TCONS_00038119 (transcript) - C. hemisphaerica

Overview
NameTCONS_00038119
Unique NameTCONS_00038119
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length176

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00038119 ID=TCONS_00038119|Name=TCONS_00038119|organism=Clytia hemisphaerica|type=transcript|length=176bp
CCTGTCAAAAATGTAACATCAACAAACATAAACCAAAAAGCTTGGATACA
GTGTGAAGTGGATATCAAAAGTGGATATACATATGAATTCATTTTCAATA
CTGACAGGGCTGATGACTCCAAAATCATTGTTCAACTTCCGCGCAATCAT
CATCATACAAGTAGGAAAGGAGAAAC
Run BLAST on NCBI

transcript from alignment at sc0001779:2..358+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00038119 ID=TCONS_00038119|Name=TCONS_00038119|organism=Clytia hemisphaerica|type=transcript|length=357bp|location=Sequence derived from alignment at sc0001779:2..358+ (Clytia hemisphaerica)
CCTGTCAAAAATGTAACATCAACAAACATAAACCAAAAAGCTTGGATACA
GTGTGAAGTGGATATCAAAAGTGGATATACATATGAATTCATTTTCAATA
CTGACAGGGCTGATGACTCCAAAATCATTGTTCAACTTCCGCGTAAGACT
TGTCTGGAAAATTTATCTAGGGAAAATCATTTTGAAGGTTAGGGGCTAGA
TACTTTTTGATATTCTCGTAATACtatcaattgaaaaaaatttaaaggaa
atagTGATCGGACTTTAACTATTTATGGGATCTGATTTTATTGTGACTTT
AGGAAACTCTCATTTCTTTCCAGGCAATCATCATCATACAAGTAGGAAAG
GAGAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022770XLOC_022770Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038119-exon-sc0001779-1491911889:2..143TCONS_00038119-exon-sc0001779-1491911889:2..143Clytia hemisphaericaexon
TCONS_00038119-exon-sc0001779-1510915933:2..143TCONS_00038119-exon-sc0001779-1510915933:2..143Clytia hemisphaericaexon
TCONS_00038119-exon-sc0001779-1575043694:2..143TCONS_00038119-exon-sc0001779-1575043694:2..143Clytia hemisphaericaexon
TCONS_00038119-exon-sc0001779-1491911889:325..358TCONS_00038119-exon-sc0001779-1491911889:325..358Clytia hemisphaericaexon
TCONS_00038119-exon-sc0001779-1510915933:325..358TCONS_00038119-exon-sc0001779-1510915933:325..358Clytia hemisphaericaexon
TCONS_00038119-exon-sc0001779-1575043694:325..358TCONS_00038119-exon-sc0001779-1575043694:325..358Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001779supercontigsc0001779:2..358 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00038119 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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