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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038125 ID=TCONS_00038125|Name=TCONS_00038125|organism=Clytia hemisphaerica|type=transcript|length=971bp
aaaatataaagttgTCAACAAAGAAATTATAAACTTTCTAGGTCAATAAA
TGATATTTCCCTTCAGTACCCTTCCCAatgaaaaaattggccaaaatgtc
GTCCCCTgcggaaaattatactctgatttttatccccactgaaaataatc
aaataactCAATTCTTACTGCAAAATGTGATGCCATTTTTCCTATCCCCA
cttaattttctgacttgaaaacaaaagaattgaaattccaaGCCATAAAA
ATAGCTGAAAAAATCCAATCGGGTCTGTAAGAAAAGAATGATTAAAGCAC
AAATAGGCTTGGGTCTCAAATAACTCGTTTTATGAAAACCTCAGGACGCA
TgcatcaattttcaaaacaagagcagtgcacGTTTCCCAAAGAGTAGGaa
ttttacgctcgaaacgaaggaagatatgacgtagcctacatTTTGGAGAG
CAACTCCAAGTTTTcgattgataaaaaataacattAGGTATAAAAGCGAT
TCAAAACTAATAATCTACCGAACTATGAATAAACCTATGTACacttttga
agctatttttacgattatgaattttattttgaattttacatTATTATAAA
AATAGGGGTAACATTCTGGGTACCCAGATGATCGGTCTTACGACATGTgc
tgcccttaagggtaggtttctCGAGATCCtggaaatgcactgtaagggtg
ttgTTTGCGGACTGCTGAATTGgaagtctgacagtaaaaatctgatgcat
ctttatagttttgaccaTTTAGATTTGTTTTGCACGTTGTGTCGACATCT
GAGGCTCATTTTCAGATGGCTTCAGGatatgaaaacaaactgcactgtaa
gggtcagaaacgtccactaaaattcattataagggtcagaaacgtccACT
AAAATTCATTATAAGGGTTCAATTTTGAAAGCTATTTctttggcggcaca
tgccgttgTTTTGGAATCGAG Run BLAST on NCBI transcript from alignment at sc0001779:18688..19658 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038125 ID=TCONS_00038125|Name=TCONS_00038125|organism=Clytia hemisphaerica|type=transcript|length=971bp|location=Sequence derived from alignment at sc0001779:18688..19658 (Clytia hemisphaerica)
CTCGATTCCAAAAcaacggcatgtgccgccaaagAAATAGCTTTCAAAAT
TGAACCCTTATAATGAATTTTAGTggacgtttctgacccttataatgaat
tttagtggacgtttctgacccttacagtgcagtttgttttcatatCCTGA
AGCCATCTGAAAATGAGCCTCAGATGTCGACACAACGTGCAAAACAAATC
TAAAtggtcaaaactataaagatgcatcagatttttactgtcagacttcC
AATTCAGCAGTCCGCAAAcaacacccttacagtgcatttccaGGATCTCG
agaaacctacccttaagggcagcACATGTCGTAAGACCGATCATCTGGGT
ACCCAGAATGTTACCCCTATTTTTATAATAatgtaaaattcaaaataaaa
ttcataatcgtaaaaatagcttcaaaagtGTACATAGGTTTATTCATAGT
TCGGTAGATTATTAGTTTTGAATCGCTTTTATACCTaatgttatttttta
tcaatcgAAAACTTGGAGTTGCTCTCCAAAatgtaggctacgtcatatct
tccttcgtttcgagcgtaaaattCCTACTCTTTGGGAAACgtgcactgct
cttgttttgaaaattgatgcATGCGTCCTGAGGTTTTCATAAAACGAGTT
ATTTGAGACCCAAGCCTATTTGTGCTTTAATCATTCTTTTCTTACAGACC
CGATTGGATTTTTTCAGCTATTTTTATGGCttggaatttcaattcttttg
ttttcaagtcagaaaattaagTGGGGATAGGAAAAATGGCATCACATTTT
GCAGTAAGAATTGagttatttgattattttcagtggggataaaaatcaga
gtataattttccgcAGGGGACgacattttggccaattttttcatTGGGAA
GGGTACTGAAGGGAAATATCATTTATTGACCTAGAAAGTTTATAATTTCT
TTGTTGAcaactttatatttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038125-exon-sc0001779-1491911889:18688..19658 | TCONS_00038125-exon-sc0001779-1491911889:18688..19658 | Clytia hemisphaerica | exon |
| TCONS_00038125-exon-sc0001779-1510915933:18688..19658 | TCONS_00038125-exon-sc0001779-1510915933:18688..19658 | Clytia hemisphaerica | exon |
| TCONS_00038125-exon-sc0001779-1575043694:18688..19658 | TCONS_00038125-exon-sc0001779-1575043694:18688..19658 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001779 | supercontig | sc0001779:18688..19658 . |
Blast
The following BLAST results are available for this feature:
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