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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038058 ID=TCONS_00038058|Name=TCONS_00038058|organism=Clytia hemisphaerica|type=transcript|length=930bp
ATTTCTGAGACATAGAAGTGGGTTTCAATTGTGGAATAGATTGTTTGACA
GTCTTTGAGACAGCTTTCTTTGAAGCCGCCTTTTTAGGACAACCTTTTTG
TTGACTGTCTTTTCTGGGATAACAGTTTTTGATACAGTTTTCATCACAGC
AGGTTTTTTGGCGTTATCTAGGTACTTTTACGTAGGTTTTTCTCAACTGG
TCGtggtttgaattttttctctttatttctatttgtttatattttttatt
gttgttggtAGCTTTGGTAATAAATGAAAATGGGTGTTTTCTTTCGCTAT
AACCCATCATAGTAAAGGAAGCTGATAgccaattatttttcaaaatgagg
tattttttggggcaaattgaAACCTATAATTCATCCAATTCTTCCATTGT
AAGAATTAATATCAGAATTATCACTAGACTACAAACTAGGCTTGCTCGAT
AGACAATTTTATGAAACGTAATCTCCTTTTTTAATATCTAAACAAAGCGA
AAACCGAATATTTTAGCCTTAATTTTCTTGACCTTTCACAAAGTATCAAA
TCTTTTTCGGGCACCATATTAATGGCTCTGACcttagtgaatttttcata
tttgtcatgtataaaattaaaatgtatttttctgaCTAATCTACGCAGCA
AAACCATGACATGTTAtaaatacattttctgttaggacAACTATCCCTGa
atctaaaaagtaaaaatcgcgaTGAAAAAAGACTGAAGacaagtatttca
actttgaggaccttattttcggcgaagaaaaaagattttaaaaagacTTT
GAGTGCGAGATGTATCTTTAGCCAAACTGAAAGtagattttcggaaattt
tttgttaaaagtttcttcgtctcaaaatcttgaaaatagtagtttttgat
cagttttgatacatcaatttggaaaatttt Run BLAST on NCBI transcript from alignment at sc0001765:7275..8204 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038058 ID=TCONS_00038058|Name=TCONS_00038058|organism=Clytia hemisphaerica|type=transcript|length=930bp|location=Sequence derived from alignment at sc0001765:7275..8204 (Clytia hemisphaerica)
aaaattttccaaattgatgtatcaaaactgatcaaaaactactattttca
agattttgagacgaagaaacttttaacaaaaaatttccgaaaatctaCTT
TCAGTTTGGCTAAAGATACATCTCGCACTCAAAgtctttttaaaatcttt
tttcttcgccgaaaataaggtcctcaaagttgaaatacttgtCTTCAGTC
TTTTTTCAtcgcgatttttactttttagattCAGGGATAGTTgtcctaac
agaaaatgtatttaTAACATGTCATGGTTTTGCTGCGTAGATTAGtcaga
aaaatacattttaattttatacatgacaaatatgaaaaattcactaagGT
CAGAGCCATTAATATGGTGCCCGAAAAAGATTTGATACTTTGTGAAAGGT
CAAGAAAATTAAGGCTAAAATATTCGGTTTTCGCTTTGTTTAGATATTAA
AAAAGGAGATTACGTTTCATAAAATTGTCTATCGAGCAAGCCTAGTTTGT
AGTCTAGTGATAATTCTGATATTAATTCTTACAATGGAAGAATTGGATGA
ATTATAGGTTtcaatttgccccaaaaaatacctcattttgaaaaataatt
ggcTATCAGCTTCCTTTACTATGATGGGTTATAGCGAAAGAAAACACCCA
TTTTCATTTATTACCAAAGCTaccaacaacaataaaaaatataaacaaat
agaaataaagagaaaaaattcaaaccaCGACCAGTTGAGAAAAACCTACG
TAAAAGTACCTAGATAACGCCAAAAAACCTGCTGTGATGAAAACTGTATC
AAAAACTGTTATCCCAGAAAAGACAGTCAACAAAAAGGTTGTCCTAAAAA
GGCGGCTTCAAAGAAAGCTGTCTCAAAGACTGTCAAACAATCTATTCCAC
AATTGAAACCCACTTCTATGTCTCAGAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038058-exon-sc0001765-1491911889:7275..8204 | TCONS_00038058-exon-sc0001765-1491911889:7275..8204 | Clytia hemisphaerica | exon |
| TCONS_00038058-exon-sc0001765-1510915933:7275..8204 | TCONS_00038058-exon-sc0001765-1510915933:7275..8204 | Clytia hemisphaerica | exon |
| TCONS_00038058-exon-sc0001765-1575043694:7275..8204 | TCONS_00038058-exon-sc0001765-1575043694:7275..8204 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001765 | supercontig | sc0001765:7275..8204 . |
Blast
The following BLAST results are available for this feature:
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