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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038071 ID=TCONS_00038071|Name=TCONS_00038071|organism=Clytia hemisphaerica|type=transcript|length=960bp
CAATTTTTCAACCTTCGACAGAGTGACTGTGAGAGCGTGACATCATTCAT
CTCACGTCTCAAAGCACAAGCCATGCTATGCGATTTTAAAACGAACGGAA
GTTGTGAATCCGATGATTGCTCCCCATCCTACGCCTCCGATATGATCCGC
TCCCAATTAATCGCTGGCATACGCAACCCAACCCATCAATCCAAAGTATT
AACAGAAATCGCATCTCTGCAAACACTTGAAGATTTGACCACCCGTCTCC
TTGCCCTTGAAGCCACAGATCGCGCATCAACCCAATTCAGATCACCGTTC
GAAAATACTCCATCCGACGTCGCATATGTCAAATCGTCGTCATTCAAGCC
GAGAAGACCAACCGACCAAAAAAAACAATGCTCTGGATGTGGTAAACCAA
TGCACCCAAACGGACGCTCTACATGCCCCGCCTGGCANCTCTGGATGTGG
TAAACCAATGCACCCAAACGGACGCTCTACATGCCCCGCCTGGCAAAAAG
TCTGTCATAAATGCAAGAAACCAAACCATTTCGCGAACGTCTGTCGCAGC
CCCTCATCATCATCCGTCGCACCTATTAGTGAAGACTCGGAACCAACTGT
CTCCCATCTATCATCGATCAACGCCAACCCCATCTGACTATATGATATCC
CACACGGAAATTTGACAAACGGACATTTACATAAACAACCACCCGAACTC
TCGCCAAGACTGGACattgaaataaatattaatATCCCAGCCTACCGACA
AATACGTaagaccgaaaaaaaattgccgCACAGACCACAAACATTTACTA
CAGACGCTATCGCAGACACCGGCGCACAGACTTGTACAACCGGACTGCAC
ATCCTTCAAACCATCCCCGAAGAATGGTTGATACCAACAAAACACAAACT
AAGAGGTGTTGATAATAATTCCCTACCAATCAAAGGGGTGTTATTCGTCG
ATATCTCAAC Run BLAST on NCBI protein sequence of TCONS_00038071-protein >TCONS_00038071-protein ID=TCONS_00038071-protein|Name=TCONS_00038071-protein|organism=Clytia hemisphaerica|type=polypeptide|length=150bp
QFFNLRQSDCESVTSFISRLKAQAMLCDFKTNGSCESDDCSPSYASDMIR
SQLIAGIRNPTHQSKVLTEIASLQTLEDLTTRLLALEATDRASTQFRSPF
ENTPSDVAYVKSSSFKPRRPTDQKKQCSGCGKPMHPNGRSTCPAWXLWMW Run BLAST on NCBI transcript from alignment at sc0001766:40686..41645 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038071 ID=TCONS_00038071|Name=TCONS_00038071|organism=Clytia hemisphaerica|type=transcript|length=960bp|location=Sequence derived from alignment at sc0001766:40686..41645 (Clytia hemisphaerica)
GTTGAGATATCGACGAATAACACCCCTTTGATTGGTAGGGAATTATTATC
AACACCTCTTAGTTTGTGTTTTGTTGGTATCAACCATTCTTCGGGGATGG
TTTGAAGGATGTGCAGTCCGGTTGTACAAGTCTGTGCGCCGGTGTCTGCG
ATAGCGTCTGTAGTAAATGTTTGTGGTCTGTGcggcaattttttttcggt
cttACGTATTTGTCGGTAGGCTGGGATattaatatttatttcaatGTCCA
GTCTTGGCGAGAGTTCGGGTGGTTGTTTATGTAAATGTCCGTTTGTCAAA
TTTCCGTGTGGGATATCATATAGTCAGATGGGGTTGGCGTTGATCGATGA
TAGATGGGAGACAGTTGGTTCCGAGTCTTCACTAATAGGTGCGACGGATG
ATGATGAGGGGCTGCGACAGACGTTCGCGAAATGGTTTGGTTTCTTGCAT
TTATGACAGACTTTTTGCCAGGCGGGGCATGTAGAGCGTCCGTTTGGGTG
CATTGGTTTACCACATCCAGAGNTGCCAGGCGGGGCATGTAGAGCGTCCG
TTTGGGTGCATTGGTTTACCACATCCAGAGCATTGTTTTTTTTGGTCGGT
TGGTCTTCTCGGCTTGAATGACGACGATTTGACATATGCGACGTCGGATG
GAGTATTTTCGAACGGTGATCTGAATTGGGTTGATGCGCGATCTGTGGCT
TCAAGGGCAAGGAGACGGGTGGTCAAATCTTCAAGTGTTTGCAGAGATGC
GATTTCTGTTAATACTTTGGATTGATGGGTTGGGTTGCGTATGCCAGCGA
TTAATTGGGAGCGGATCATATCGGAGGCGTAGGATGGGGAGCAATCATCG
GATTCACAACTTCCGTTCGTTTTAAAATCGCATAGCATGGCTTGTGCTTT
GAGACGTGAGATGAATGATGTCACGCTCTCACAGTCACTCTGTCGAAGGT
TGAAAAATTG Coding sequence (CDS) from alignment at sc0001766:40686..41645 >TCONS_00038071 ID=TCONS_00038071|Name=TCONS_00038071|organism=Clytia hemisphaerica|type=CDS|length=453bp|location=Sequence derived from alignment at sc0001766:40686..41645 (Clytia hemisphaerica)
TTACCACATCCAGAGNTGCCAGGCGGGGCATGTAGAGCGTCCGTTTGGGT
GCATTGGTTTACCACATCCAGAGCATTGTTTTTTTTGGTCGGTTGGTCTT
CTCGGCTTGAATGACGACGATTTGACATATGCGACGTCGGATGGAGTATT
TTCGAACGGTGATCTGAATTGGGTTGATGCGCGATCTGTGGCTTCAAGGG
CAAGGAGACGGGTGGTCAAATCTTCAAGTGTTTGCAGAGATGCGATTTCT
GTTAATACTTTGGATTGATGGGTTGGGTTGCGTATGCCAGCGATTAATTG
GGAGCGGATCATATCGGAGGCGTAGGATGGGGAGCAATCATCGGATTCAC
AACTTCCGTTCGTTTTAAAATCGCATAGCATGGCTTGTGCTTTGAGACGT
GAGATGAATGATGTCACGCTCTCACAGTCACTCTGTCGAAGGTTGAAAAA
TTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038071-exon-sc0001766-1491911889:40686..41645 | TCONS_00038071-exon-sc0001766-1491911889:40686..41645 | Clytia hemisphaerica | exon |
| TCONS_00038071-exon-sc0001766-1510915933:40686..41645 | TCONS_00038071-exon-sc0001766-1510915933:40686..41645 | Clytia hemisphaerica | exon |
| TCONS_00038071-exon-sc0001766-1575043694:40686..41645 | TCONS_00038071-exon-sc0001766-1575043694:40686..41645 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001766 | supercontig | sc0001766:40686..41645 . |
Blast
The following BLAST results are available for this feature:
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