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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038153 ID=TCONS_00038153|Name=TCONS_00038153|organism=Clytia hemisphaerica|type=transcript|length=1222bp
ATTAGTTGAAAAGTTTTTCTAGTCTTTTACTCGAGCCACCATAACATAAT
TTCTCTCCTTGATTTTGGAGTTATGAAGAGTAGAGTATATTTACAATTTA
TATGAAATGATAATTTAAtcaatacaaaaatattttactacaATCAACAC
TTCCTTATTCGAACCCCTATCATTCGAACTActgtcaactctctctaatt
cgaacctttatAATTCGAGtctctttgtaattcgaactagaatattggtc
ccctcaccAGAAAGTGGGTTGAgttactttctataattcgaatctctcta
taATTCTTAGTCCCTTGaagctcgaattagagagagacaactgtcccagc
tggcacacaacgttgttttaacgtttatataacgttatatggacgctgtg
aacattagatgaacgttgaaacaacgttttgtgccagctggggtaaAACC
GAGTAGTTCAGGAAATAACGGAAATTACTTTAAACACTTCTGTTATATTA
CTCTAATTTAATAACTTCCTTCAAAACCGCAGTAAAGGCCagtaaaagat
ttcaaaatacgACTATCTAGTTAGCAGACCAATATTTAGGtcgaattaca
aaaagattcgaataacagaaCTTCGAATTGGTGGAGAGTGTTGactttat
atataaaaaaaattctgctttTTCAAGCATTCGtcagtttgtttgaaaaa
ttgacaaaaccTCTCGTTTCGTTTTTAAGCTTTGgtcccagctagcacac
aacaTCGCTTGAAAGTCCATCTAACGTTTTATGAACCAACGTTAGGTTAG
GAATGTCAGATGAACGTTATAATGACGTTCTGTGTCAGCTGAGATATTGC
TCTAACAACTCTTTTGAAGTAAAAACCAGTTTTGTATAAAAGTCATGTAC
ATCGGTACGGAGTCTCAAAAACTGGAATGTTATCTCATTAACTCGATCAA
ATTGGCATGTATATCAGATAGCAAATCATTTTCCAATCCAGAATCCATTT
GCTTCAAGTTACCTCTAATTTAGACGGCTGTGTATTCTAATTTTTAGATT
ATGCTAACATTTGGCACTAAATTAACATTCGAAAagttttgcttggaaaa
aatttaaagaagtCATTAAATTGATGTCAAAAAAGGGCAACACATTGACT
TAGACAGCTTATTTTTCGCacattttaattcacaagcgagtttatgtttt
tgcacttttgaggacggcggag Run BLAST on NCBI transcript from alignment at sc0001785:33550..34771 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038153 ID=TCONS_00038153|Name=TCONS_00038153|organism=Clytia hemisphaerica|type=transcript|length=1222bp|location=Sequence derived from alignment at sc0001785:33550..34771 (Clytia hemisphaerica)
ctccgccgtcctcaaaagtgcaaaaacataaactcgcttgtgaattaaaa
tgtGCGAAAAATAAGCTGTCTAAGTCAATGTGTTGCCCTTTTTTGACATC
AATTTAATGacttctttaaattttttccaagcaaaactTTTCGAATGTTA
ATTTAGTGCCAAATGTTAGCATAATCTAAAAATTAGAATACACAGCCGTC
TAAATTAGAGGTAACTTGAAGCAAATGGATTCTGGATTGGAAAATGATTT
GCTATCTGATATACATGCCAATTTGATCGAGTTAATGAGATAACATTCCA
GTTTTTGAGACTCCGTACCGATGTACATGACTTTTATACAAAACTGGTTT
TTACTTCAAAAGAGTTGTTAGAGCAATATCTCAGCTGACACAGAACGTCA
TTATAACGTTCATCTGACATTCCTAACCTAACGTTGGTTCATAAAACGTT
AGATGGACTTTCAAGCGAtgttgtgtgctagctgggacCAAAGCTTAAAA
ACGAAACGAGAggttttgtcaatttttcaaacaaactgaCGAATGCTTGA
AaaagcagaattttttttatatataaagtCAACACTCTCCACCAATTCGA
AGttctgttattcgaatctttttgtaattcgaCCTAAATATTGGTCTGCT
AACTAGATAGTcgtattttgaaatcttttactGGCCTTTACTGCGGTTTT
GAAGGAAGTTATTAAATTAGAGTAATATAACAGAAGTGTTTAAAGTAATT
TCCGTTATTTCCTGAACTACTCGGTTttaccccagctggcacaaaacgtt
gtttcaacgttcatctaatgttcacagcgtccatataacgttatataaac
gttaaaacaacgttgtgtgccagctgggacagttgtctctctctaattcg
agcttCAAGGGACTAAGAATtatagagagattcgaattatagaaagtaac
TCAACCCACTTTCTggtgaggggaccaatattctagttcgaattacaaag
agaCTCGAATTataaaggttcgaattagagagagttgacagTAGTTCGAA
TGATAGGGGTTCGAATAAGGAAGTGTTGATtgtagtaaaatatttttgta
ttgaTTAAATTATCATTTCATATAAATTGTAAATATACTCTACTCTTCAT
AACTCCAAAATCAAGGAGAGAAATTATGTTATGGTGGCTCGAGTAAAAGA
CTAGAAAAACTTTTCAACTAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038153-exon-sc0001785-1491911889:33550..34771 | TCONS_00038153-exon-sc0001785-1491911889:33550..34771 | Clytia hemisphaerica | exon |
| TCONS_00038153-exon-sc0001785-1510915933:33550..34771 | TCONS_00038153-exon-sc0001785-1510915933:33550..34771 | Clytia hemisphaerica | exon |
| TCONS_00038153-exon-sc0001785-1575043694:33550..34771 | TCONS_00038153-exon-sc0001785-1575043694:33550..34771 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001785 | supercontig | sc0001785:33550..34771 . |
Blast
The following BLAST results are available for this feature:
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