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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038033 ID=TCONS_00038033|Name=TCONS_00038033|organism=Clytia hemisphaerica|type=transcript|length=993bp
CTCTGTTGTTGTATGTACTTTGGTTGGTGTCTTTTaactttcaaatcatt
cttctttttctctcaGCAAGTAAGGTCGCTTGAAAGCGGGATTCCGCACC
GGGTTCTAGGCCGACTGTAGCGGGCATATTGTGTCCTCGAAATTATGTGT
CTATATTATATTGGGCACATCAATAATGTTTATAGTTTTTATATTGGGCC
GCTATAGGGGTCATCAACACTGCGTGTGTTTTTCGCATGGGACATGGCTT
GATGTGGTTCCATGTGGCTTGATGTTCCAAAATATTCCAGTATTCTGAGT
gagtaaaaattaaaatgtgGGAAAAATGACTCTGGCACACTGGAAGATCA
CAGTTAATCAGTTTGTCAGTGATCCAAGAATTGACATCGCCCAAGTATAT
TTGATAAACCCAGAACTTTACTTACTATACCTGATGATTGGTGCTGTGAT
GACACTTTCAAGTACTCTCAACACTTACATTTTTGTGATTCATTCATTAT
TTTTATTctcatggaaaaaaaattggtgaGGATATAATTGGATAAATGAA
ATTAATGAGCTGATAACACAAGAAAAAGGAGTTATTGCATTGACTAGAAC
ATTAAACGATGATATAGGTACAACAATGACATTAGGGTGACAGAACCAAG
AAAGCTGTTTTTTTTGCCTAAAGTGTTTGGATTGGAAGCCATAAAAAGTT
TTGCATCAGAGCCAGAGGTACCTATAACATAAAAAACTTATTCTATGGAA
AATAATACATCAATCTATCACCATACAGAGAAGAGAATAGGATTGTTTGA
GATAATATGCATTTCTTTGGTATTGAGACTGTATCATTTCTAAACCAGTG
CACCTTACTGTAAGTGGCATTGATGAGAGTGATGGATGACAGATGAATAA
ACCAGTAAAACCTTCAACATTTCTAGCTGAATCATTGTGTGGTGGTGGTG
GGTAGTGATGAAAAAAGAATGATCCTTTACGAACAAAAAGCNN Run BLAST on NCBI transcript from alignment at sc0001761:39744..40736 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038033 ID=TCONS_00038033|Name=TCONS_00038033|organism=Clytia hemisphaerica|type=transcript|length=993bp|location=Sequence derived from alignment at sc0001761:39744..40736 (Clytia hemisphaerica)
NNGCTTTTTGTTCGTAAAGGATCATTCTTTTTTCATCACTACCCACCACC
ACCACACAATGATTCAGCTAGAAATGTTGAAGGTTTTACTGGTTTATTCA
TCTGTCATCCATCACTCTCATCAATGCCACTTACAGTAAGGTGCACTGGT
TTAGAAATGATACAGTCTCAATACCAAAGAAATGCATATTATCTCAAACA
ATCCTATTCTCTTCTCTGTATGGTGATAGATTGATGTATTATTTTCCATA
GAATAAGTTTTTTATGTTATAGGTACCTCTGGCTCTGATGCAAAACTTTT
TATGGCTTCCAATCCAAACACTTTAGGCAAAAAAAACAGCTTTCTTGGTT
CTGTCACCCTAATGTCATTGTTGTACCTATATCATCGTTTAATGTTCTAG
TCAATGCAATAACTCCTTTTTCTTGTGTTATCAGCTCATTAATTTCATTT
ATCCAATTATATCCtcaccaattttttttccatgagAATAAAAATAATGA
ATGAATCACAAAAATGTAAGTGTTGAGAGTACTTGAAAGTGTCATCACAG
CACCAATCATCAGGTATAGTAAGTAAAGTTCTGGGTTTATCAAATATACT
TGGGCGATGTCAATTCTTGGATCACTGACAAACTGATTAACTGTGATCTT
CCAGTGTGCCAGAGTCATTTTTCCcacattttaatttttactcACTCAGA
ATACTGGAATATTTTGGAACATCAAGCCACATGGAACCACATCAAGCCAT
GTCCCATGCGAAAAACACACGCAGTGTTGATGACCCCTATAGCGGCCCAA
TATAAAAACTATAAACATTATTGATGTGCCCAATATAATATAGACACATA
ATTTCGAGGACACAATATGCCCGCTACAGTCGGCCTAGAACCCGGTGCGG
AATCCCGCTTTCAAGCGACCTTACTTGCtgagagaaaaagaagaatgatt
tgaaagttAAAAGACACCAACCAAAGTACATACAACAACAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038033-exon-sc0001761-1491911889:39744..40736 | TCONS_00038033-exon-sc0001761-1491911889:39744..40736 | Clytia hemisphaerica | exon |
| TCONS_00038033-exon-sc0001761-1510915933:39744..40736 | TCONS_00038033-exon-sc0001761-1510915933:39744..40736 | Clytia hemisphaerica | exon |
| TCONS_00038033-exon-sc0001761-1575043694:39744..40736 | TCONS_00038033-exon-sc0001761-1575043694:39744..40736 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001761 | supercontig | sc0001761:39744..40736 . |
Blast
The following BLAST results are available for this feature:
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