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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038142 ID=TCONS_00038142|Name=TCONS_00038142|organism=Clytia hemisphaerica|type=transcript|length=243bp
TTCAGGTGAATCCATTCCATTGAATTGTCAAAACTGTGGTGGCACTTACA
CTTTACCGTATGAAACCGCAACATGCAACGCCGAACCGTCGTGCCCAGTA
ACGAACGTACTGCCCAGTGGATCATACACCAAGAATTGTTTGTTTCTCAA
CGCTAAATGTCAAGCTGATGGGCAAATAACTGCAACTTTATGCCCAATTC
ATGGTGGCTTTACCGAGTGGACATCTTGGGCAGGCTGTAATGC Run BLAST on NCBI transcript from alignment at sc0001782:21560..22702- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038142 ID=TCONS_00038142|Name=TCONS_00038142|organism=Clytia hemisphaerica|type=transcript|length=1143bp|location=Sequence derived from alignment at sc0001782:21560..22702- (Clytia hemisphaerica)
TTCAGGTGAATCCATTCCATTGAATTGTCAAAACTGTGGTGGCACTTACA
CTTTACCGTATGAAACCGCAACATGCAACGCCGAACCGTCGTGCCCAGTA
ACGAACGTACTGCCCAGTGGATCATACACCAAGAATTGTTTGTTTCTCAA
CGCTAAATGTCAAGCTGATGGGCAAATAACTGCAACTTTATGCCCAAGTA
AATCTATTTCAACTATACTTCTCAGAAAGGCCCTTAAAAGCACCAACATA
ATTCCGCTTGGGATTGACTTAAAAGGTCATAAAATATGCTGATGTCAGCA
AAAAATTTAAATTTATTGATTTACACCATCGAGCTTTACACCTTTGGTAA
AATTTTGAAGTCAAAAGCTTTCTTCTAGTAGAAGTTATTCAAATTCTTAT
ATGACGTCTTAAAATTCGTGACAATTGGCTAGAAAATTAGGTTTTTTCAA
ATTTTTCTACTTCTGTGTTTCCTCCAGTGGAATCAACGGTTATATAACTA
TTGGTGACATTTGGTGCTTTTTTGCAGAATCTTTGACACGTTGGGTCTTT
CGGGGTCTTTGTCAGAAATAATCACTTTAGTGAACACCTTTTTATTAGGG
ATACAAAAGACTAGATCTTCCAATTACACTTAGGCAAGACACTGACACAC
ATTTTGTTATATTTTGTCAATCTTGCGTGAACCACTAGGTTTGTCGGGCG
TGCACTCTCAGATCATCCATAGTTTAGTTAATTGTTACAACCCTTTACTC
TAAAAGAATATGCGAATGCTATAATCTGACTGGGTTGCCTTTTGCTTGAA
AACGAAAATGAAAACGACTGGGTTCTAATGTTAATGCATTGTTTAGATAT
ATGATTGACTAATTGGAAATTAATTTTGATTGGATTGTTTTCCTCAAAAG
CTCATTTATAATTCATCCCAAATTTGGACTAAGAAGATCAAAACGGTGTG
CCAAACTTGTTGATTGTCTTACGGAGTCGTAACCTTAGGAGTGGCGTAAG
TCCCAGAGAGGAATAATCAGGGCCTACTCGGAGAAGAATTTGATCACATT
TCTGATAGTTTTTTGTAAATACTTACTTACATGCACTTTATTTTCAGTTC
ATGGTGGCTTTACCGAGTGGACATCTTGGGCAGGCTGTAATGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038142-exon-sc0001782-1575043694:22506..22702 | TCONS_00038142-exon-sc0001782-1575043694:22506..22702 | Clytia hemisphaerica | exon |
| TCONS_00038142-exon-sc0001782-1575043694:21560..21605 | TCONS_00038142-exon-sc0001782-1575043694:21560..21605 | Clytia hemisphaerica | exon |
| TCONS_00038142-exon-sc0001782-1510915933:22506..22702 | TCONS_00038142-exon-sc0001782-1510915933:22506..22702 | Clytia hemisphaerica | exon |
| TCONS_00038142-exon-sc0001782-1510915933:21560..21605 | TCONS_00038142-exon-sc0001782-1510915933:21560..21605 | Clytia hemisphaerica | exon |
| TCONS_00038142-exon-sc0001782-1491911889:22506..22702 | TCONS_00038142-exon-sc0001782-1491911889:22506..22702 | Clytia hemisphaerica | exon |
| TCONS_00038142-exon-sc0001782-1491911889:21560..21605 | TCONS_00038142-exon-sc0001782-1491911889:21560..21605 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001782 | supercontig | sc0001782:21560..22702 - |
Blast
The following BLAST results are available for this feature:
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