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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038061 ID=TCONS_00038061|Name=TCONS_00038061|organism=Clytia hemisphaerica|type=transcript|length=1187bp
aaactatGAAGATTTTATCTACAGGAATAGAAATCTTTAATTTACGTGTT
ttctaaaacttcaaacttcgctgatttcaaatatgtattcAGATGTATtc
atattttggccatttttagcGTTCTTTggagggctgtaacttttggtATC
AGACAGATATGAAAATTCTgaatacatatttgaaatcagccaagtttgaa
gttttagaaaaacaaattagCTCAGTTTCAGTCGGGACCGCTTGCAGTAT
ACAAAGATAATATCCTATATTATCTCTTAACCTTTAGAAGCTGAGGGACG
TACACAGCGTACGTCGTATATACAGGTCGAGAGATGTACCACGTACGTTC
TCATATATGACCTTCTTTGAAGTAAAATAAAACCAAGacaaatgaagatt
ttaaaatttttgtaaacaactATCTGTGGAGAGAAAGATGTTCTaacact
gtgcaaaaaattacgAGTCTTGTTTTTGTACATCAAAAGATATCGCGGCT
CAATTGCGACTCAATATTGGTGCATAAACAattcttttacatttttatca
aatgtGGTTGTTTGCTGGCTAAATGGGTTTTGAACTATGTTTTATCCACt
tttttgtgttattttgttGTAAGTTTAGTGAATATGAGATAAAGAAACTT
TCAAGGCAGTGTTGAGGGGAGATATTGCAATTGATTTTGGTTTAGAGGTC
CAGACAGTGAACTAAGAGGCTTATTTCGTGCTAAAATAATCTGTCGTGTG
CATCAGGTCGTTTTTTGTGTAAAAGTTTGGCTCACAATAAACATGGATTC
TGATAGACCATGGCTATGAAATATCCTTagtgtttggaaaataaaagttT
CATTTACAAGAGCTCTCCCCCAATTTCTCGATTGTTTCGAAATTCaccga
aaaagtgaaaaacgcAAAAGCGTAAAAAAAGTCATTGTATCTAAcaagct
ttttttctttttattgccTAATAGAGCAATGACAGAGCTTTCCAAAATGG
GCTCATTTGTCTGtttaactcaatttttttgGTTGGACAAATTTCAAATC
AGTCGTGTTTTAGCCTATCCAAGAATctatatttctcaaaaatttctcCA
TCGGACCAACCATGTTGGGTTCCTACTCTTAGGTGTCAAATAAACGgggt
tttcgaaattttaataaacgggagggacctaatagcc Run BLAST on NCBI transcript from alignment at sc0001765:35937..37123 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038061 ID=TCONS_00038061|Name=TCONS_00038061|organism=Clytia hemisphaerica|type=transcript|length=1187bp|location=Sequence derived from alignment at sc0001765:35937..37123 (Clytia hemisphaerica)
ggctattaggtccctcccgtttattaaaatttcgaaaacccCGTTTATTT
GACACCTAAGAGTAGGAACCCAACATGGTTGGTCCGATGgagaaattttt
gagaaatatagATTCTTGGATAGGCTAAAACACGACTGATTTGAAATTTG
TCCAACcaaaaaaattgagttaaaCAGACAAATGAGCCCATTTTGGAAAG
CTCTGTCATTGCTCTATTAggcaataaaaagaaaaaaagcttgTTAGATA
CAATGACTTTTTTTACGCTTTTgcgtttttcactttttcggtGAATTTCG
AAACAATCGAGAAATTGGGGGAGAGCTCTTGTAAATGAaacttttatttt
ccaaacactAAGGATATTTCATAGCCATGGTCTATCAGAATCCATGTTTA
TTGTGAGCCAAACTTTTACACAAAAAACGACCTGATGCACACGACAGATT
ATTTTAGCACGAAATAAGCCTCTTAGTTCACTGTCTGGACCTCTAAACCA
AAATCAATTGCAATATCTCCCCTCAACACTGCCTTGAAAGTTTCTTTATC
TCATATTCACTAAACTTACaacaaaataacacaaaaaaGTGGATAAAACA
TAGTTCAAAACCCATTTAGCCAGCAAACAACCacatttgataaaaatgta
aaagaatTGTTTATGCACCAATATTGAGTCGCAATTGAGCCGCGATATCT
TTTGATGTACAAAAACAAGACTcgtaattttttgcacagtgttAGAACAT
CTTTCTCTCCACAGATagttgtttacaaaaattttaaaatcttcatttgt
CTTGGTTTTATTTTACTTCAAAGAAGGTCATATATGAGAACGTACGTGGT
ACATCTCTCGACCTGTATATACGACGTACGCTGTGTACGTCCCTCAGCTT
CTAAAGGTTAAGAGATAATATAGGATATTATCTTTGTATACTGCAAGCGG
TCCCGACTGAAACTGAGctaatttgtttttctaaaacttcaaacttggct
gatttcaaatatgtattcAGAATTTTCATATCTGTCTGATaccaaaagtt
acagccctccAAAGAACgctaaaaatggccaaaatatgaATACATCTgaa
tacatatttgaaatcagcgaagtttgaagttttagaaAACACGTAAATTA
AAGATTTCTATTCCTGTAGATAAAATCTTCatagttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038061-exon-sc0001765-1491911889:35937..37123 | TCONS_00038061-exon-sc0001765-1491911889:35937..37123 | Clytia hemisphaerica | exon |
| TCONS_00038061-exon-sc0001765-1510915933:35937..37123 | TCONS_00038061-exon-sc0001765-1510915933:35937..37123 | Clytia hemisphaerica | exon |
| TCONS_00038061-exon-sc0001765-1575043694:35937..37123 | TCONS_00038061-exon-sc0001765-1575043694:35937..37123 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001765 | supercontig | sc0001765:35937..37123 . |
Blast
The following BLAST results are available for this feature:
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