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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038128 ID=TCONS_00038128|Name=TCONS_00038128|organism=Clytia hemisphaerica|type=transcript|length=889bp
aaaatttgcaaaaggtGGTTGTTGGTTAGTTTCTCTCGGTCGGCATACTG
CCCAGTCCACCTGTCCACTTGAATTAATCACAATCTTCCTTTTCTTTATA
TCTCTCAATCAAATGGTAATTGTTTGTACAGTTCGATTTCAATCCATTTG
GTTGGTGACTCGTCACTTGCTCAAAAGTTAAGGGTAACTTcttgttttga
actttttttaaatactgaGTTTTATTACAACCACCCAAATTTTCACTATG
CTCATAATGTGCATCGTGATTCTTCTCGCAACTACAATAGTGCAGTTAGC
TTTGCTTTCAAAACTGAGCCACCTGACCACGTTCTCTATTCTAAAGATCT
TTTTTATTCAGAAGCTCTCCATATGTgtcaaaactttaaattttcatcTT
ATGCATGTATTCTAGCTCTTTCTTCTGTCATAAAAACACAAATTAGGCGT
TGACCTGGGCAAATTTTCGTCTCAATTACCCTACAAGAATGGAAAGAACC
AGCAGGcacaatagaatttttttctagCTGGGGGTTTTCCTGGGGTGTCT
TCGTGCCAATCTAGTTCTTCCTTATCTTCTGTTATTTTTCTTCCTCTATT
CGTCTATTTTATGCTGAGATGACGACAAGTAAAGAAACTGCCAATGTTAT
CATATTTATTTCCTTGTGATAATCATATCCGCATGGTCTCTAGGCATACT
GACGAGCTCTGATATTGAACGAAACGGATCTATGTATGATTTTCTGAACA
ATAATACTTAAacatgttttctttcttttattttcatgtaTACAAATGTA
TGTGGATGAAGATAATCGTTATGGATTTTATTAACTCGCGCAttggtttt
tcatcaaatctGTTTTAACTAAATAAATATCTAAATAAA Run BLAST on NCBI transcript from alignment at sc0001779:33420..34308 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038128 ID=TCONS_00038128|Name=TCONS_00038128|organism=Clytia hemisphaerica|type=transcript|length=889bp|location=Sequence derived from alignment at sc0001779:33420..34308 (Clytia hemisphaerica)
TTTATTTAGATATTTATTTAGTTAAAACagatttgatgaaaaaccaaTGC
GCGAGTTAATAAAATCCATAACGATTATCTTCATCCACATACATTTGTAt
acatgaaaataaaagaaagaaaacatgtTTAAGTATTATTGTTCAGAAAA
TCATACATAGATCCGTTTCGTTCAATATCAGAGCTCGTCAGTATGCCTAG
AGACCATGCGGATATGATTATCACAAGGAAATAAATATGATAACATTGGC
AGTTTCTTTACTTGTCGTCATCTCAGCATAAAATAGACGAATAGAGGAAG
AAAAATAACAGAAGATAAGGAAGAACTAGATTGGCACGAAGACACCCCAG
GAAAACCCCCAGctagaaaaaaattctattgtgCCTGCTGGTTCTTTCCA
TTCTTGTAGGGTAATTGAGACGAAAATTTGCCCAGGTCAACGCCTAATTT
GTGTTTTTATGACAGAAGAAAGAGCTAGAATACATGCATAAgatgaaaat
ttaaagttttgacACATATGGAGAGCTTCTGAATAAAAAAGATCTTTAGA
ATAGAGAACGTGGTCAGGTGGCTCAGTTTTGAAAGCAAAGCTAACTGCAC
TATTGTAGTTGCGAGAAGAATCACGATGCACATTATGAGCATAGTGAAAA
TTTGGGTGGTTGTAATAAAACtcagtatttaaaaaaagttcaaaacaagA
AGTTACCCTTAACTTTTGAGCAAGTGACGAGTCACCAACCAAATGGATTG
AAATCGAACTGTACAAACAATTACCATTTGATTGAGAGATATAAAGAAAA
GGAAGATTGTGATTAATTCAAGTGGACAGGTGGACTGGGCAGTATGCCGA
CCGAGAGAAACTAACCAACAACCaccttttgcaaatttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038128-exon-sc0001779-1491911889:33420..34308 | TCONS_00038128-exon-sc0001779-1491911889:33420..34308 | Clytia hemisphaerica | exon |
| TCONS_00038128-exon-sc0001779-1510915933:33420..34308 | TCONS_00038128-exon-sc0001779-1510915933:33420..34308 | Clytia hemisphaerica | exon |
| TCONS_00038128-exon-sc0001779-1575043694:33420..34308 | TCONS_00038128-exon-sc0001779-1575043694:33420..34308 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001779 | supercontig | sc0001779:33420..34308 . |
Blast
The following BLAST results are available for this feature:
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