCCTGGCCAATCTGGCTAATAT
TGAAAATCAAATTGGGCAGGTCAAGCAGCAACTTGGATCTGAGCACCTAT
TTCCACAAATATCCAATGATCGTAAAAGGAAAAGAAACAACTTAGCTGTT
GGTCTGAATTCAAATCCATTCGTTAAAGACAGCTTCACCAGGGAGTACAC
ATGCCTCCCACTGGTCACTAGTGTCACAACTCCCTCAAGCCAAATGGCAA
TGACACTAGAGTACGCAGGTTTAGGAAAGAAGAAGATCACATTGCCAAGC
AACGCTAATCATGCTGAAGTGGTAGCAAACATCCATTCAGCATACCCAAG
ATTAAAAGAATGTGGTTTTTTCACTATGCACAAAGCCAAGAGAGGAGGAA
ATTGTCAACCCCTGCAAGACATGAATTTGGACTCGTATGACGTGAACTCG
TTACGTAAAAAGTTTAAATCTAAATCGTTGATTTATTTACGTCCATTACA
GAAAAATCTAGATTTGTCATTGGTTACAAAAGAAGAGGTATGATCAGAGT
CAAAGGGACAAGGTGCAAGAGCAAATGAAAGTATCAAATGTAACAATTCC
CGAACGTTCCTCCAACACTATGTCTCCTATTCCATTGTCGTCTGGAACAT
GTTCAATGTTGAACAACACTGCTTCTTTTACACATTAAAAATGAACCTTG
ACAAAGAAAGCATCCTGGCCAATCTGGCTAATATTGAAAATCAAATTGGG
CAGGTCAAGCAGCAACTTGGATCTGAGCACCTATTTCCACAAATATCCAA
TGATCGTAAAAGGAAAAGAAACAACTTAGCTGTTGGTCTGAATTCAAATC
CATTCGTTAAAGACAGCTTCACCAGGGAGTACACATGCCTCCCACTGGTC
ACTAGTGTCACAACTCCCTCAAGCCAAATGGCAATGACACTAGAGTACGC
AGGTTTAGGAAAGAAGAAGATCACATTGCCAAGCAACGCTAATCATGCTG
AAGTGGTAGCAAACATCCATTCAGCATACCCAAGATTAAAAGAATGTGGT
TTTTTCACTATGCACAAAGCCAAGAGAGGAGGAAATTGTCAACCCCTGCA
AGACATGAATTTGGACTCGTATGACGTGAACTCGTTACGTAAAAAGTTTA
AATCTAAATCGTTGATTTATTTACGTCCATTACAGAAAAATCTAGATTTG
TCATTGGTTACAAAAGAAGAGGTATGATCAGAGTCAAAGGGACAAGGTGC
AAGAGCAAATGAAAGTATCAAATGTAACAATTCCCGAACGTTCCTCCAAC
ACTATGTCTCCTATTCCATTGTCGTCTGGAACATGTTCAATGTTGAACAA
CACTGCTTCTTTTACACATTAAAAATGAACCTTGACAAAGAAAGCATCCT
GGCCAATCTGGCTAATATTGAAAATCAAATTGGGCAGGTCAAGCAGCAAC
TTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022813XLOC_022813Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038179-proteinTCONS_00038179-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038179-exon-sc0001790-1575043694:26142..26227TCONS_00038179-exon-sc0001790-1575043694:26142..26227Clytia hemisphaericaexon
TCONS_00038179-exon-sc0001790-1575043694:21495..21542TCONS_00038179-exon-sc0001790-1575043694:21495..21542Clytia hemisphaericaexon
TCONS_00038179-exon-sc0001790-1575043694:21121..21177TCONS_00038179-exon-sc0001790-1575043694:21121..21177Clytia hemisphaericaexon
TCONS_00038179-exon-sc0001790-1575043694:20778..20819TCONS_00038179-exon-sc0001790-1575043694:20778..20819Clytia hemisphaericaexon
TCONS_00038179-exon-sc0001790-1575043694:20023..20467TCONS_00038179-exon-sc0001790-1575043694:20023..20467Clytia hemisphaericaexon
TCONS_00038179-exon-sc0001790-1575043694:17248..17657TCONS_00038179-exon-sc0001790-1575043694:17248..17657Clytia hemisphaericaexon
TCONS_00038179-exon-sc0001790-1510915933:26142..26227TCONS_00038179-exon-sc0001790-1510915933:26142..26227Clytia hemisphaericaexon
TCONS_00038179-exon-sc0001790-1510915933:21495..21542TCONS_00038179-exon-sc0001790-1510915933:21495..21542Clytia hemisphaericaexon
TCONS_00038179-exon-sc0001790-1510915933:21121..21177TCONS_00038179-exon-sc0001790-1510915933:21121..21177Clytia hemisphaericaexon
TCONS_00038179-exon-sc0001790-1510915933:20778..20819TCONS_00038179-exon-sc0001790-1510915933:20778..20819Clytia hemisphaericaexon
TCONS_00038179-exon-sc0001790-1510915933:20023..20467TCONS_00038179-exon-sc0001790-1510915933:20023..20467Clytia hemisphaericaexon
TCONS_00038179-exon-sc0001790-1510915933:17248..17657TCONS_00038179-exon-sc0001790-1510915933:17248..17657Clytia hemisphaericaexon
TCONS_00038179-exon-sc0001790-1491911889:26142..26227TCONS_00038179-exon-sc0001790-1491911889:26142..26227Clytia hemisphaericaexon
TCONS_00038179-exon-sc0001790-1491911889:21495..21542TCONS_00038179-exon-sc0001790-1491911889:21495..21542Clytia hemisphaericaexon
TCONS_00038179-exon-sc0001790-1491911889:21121..21177TCONS_00038179-exon-sc0001790-1491911889:21121..21177Clytia hemisphaericaexon
TCONS_00038179-exon-sc0001790-1491911889:20778..20819TCONS_00038179-exon-sc0001790-1491911889:20778..20819Clytia hemisphaericaexon
TCONS_00038179-exon-sc0001790-1491911889:20023..20467TCONS_00038179-exon-sc0001790-1491911889:20023..20467Clytia hemisphaericaexon
TCONS_00038179-exon-sc0001790-1491911889:17248..17657TCONS_00038179-exon-sc0001790-1491911889:17248..17657Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001790supercontigsc0001790:17248..26227 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.0393588 0 0 2.01589 1.16694 1.92186 2.05893 2.33797 2.42103 1.68984 1.86821 2.34733 1.30779 0 0 0.0302992 0 0 0 0.0780475 0 0.0462777 0 0.641981 2.04431 0 0 0.0447981 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00038179 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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