|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038148 ID=TCONS_00038148|Name=TCONS_00038148|organism=Clytia hemisphaerica|type=transcript|length=1352bp
ccactcgttaccacctcgttaccacatcgttaccactcgttaccacatcg
ttaccactcgttaccactcgttaccactcgttacctcttttagtaacaac
gtcTTCAccaacaaaaatgtttttgagttttctagTTTTCTAATCTTCAT
GTATCCAAGGAATTTTACTTCCCACAGttcaaattttcgttcgtcTCCGT
CAAACGTAATGTTTTTCCAGTGGGTGTGTTGGCACTGGGCCCATAACCTG
TTGAATTCATAGTCGATGGAGGTGGATTTAGACAGAAACTTGAGACATTA
GCATCTATGCTAGAAATTGtgcttttttattagaactaGAATGTTCCGTG
CAGctaatctgccattatggaataaAATACGGAACCAaagcaaaatagat
aaaataaacaaagtagATACTGAGTATCCTTGTAAATATTAACATTCCGT
GCCTACAAGCAATCGAATAAAAACTCAGTTGGAACCTCTCTGGTGTATTA
AATCACAGCCTCTGTACTACCCTGTCACTACTGGTAcagaaaaattaaga
ttaggaCCTGCACTACCCATTTACATCTGGTACAAGCACCAAAAATATTG
GACCATGCACTACCCAGCCACCACTGGTGCATGCCAGGCactaaataaga
aaaaacctgTACTACCCAGTCACTACTGGTACAGGAAAAACAGAATTGAA
CCCTATACTACCCAGCTACAGCTGGTACAGGCACTAGTGATATTGAGCCA
TGTACTACCCAGCCACCACTGGTGCATGCCAGGCactaaataagaaaaaa
cctgTACTACCCAGTCACTACTGGTACAGGAAAAACAGAATTGAACCCTA
TACTACCCAGCTACAGCTGGTACAGGCACTAGTGATATTGAGCCATGTAC
TACCCAGCCACTACTGGTACAGGAAAAACAGAATTGAACCCTATACTACC
CAGCTACAGCTGGTACAGGCACTAGTGATATTGAGCCATGTACTACCCAG
GCATCACTGGTGCATGACAGATATTAGGTGAAAAAACCTGTACTACCCAG
TCACTACTGGTACAGGAAAAGTAAACCCCTGTACTACCCAGCCACTACTG
GTACAGGGGAACTTATACTAAATTCTGTACCGCACACCGGCTACCACTGG
TACGGAGACACCTCAATAAATTCAATTAGCATCTCTATACTATCCATCCA
AACATAAATAGACACGTTTAGGGTAGTAAgagaaaatttagattttgata
tttttcataaaGTAACTTATGCCCTCTCCATATATGAAAAATCTAGATAC
AATgcaattgaattgaaatttgtAAATCCTCTAAACAATGAACTACAATT
TG Run BLAST on NCBI transcript from alignment at sc0001784:7724..9075 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038148 ID=TCONS_00038148|Name=TCONS_00038148|organism=Clytia hemisphaerica|type=transcript|length=1352bp|location=Sequence derived from alignment at sc0001784:7724..9075 (Clytia hemisphaerica)
CAAATTGTAGTTCATTGTTTAGAGGATTTacaaatttcaattcaattgcA
TTGTATCTAGATTTTTCATATATGGAGAGGGCATAAGTTACtttatgaaa
aatatcaaaatctaaattttctcTTACTACCCTAAACGTGTCTATTTATG
TTTGGATGGATAGTATAGAGATGCTAATTGAATTTATTGAGGTGTCTCCG
TACCAGTGGTAGCCGGTGTGCGGTACAGAATTTAGTATAAGTTCCCCTGT
ACCAGTAGTGGCTGGGTAGTACAGGGGTTTACTTTTCCTGTACCAGTAGT
GACTGGGTAGTACAGGTTTTTTCACCTAATATCTGTCATGCACCAGTGAT
GCCTGGGTAGTACATGGCTCAATATCACTAGTGCCTGTACCAGCTGTAGC
TGGGTAGTATAGGGTTCAATTCTGTTTTTCCTGTACCAGTAGTGGCTGGG
TAGTACATGGCTCAATATCACTAGTGCCTGTACCAGCTGTAGCTGGGTAG
TATAGGGTTCAATTCTGTTTTTCCTGTACCAGTAGTGACTGGGTAGTAca
ggttttttcttatttagtGCCTGGCATGCACCAGTGGTGGCTGGGTAGTA
CATGGCTCAATATCACTAGTGCCTGTACCAGCTGTAGCTGGGTAGTATAG
GGTTCAATTCTGTTTTTCCTGTACCAGTAGTGACTGGGTAGTAcaggttt
tttcttatttagtGCCTGGCATGCACCAGTGGTGGCTGGGTAGTGCATGG
TCCAATATTTTTGGTGCTTGTACCAGATGTAAATGGGTAGTGCAGGtcct
aatcttaatttttctgTACCAGTAGTGACAGGGTAGTACAGAGGCTGTGA
TTTAATACACCAGAGAGGTTCCAACTGAGTTTTTATTCGATTGCTTGTAG
GCACGGAATGTTAATATTTACAAGGATACTCAGTATctactttgtttatt
ttatctattttgcttTGGTTCCGTATTttattccataatggcagattagC
TGCACGGAACATTCtagttctaataaaaaagcaCAATTTCTAGCATAGAT
GCTAATGTCTCAAGTTTCTGTCTAAATCCACCTCCATCGACTATGAATTC
AACAGGTTATGGGCCCAGTGCCAACACACCCACTGGAAAAACATTACGTT
TGACGGAgacgaacgaaaatttgaaCTGTGGGAAGTAAAATTCCTTGGAT
ACATGAAGATTAGAAAActagaaaactcaaaaacatttttgttggTGAAg
acgttgttactaaaagaggtaacgagtggtaacgagtggtaacgagtggt
aacgatgtggtaacgagtggtaacgatgtggtaacgaggtggtaacgagt
gg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038148-exon-sc0001784-1491911889:7724..9075 | TCONS_00038148-exon-sc0001784-1491911889:7724..9075 | Clytia hemisphaerica | exon |
| TCONS_00038148-exon-sc0001784-1510915933:7724..9075 | TCONS_00038148-exon-sc0001784-1510915933:7724..9075 | Clytia hemisphaerica | exon |
| TCONS_00038148-exon-sc0001784-1575043694:7724..9075 | TCONS_00038148-exon-sc0001784-1575043694:7724..9075 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001784 | supercontig | sc0001784:7724..9075 . |
Blast
The following BLAST results are available for this feature:
|
