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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038076 ID=TCONS_00038076|Name=TCONS_00038076|organism=Clytia hemisphaerica|type=transcript|length=315bp
CGAAAATCTTTGTATTTTGCACAAAAAATTTATCGGATTctaaatattaa
aatcaaaatttatgataaaaaatcaatcaaatgaTGACGTAACACTATGG
AAATAGCTGAGTCAGTATGgctttttggaaatatttttgcttgttCCTTT
ATGTATTTGCATTGGCCTATTGCGCTGATATAAAGAAACATCATAATGTT
CATCACGAAGACTACACACACCGACAAAAAGTACGCCGACAACAAGTTAT
ACACCCGATAAACGAAAACGAATCATCATCGGTTAAAAATGACAACGACA
ATGATGAAGATATCG Run BLAST on NCBI transcript from alignment at sc0001767:6..1513- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038076 ID=TCONS_00038076|Name=TCONS_00038076|organism=Clytia hemisphaerica|type=transcript|length=1508bp|location=Sequence derived from alignment at sc0001767:6..1513- (Clytia hemisphaerica)
CGAAAATCTTTGTATTTTGCACAAAAAATTTATCGGATTCTAAATATTAA
AATCAAAATTTATGATAAAAAATCAATCAAATGATGACGTAACACTATGG
AAATAGCTGAGTCAGTATGGCTTTTTGGAAATATTTTTGCTTGTTCCTTT
ATGTATTTGCATTGGCCTATTGCGCTGATATAAGTGAGTGTTTTGCAGAA
TTTTTATTTTGGTACACATTTTTCGAAGCCCTAGGATGTTTAAAACTTTT
TTGAATTCCAAGCCTATAAATGTTCTTAAAATGTCCTTAATTTCACCATT
TTATTTGTATTTTGTGCTGTATTTCCTAAGAAATTGGGTGCTTTAGGGTC
CGTAAAGTCTTAAAATGTCCGTAACTTGTTCTTTTGATCATCGAAGCCTT
ATATTTTTATATATTTTTATCTCATAAAAATACGTGTATTCTGGACCGGG
AGCTAAAAACCTGAGGTAAAAAGTCTGTTTTTGTGGTTTTGAATCATACT
ACGAATCAAGATCGTTTCTTTCTTATAACTGGATTGTGGTTCGGGGTCAA
ATTGGATTTCTTTTCCAATTTTTCGAATACACGTTTTTTTTATAAGGAAC
CTTAACTTGGCTCCGAGCCTGGAGTTCCTTATTTTTCGAGAGAATTTCAG
CCTCAAAGTTTCTTATCCAGTTTCCTTATTTACTAAGCTGCTAAGATTGG
ATTTGCTAAGTATGTGACTTATGTATAAGTATAACAATGGACTAAAATGC
AAAAAGAGACGTTTATNATTTGCTAAGTATGTGACTTATGTATAAGTATA
ACAATGGACTAAAATGCAAAAAGAGACGTTTATTGAACGTTGTTTCGTCA
ACATTGTGTTATCTTTGTAAATGTGTGCAAATTCAAGTTTAACTCTCTGT
GACTTGACTTGTTTTGTTATTCTCAGTCTGAGCAGCTCCTTAACAATTCC
TAGTTTTTCGGACCATTTTGAGCCTCAAATTCCTTATAAACGTGTTCCTT
ATAAAAAAACGTGTACCGAAAAACACCTAAAGTAAACTTTTTAATTAAAT
AAAGTCAGCAATTTATTATTTGCTGTGTAAACCAATTTTTCACACATTTT
GGTCGAGTTAAGGAAGTTTCGAGTCAGGGAGTGGTCAGAAAGTATCTACT
AGGGGGTGGAGGATTCTAGGCGGGTTTATTTACTTGAATACATTTAAAAT
ATCCACACCCTTTATAGAGTAAGGTTGATAAGGCATTGTTAACTGAAGGG
ACAAGAAAACTTGTTCGAGTTCAGATATGAGACATTCCAGTTATAAGGGT
TCGAGTTAAAGTCTCCACTGTATCTATAATATATTTACACCTGTGACCGA
ACGAGAATTCTCTTCATATTCTTCAGAGAAACATCATAATGTTCATCACG
AAGACTACACACACCGACAAAAAGTACGCCGACAACAAGTTATACACCCG
ATAAACGAAAACGAATCATCATCGGTTAAAAATGACAACGACAATGATGA
AGATATCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038076-exon-sc0001767-1575043694:1331..1513 | TCONS_00038076-exon-sc0001767-1575043694:1331..1513 | Clytia hemisphaerica | exon |
| TCONS_00038076-exon-sc0001767-1575043694:6..137 | TCONS_00038076-exon-sc0001767-1575043694:6..137 | Clytia hemisphaerica | exon |
| TCONS_00038076-exon-sc0001767-1510915933:1331..1513 | TCONS_00038076-exon-sc0001767-1510915933:1331..1513 | Clytia hemisphaerica | exon |
| TCONS_00038076-exon-sc0001767-1510915933:6..137 | TCONS_00038076-exon-sc0001767-1510915933:6..137 | Clytia hemisphaerica | exon |
| TCONS_00038076-exon-sc0001767-1491911889:1331..1513 | TCONS_00038076-exon-sc0001767-1491911889:1331..1513 | Clytia hemisphaerica | exon |
| TCONS_00038076-exon-sc0001767-1491911889:6..137 | TCONS_00038076-exon-sc0001767-1491911889:6..137 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001767 | supercontig | sc0001767:6..1513 - |
Blast
The following BLAST results are available for this feature:
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