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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038022 ID=TCONS_00038022|Name=TCONS_00038022|organism=Clytia hemisphaerica|type=transcript|length=716bp
GAACAACTCAAAAAACTAACATCCAAAATCGAAAAGAGTATGGTGGATAT
CGAGAAAGTCATTGATGAGAAGGTAACTGCATCCGAGAATAGACTTTTAA
ACATTGTTGAAAACTTAGAGTCACAGATCGATACTCTTAAAAAAAGCCAC
ACTTCACAACTAGCAGAACAACAAGACCGTAGCCTGAGAAACACCCTGAT
CTTCAGAGGTATCAAGTATGATTCAAAGACAGAGAAAACCCCACAACAGA
CAATCAACAATCTTGCAACAGTTATTAATAAGCATTGTCCAGCTATCGGT
GAGGAATTCTTTAAAAGTGCCGTAGAACGAGGACACCGAAACCTCAGTAA
GAATAAACGAAACCAACCGAACGGTTCACCACCATCCATCAGCATCAAAT
TCCTCTCTTGGAAGGACTCAAGTAACATCCTGAATGAACTCATCAAAGTC
AACAGTAACAAATCTGATAAGAAATTTATTAATGTGTCTCAACAATTCTC
TGAACACACCAACGCCAGACGAAACGAAGCTCTGATTCACAGGAAACAAC
TTATCGTAACTAACAAAGACATGGAATATCGATTGGTGTACCCTGCCACT
TtacttgaaagaaaaaagaacagtgatacaaatttcaaaacagtcAAAGC
CTTCTGAACTACTGATTTCTGACTATTCTCTTAAGTGTTTAAACTAAGtg
ttttataaagtttttt Run BLAST on NCBI protein sequence of TCONS_00038022-protein >TCONS_00038022-protein ID=TCONS_00038022-protein|Name=TCONS_00038022-protein|organism=Clytia hemisphaerica|type=polypeptide|length=218bp
EQLKKLTSKIEKSMVDIEKVIDEKVTASENRLLNIVENLESQIDTLKKSH
TSQLAEQQDRSLRNTLIFRGIKYDSKTEKTPQQTINNLATVINKHCPAIG
EEFFKSAVERGHRNLSKNKRNQPNGSPPSISIKFLSWKDSSNILNELIKV
NSNKSDKKFINVSQQFSEHTNARRNEALIHRKQLIVTNKDMEYRLVYPAT
LLERKKNSDTNFKTVKAF Run BLAST on NCBI transcript from alignment at sc0001758:40689..41404 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038022 ID=TCONS_00038022|Name=TCONS_00038022|organism=Clytia hemisphaerica|type=transcript|length=716bp|location=Sequence derived from alignment at sc0001758:40689..41404 (Clytia hemisphaerica)
aaaaaactttataaaacaCTTAGTTTAAACACTTAAGAGAATAGTCAGAA
ATCAGTAGTTCAGAAGGCTTTgactgttttgaaatttgtatcactgttct
tttttctttcaagtaAAGTGGCAGGGTACACCAATCGATATTCCATGTCT
TTGTTAGTTACGATAAGTTGTTTCCTGTGAATCAGAGCTTCGTTTCGTCT
GGCGTTGGTGTGTTCAGAGAATTGTTGAGACACATTAATAAATTTCTTAT
CAGATTTGTTACTGTTGACTTTGATGAGTTCATTCAGGATGTTACTTGAG
TCCTTCCAAGAGAGGAATTTGATGCTGATGGATGGTGGTGAACCGTTCGG
TTGGTTTCGTTTATTCTTACTGAGGTTTCGGTGTCCTCGTTCTACGGCAC
TTTTAAAGAATTCCTCACCGATAGCTGGACAATGCTTATTAATAACTGTT
GCAAGATTGTTGATTGTCTGTTGTGGGGTTTTCTCTGTCTTTGAATCATA
CTTGATACCTCTGAAGATCAGGGTGTTTCTCAGGCTACGGTCTTGTTGTT
CTGCTAGTTGTGAAGTGTGGCTTTTTTTAAGAGTATCGATCTGTGACTCT
AAGTTTTCAACAATGTTTAAAAGTCTATTCTCGGATGCAGTTACCTTCTC
ATCAATGACTTTCTCGATATCCACCATACTCTTTTCGATTTTGGATGTTA
GTTTTTTGAGTTGTTC Coding sequence (CDS) from alignment at sc0001758:40689..41404 >TCONS_00038022 ID=TCONS_00038022|Name=TCONS_00038022|organism=Clytia hemisphaerica|type=CDS|length=657bp|location=Sequence derived from alignment at sc0001758:40689..41404 (Clytia hemisphaerica)
TCAGAAGGCTTTgactgttttgaaatttgtatcactgttcttttttcttt
caagtaAAGTGGCAGGGTACACCAATCGATATTCCATGTCTTTGTTAGTT
ACGATAAGTTGTTTCCTGTGAATCAGAGCTTCGTTTCGTCTGGCGTTGGT
GTGTTCAGAGAATTGTTGAGACACATTAATAAATTTCTTATCAGATTTGT
TACTGTTGACTTTGATGAGTTCATTCAGGATGTTACTTGAGTCCTTCCAA
GAGAGGAATTTGATGCTGATGGATGGTGGTGAACCGTTCGGTTGGTTTCG
TTTATTCTTACTGAGGTTTCGGTGTCCTCGTTCTACGGCACTTTTAAAGA
ATTCCTCACCGATAGCTGGACAATGCTTATTAATAACTGTTGCAAGATTG
TTGATTGTCTGTTGTGGGGTTTTCTCTGTCTTTGAATCATACTTGATACC
TCTGAAGATCAGGGTGTTTCTCAGGCTACGGTCTTGTTGTTCTGCTAGTT
GTGAAGTGTGGCTTTTTTTAAGAGTATCGATCTGTGACTCTAAGTTTTCA
ACAATGTTTAAAAGTCTATTCTCGGATGCAGTTACCTTCTCATCAATGAC
TTTCTCGATATCCACCATACTCTTTTCGATTTTGGATGTTAGTTTTTTGA
GTTGTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038022-exon-sc0001758-1491911889:40689..41404 | TCONS_00038022-exon-sc0001758-1491911889:40689..41404 | Clytia hemisphaerica | exon |
| TCONS_00038022-exon-sc0001758-1510915933:40689..41404 | TCONS_00038022-exon-sc0001758-1510915933:40689..41404 | Clytia hemisphaerica | exon |
| TCONS_00038022-exon-sc0001758-1575043694:40689..41404 | TCONS_00038022-exon-sc0001758-1575043694:40689..41404 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001758 | supercontig | sc0001758:40689..41404 . |
Blast
The following BLAST results are available for this feature:
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