TCONS_00038069 (transcript) - C. hemisphaerica

Overview
NameTCONS_00038069
Unique NameTCONS_00038069
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length160

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00038069 ID=TCONS_00038069|Name=TCONS_00038069|organism=Clytia hemisphaerica|type=transcript|length=160bp
CCCCGAGATTATACTTAATCTCGAGCTTCTCttaaagcacaaaaagaaga
aaaagcgCAAGAACAAAAGCTGGAGCCAAAGAAGGAATGCAGTAGAGGAG
AAATGGGAAGAACACAGGGAAGACATATTGTCAGCGGTGATCCTTAACAA
CAGTTTCGAC
Run BLAST on NCBI

transcript from alignment at sc0001766:35039..35198

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00038069 ID=TCONS_00038069|Name=TCONS_00038069|organism=Clytia hemisphaerica|type=transcript|length=160bp|location=Sequence derived from alignment at sc0001766:35039..35198 (Clytia hemisphaerica)
GTCGAAACTGTTGTTAAGGATCACCGCTGACAATATGTCTTCCCTGTGTT
CTTCCCATTTCTCCTCTACTGCATTCCTTCTTTGGCTCCAGCTTTTGTTC
TTGcgctttttcttctttttgtgctttaaGAGAAGCTCGAGATTAAGTAT
AATCTCGGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022728XLOC_022728Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038069-exon-sc0001766-1491911889:35039..35198TCONS_00038069-exon-sc0001766-1491911889:35039..35198Clytia hemisphaericaexon
TCONS_00038069-exon-sc0001766-1510915933:35039..35198TCONS_00038069-exon-sc0001766-1510915933:35039..35198Clytia hemisphaericaexon
TCONS_00038069-exon-sc0001766-1575043694:35039..35198TCONS_00038069-exon-sc0001766-1575043694:35039..35198Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001766supercontigsc0001766:35039..35198 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00038069 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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