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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038060 ID=TCONS_00038060|Name=TCONS_00038060|organism=Clytia hemisphaerica|type=transcript|length=1554bp
gtttatttggcacctaagagtaagtgAATAAATTTACACTTAACACAAAA
TTACCACTGGAAAAATTCCTTTAATTTGTGTTTTCAAATTACTGGGATTG
GAAAAACTAGAACATCAATCATATCTGACTCTTCAATGCTGTATTTGTCA
ATGTAAAGGTGCTGACTTTCAAATATTCTCTCCTTGGTACTAACCATGGT
GGGACCTCGAAAACTTAGCAAGATCTTCAAGTTCAAGTAATTTTATCATA
GGTGTGTTAAGTCAATGAGGCTACAATAAACAATAAATATCTGAAACCTG
ACAACAAATGTTACATGTAACAAAATAGTCTGGTTTTACTGTCTGAATGG
TCACCACAGTCCCTTTTGCTTTTTTAAGTCAGGGAAAATAGCCGTGTCAA
GCACATTTTTCAGGGAAAAAGGCTGTTTTTCAGCAAAAGGTCAGGGATAA
TAAAACTCAAGGATAATAAAACTCAAGGATAATAAAACTCAAGGATTGCT
GGGAACCCTGGCTGGACACGATAACGAGGCGTCATTTTCCAGCATTTTCC
GACAAAAACAAACATAACAATAGTTTTGATGATCCGCCACACAACAAATT
TTTGTTGTAATTTTTTAATGCGGCAAAGTTATATACgtcagatggttaat
tttcatCAGTTATTTAGAGGTTTATCGTGCTGATAAGAAAGTTCTaccat
ctgttatcaggttagctgTACACTGTATATTCGATATACTTTATTAATTC
TAAGAAAGAAATATATCCGATATACAGACAGATACAGAGGCCTCTGGGCG
CACACTGTGTTTTGGACTATCACCGTAAGCAGGCTTAAAATTAAATCAAC
ACTGATAAGTATTTTTCAGTTCAGTAAAATGTAGTCTACTCAACTAAGTT
TAAAGTTCAACTTTTCGCAGGTCTTGTTTTTGTGCATCCTGAGATATAGC
AACTCAATGTTAGTTATTTTTggagcaaaaataaaaaaaaaccaaGTTTT
TTGGAACTTGTGGTTGTTTGATGGCTTTTTGGTTTTAATAACTGTTGTTT
ATCcactttttgtgttttttttttttatactacaaatgctataaaatttg
ataaatgggTAAAGGTCATATTTATATTGGGATGATGAAAAATATAAGCC
AGTGTTTAGGGGGACATGCATGGTACAATATCTAAAAGATTTATAATATA
CACTTTGAGTAGCTGCATGAAGTCTAGGGTCATTGTGACtgttttttact
gattttgttTTTTGCCCTATTTTACTTTTCTAGATGTCATTAATAAATTT
GTCTGTTATTTGGTTTACTTTACTTATCTATTTACTTTTGTATTACACAA
AAATTAacaattatttattttaataattggtccacacaaaaatttatata
tgtcgaaaatttattgataattcGAAAAATTTTATTCGGCACTTGAAAGT
GATTATGGAACAGATTTGCCATAATATCAGTTATTATTGTTTATGAATGT
ATTCAGTAATGTTTTAACAATACTAGTtaccaaataaacaaaaagatgcA
AAGT Run BLAST on NCBI transcript from alignment at sc0001765:33911..35464 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038060 ID=TCONS_00038060|Name=TCONS_00038060|organism=Clytia hemisphaerica|type=transcript|length=1554bp|location=Sequence derived from alignment at sc0001765:33911..35464 (Clytia hemisphaerica)
ACTTTgcatctttttgtttatttggtaACTAGTATTGTTAAAACATTACT
GAATACATTCATAAACAATAATAACTGATATTATGGCAAATCTGTTCCAT
AATCACTTTCAAGTGCCGAATAAAATTTTTCgaattatcaataaattttc
gacatatataaatttttgtgtggaccaattattaaaataaataattgtTA
ATTTTTGTGTAATACAAAAGTAAATAGATAAGTAAAGTAAACCAAATAAC
AGACAAATTTATTAATGACATCTAGAAAAGTAAAATAGGGCAAAAaacaa
aatcagtaaaaaacaGTCACAATGACCCTAGACTTCATGCAGCTACTCAA
AGTGTATATTATAAATCTTTTAGATATTGTACCATGCATGTCCCCCTAAA
CACTGGCTTATATTTTTCATCATCCCAATATAAATATGACCTTTAcccat
ttatcaaattttatagcatttgtagtataaaaaaaaaaaacacaaaaagt
gGATAAACAACAGTTATTAAAACCAAAAAGCCATCAAACAACCACAAGTT
CCAAAAAACttggtttttttttatttttgctccAAAAATAACTAACATTG
AGTTGCTATATCTCAGGATGCACAAAAACAAGACCTGCGAAAAGTTGAAC
TTTAAACTTAGTTGAGTAGACTACATTTTACTGAACTGAAAAATACTTAT
CAGTGTTGATTTAATTTTAAGCCTGCTTACGGTGATAGTCCAAAACACAG
TGTGCGCCCAGAGGCCTCTGTATCTGTCTGTATATCGGATATATTTCTTT
CTTAGAATTAATAAAGTATATCGAATATACAGTGTAcagctaacctgata
acagatggtAGAACTTTCTTATCAGCACGATAAACCTCTAAATAACTGat
gaaaattaaccatctgacGTATATAACTTTGCCGCATTAAAAAATTACAA
CAAAAATTTGTTGTGTGGCGGATCATCAAAACTATTGTTATGTTTGTTTT
TGTCGGAAAATGCTGGAAAATGACGCCTCGTTATCGTGTCCAGCCAGGGT
TCCCAGCAATCCTTGAGTTTTATTATCCTTGAGTTTTATTATCCTTGAGT
TTTATTATCCCTGACCTTTTGCTGAAAAACAGCCTTTTTCCCTGAAAAAT
GTGCTTGACACGGCTATTTTCCCTGACTTAAAAAAGCAAAAGGGACTGTG
GTGACCATTCAGACAGTAAAACCAGACTATTTTGTTACATGTAACATTTG
TTGTCAGGTTTCAGATATTTATTGTTTATTGTAGCCTCATTGACTTAACA
CACCTATGATAAAATTACTTGAACTTGAAGATCTTGCTAAGTTTTCGAGG
TCCCACCATGGTTAGTACCAAGGAGAGAATATTTGAAAGTCAGCACCTTT
ACATTGACAAATACAGCATTGAAGAGTCAGATATGATTGATGTTCTAGTT
TTTCCAATCCCAGTAATTTGAAAACACAAATTAAAGGAATTTTTCCAGTG
GTAATTTTGTGTTAAGTGTAAATTTATTcacttactcttaggtgccaaat
aaac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038060-exon-sc0001765-1491911889:33911..35464 | TCONS_00038060-exon-sc0001765-1491911889:33911..35464 | Clytia hemisphaerica | exon |
| TCONS_00038060-exon-sc0001765-1510915933:33911..35464 | TCONS_00038060-exon-sc0001765-1510915933:33911..35464 | Clytia hemisphaerica | exon |
| TCONS_00038060-exon-sc0001765-1575043694:33911..35464 | TCONS_00038060-exon-sc0001765-1575043694:33911..35464 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001765 | supercontig | sc0001765:33911..35464 . |
Blast
The following BLAST results are available for this feature:
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