TCONS_00038141 (transcript) - C. hemisphaerica

Overview
NameTCONS_00038141
Unique NameTCONS_00038141
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length118

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00038141 ID=TCONS_00038141|Name=TCONS_00038141|organism=Clytia hemisphaerica|type=transcript|length=118bp
CATCAGCTTGCAATACGGACCCTTGCCCAGttgaTGGCGTTTGGACGAAT
TGGGCGAACTGGGCTACATGTTCTTTGCCTTGCGGAACAGGATCGCAAAG
TCGAACAAGAACTTGTAC
Run BLAST on NCBI

transcript from alignment at sc0001782:20988..21452-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00038141 ID=TCONS_00038141|Name=TCONS_00038141|organism=Clytia hemisphaerica|type=transcript|length=465bp|location=Sequence derived from alignment at sc0001782:20988..21452- (Clytia hemisphaerica)
CATCAGCTTGCAATACGGACCCTTGCCCAGGTACGAATATTTTTCATGTT
CTTATGGTTTTGGTGATCTAAGCTTCTAGAGTCTGAGAAATTTTATAGCT
CGGCCTTATTTTGAATATTTTCGGTTGGCTAGGATATTTTAGGATCAATA
CTTGCTTGATTAACACTATTGCTCTCTCTGTCTTGAAAACATTAGGATAT
TTTTTTATTCCTCGAAAACTATTTTCGAGGCCTAGGGAGCAGTAAAAAAC
GGAAAAATAAGTTCGAGTAAGGCACGGCTCAAACCGCAAGCAAATATTAC
AAAAAAAGGTTCAGTAATGTACGTAACTCTATAAGACACATCTACCACAT
TACATAAATATTTTTGTTCTTTTAAAGTTGATGGCGTTTGGACGAATTGG
GCGAACTGGGCTACATGTTCTTTGCCTTGCGGAACAGGATCGCAAAGTCG
AACAAGAACTTGTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022790XLOC_022790Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038141-exon-sc0001782-1575043694:21423..21452TCONS_00038141-exon-sc0001782-1575043694:21423..21452Clytia hemisphaericaexon
TCONS_00038141-exon-sc0001782-1575043694:20988..21075TCONS_00038141-exon-sc0001782-1575043694:20988..21075Clytia hemisphaericaexon
TCONS_00038141-exon-sc0001782-1510915933:21423..21452TCONS_00038141-exon-sc0001782-1510915933:21423..21452Clytia hemisphaericaexon
TCONS_00038141-exon-sc0001782-1510915933:20988..21075TCONS_00038141-exon-sc0001782-1510915933:20988..21075Clytia hemisphaericaexon
TCONS_00038141-exon-sc0001782-1491911889:21423..21452TCONS_00038141-exon-sc0001782-1491911889:21423..21452Clytia hemisphaericaexon
TCONS_00038141-exon-sc0001782-1491911889:20988..21075TCONS_00038141-exon-sc0001782-1491911889:20988..21075Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001782supercontigsc0001782:20988..21452 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00038141 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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