|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038046 ID=TCONS_00038046|Name=TCONS_00038046|organism=Clytia hemisphaerica|type=transcript|length=1125bp
aataattcttaaaaatagaaacacaacAACAGGATTACAAtcacataaaa
agtaaatacaGCATTTGCGTTTTTTACTTCagttgtttttcttcttcagc
aTCTGAATCGCTGACAAGGCTGATTGGgttgttgatctttgtttttgttt
tacgtAGAGGTATTTTCGGCAGTTTAGGCTTTATTTCGAAGTCCGAAATA
TCTTCGTCTTCACCAGGAACAGCAGAAGATGGCATTGGTAGCTGCTTAGC
TGgagttttcttttttggttCCACGTCACCTTCCGTCTCCGATTCGTCAC
TCAGCGAGATTGGGTTAAGAATCTTGCTTTCTGTCTTTCGGCATGGCTGC
CGCCTGATCGTTGGTTTTACATCTTCCTCAGAATCGTCACTGAGAACAAT
AGGATTTGAGATCTCACTTGCAGTTTTACGGCATGGCGGCTGGCGTAGAT
CAGGCTTTATATCTTCAACAGCTGTCGAGATAGTCGGTAGATCTGTTGGT
AACTTCTGGGACTTTTGTTTTCTCTCAGGTATTTCATCCTCACTGTCCGA
ATCGGTAAACAATAGTCTTGGCAACCCCTTCTTGGATGACTTTTTGCTTT
TTCCATCCAAGTCACTTCGCGAACAATCGTTTGTTTTGGACTTTTTTGCT
TGGTTGAGCATTTCTTCTTCGCTCGTCGAGGTAGTGAAATTTATGGAATC
ACTATCATTGTTTGTGTCGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGTAAACGGTTTTGTGACCCTTTAGGCCTACTTAACCATccctgaaagtt
tcaaaaagtcCCGAgtgttatttgatttttttggcgCTCTGCTCCCTGAC
TATCTTGTCAGCCGTCGCCCCATGTTGACGTTTACGTTTTAGAGGACTGA
ATTTGATTATTCTTGGCTGCGCTGAAGACTTTCCAACGCATTTATTCAAT
GGAGTGCTGGTAGTgacggctggggacagtagttgaTCTGGTTCTGGACT
TGTTGCTTTTTCTGGTGTTTCGAGTATTACTGTGGTTTGCTTTCTTGATT
CTCTGATCAACCAGGCTTCGTAGAAGGTATCTGCACCACGCCACTTCCTT
CTCTTTCTGATTTGGTATCTGTAGA Run BLAST on NCBI transcript from alignment at sc0001764:62038..63162- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038046 ID=TCONS_00038046|Name=TCONS_00038046|organism=Clytia hemisphaerica|type=transcript|length=1125bp|location=Sequence derived from alignment at sc0001764:62038..63162- (Clytia hemisphaerica)
AATAATTCTTAAAAATAGAAACACAACAACAGGATTACAATCACATAAAA
AGTAAATACAGCATTTGCGTTTTTTACTTCAGTTGTTTTTCTTCTTCAGC
ATCTGAATCGCTGACAAGGCTGATTGGGTTGTTGATCTTTGTTTTTGTTT
TACGTAGAGGTATTTTCGGCAGTTTAGGCTTTATTTCGAAGTCCGAAATA
TCTTCGTCTTCACCAGGAACAGCAGAAGATGGCATTGGTAGCTGCTTAGC
TGGAGTTTTCTTTTTTGGTTCCACGTCACCTTCCGTCTCCGATTCGTCAC
TCAGCGAGATTGGGTTAAGAATCTTGCTTTCTGTCTTTCGGCATGGCTGC
CGCCTGATCGTTGGTTTTACATCTTCCTCAGAATCGTCACTGAGAACAAT
AGGATTTGAGATCTCACTTGCAGTTTTACGGCATGGCGGCTGGCGTAGAT
CAGGCTTTATATCTTCAACAGCTGTCGAGATAGTCGGTAGATCTGTTGGT
AACTTCTGGGACTTTTGTTTTCTCTCAGGTATTTCATCCTCACTGTCCGA
ATCGGTAAACAATAGTCTTGGCAACCCCTTCTTGGATGACTTTTTGCTTT
TTCCATCCAAGTCACTTCGCGAACAATCGTTTGTTTTGGACTTTTTTGCT
TGGTTGAGCATTTCTTCTTCGCTCGTCGAGGTAGTGAAATTTATGGAATC
ACTATCATTGTTTGTGTCGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGTAAACGGTTTTGTGACCCTTTAGGCCTACTTAACCATCCCTGAAAGTT
TCAAAAAGTCCCGAGTGTTATTTGATTTTTTTGGCGCTCTGCTCCCTGAC
TATCTTGTCAGCCGTCGCCCCATGTTGACGTTTACGTTTTAGAGGACTGA
ATTTGATTATTCTTGGCTGCGCTGAAGACTTTCCAACGCATTTATTCAAT
GGAGTGCTGGTAGTGACGGCTGGGGACAGTAGTTGATCTGGTTCTGGACT
TGTTGCTTTTTCTGGTGTTTCGAGTATTACTGTGGTTTGCTTTCTTGATT
CTCTGATCAACCAGGCTTCGTAGAAGGTATCTGCACCACGCCACTTCCTT
CTCTTTCTGATTTGGTATCTGTAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038046-exon-sc0001764-1575043694:62038..63162 | TCONS_00038046-exon-sc0001764-1575043694:62038..63162 | Clytia hemisphaerica | exon |
| TCONS_00038046-exon-sc0001764-1510915933:62038..63162 | TCONS_00038046-exon-sc0001764-1510915933:62038..63162 | Clytia hemisphaerica | exon |
| TCONS_00038046-exon-sc0001764-1491911889:62038..63162 | TCONS_00038046-exon-sc0001764-1491911889:62038..63162 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001764 | supercontig | sc0001764:62038..63162 - |
Blast
The following BLAST results are available for this feature:
|
