TCONS_00037971 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037971
Unique NameTCONS_00037971
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1359

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037971 ID=TCONS_00037971|Name=TCONS_00037971|organism=Clytia hemisphaerica|type=transcript|length=1359bp
ttttagtgcaaaaaaattaaagtgaacTTTGTTTGCAAgacgaaaaatga
taaattaagCACCGAAGATAATGTAGAAAAAAGCTtctaaaatcaacaaa
acacgAGAAAAGTCAAGCTACCAGAAGActcaaacaaaacaaataacttA
AGGAATAACAATGGCAGAAATCAAAGCAGTACCACTTGGAGCAGGGCAAG
ATGTAGGCCGCAGTTGCATTGTGGTCACATTAGGTGGTAAAAACATTATG
TTGGATTGTGGGATGCATATGGGTTACCAAGACAACAGGAAATTCCCTGA
TTTCACTTACCTGGCGAAAAGTGGACCGTACACACCTTACATAGACTGTC
TTATCATCTCACATTTTCATTTGGATCACTGTGGTGCGCTACCTTATTTT
ACTGAGATGTGTGGTTACGATGGCCCTATCTACATGACGCACCCAACCAA
AGCCATATGTCCAATCCTATTGGAAGACTTCCGTAAGATTCAAGTGGAGC
GGAAAGGCGATTCACATTTTTTCACATCACAGAATATTAAAGATTGCATG
AAAAAAGTTGTACCTGTTAATTTACACCAAGTGGTGCAGGTTGACGACGA
GTTAGAAATCAAAGCATATTATGCTGGTCACGTGATCGGAGCAGCCATGT
TTCATTGTCGCGTTGGCGACCAATCATTTGTTTATACCGGTGATTACAAC
ATGACTCCGGACAGGCATTTAGGAGCCGCTTGGATCGATAAATGTCGACC
GGATCTTTTGATCACAGAGTCTACATATGCCACAACTATACGAGATTCGA
AAAGGTGTCGCGAAATGGATTTCCTAAAAAAAGTTCACGAAACCATTTTG
AAGGGCGGTAAGCACAGAGATCATCAATGAATCGTTTGGTTGAATGAAAA
TGACGAGCCTTCACTTTATTTTGTTCAATCAACTGGTTCATATATCTTAT
ATCTTTGCTCgtattattataaaaataagTTACCCCAAAATGACTCTGAA
TCGATGCCCATGGGGATACCTATGACCTGACACGTGACAACATTGCCagc
tttgtaaaaataatttattatttATCGGAATTTATATCGAATTATTTATT
GCATCGAATTCTTTATCGCATATTTTTATCGCacaatcgaaattttttca
aataatttatcgCATTGAATTGTTTATCGCataatttatcgcatcgaaaT
AGTTTATCGAATAAATCATCACTATCATATATTTTATCGCATAAGGCAGC
TACGGTGTTCCATATAAGCAAATAGCATAAATGGTTGCCAAAGTGATACt
agggcagaaacttttgcgggcagaaactttcacgagaccgaaaagtcgcg
aaatttcgc
Run BLAST on NCBI

protein sequence of TCONS_00037971-protein

>TCONS_00037971-protein ID=TCONS_00037971-protein|Name=TCONS_00037971-protein|organism=Clytia hemisphaerica|type=polypeptide|length=239bp
MAEIKAVPLGAGQDVGRSCIVVTLGGKNIMLDCGMHMGYQDNRKFPDFTY
LAKSGPYTPYIDCLIISHFHLDHCGALPYFTEMCGYDGPIYMTHPTKAIC
PILLEDFRKIQVERKGDSHFFTSQNIKDCMKKVVPVNLHQVVQVDDELEI
KAYYAGHVIGAAMFHCRVGDQSFVYTGDYNMTPDRHLGAAWIDKCRPDLL
ITESTYATTIRDSKRCREMDFLKKVHETILKGGKHRDHQ
Run BLAST on NCBI

transcript from alignment at sc0001748:14712..22955-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037971 ID=TCONS_00037971|Name=TCONS_00037971|organism=Clytia hemisphaerica|type=transcript|length=8244bp|location=Sequence derived from alignment at sc0001748:14712..22955- (Clytia hemisphaerica)
TTTTAGTGCAAAAAAATTAAAGTGAACTTTGTTTGCAAGACGAAAAATGA
TAAATTAAGCACCGAAGATAATGTAGAAAAAAGCTTCTAAAATCAACAAA
ACACGAGAAAAGTCAAGCTACCAGAAGACTCAAACAAAACAAATAACTTA
AGGAATAACAATGGCAGAAATCAAAGCAGTACCACTTGGAGCAGGGCAAG
ATGTAGGCCGCAGTTGCATTGTGGTCACATTAGGTGGTAAAAACATTATG
TTGGATTGTGGGATGCATATGGGTTACCAAGACAACAGGAAATTCCCTGA
TTTCACTTACCTGGCGAAAAGTGGACCGTACACACCTTACATAGACTGTC
TTATCATCTCACATTTTCATTTGGGTAAGTTTCATTCATTAAAAATTCTC
ATATCGTAATAATAGACGATACCGGCTTAACGTGAAAACTCAGATTTGAT
CCCCGAATATTGCCCACAATGCTTTGTGCGGAAAAAAATTCACCGTGAAC
TTTTTTCCGGGCAAAGCATTGTGGGCAATATTCGGGGATCAAATCTGAGT
TTTCACGTTAAGCCGATATCGTCTATTAGAACAAATGCCTCCTTTCTTAC
TCTGTGTATCTTACGTTTATCGCTTCGTAGTACAATCTGTGCACATCGCC
TGTTTGATAAAAAAATCACGTACGGACACTTCTGCGACGAGGTATGATTT
ATAAATAGCAACACTTCTCTCATCGTCTCCCCTCTCTCATCGTCTCCCCT
CTCTCATCGTCTCCCCTCTCTCACCAACACTCCATCGCAGCGGTCGGTTT
GAAAAATTTCAAATGAGAAAAGACAATGACAACAGACCCTCTAGGGCAAT
GAATATTGAAATTAGCCGTAGAATCGGGTTTGTGTACAGACAACCCCTTT
CTTTGACATCGGTATAGAAATTGTCGAATGTTTTCTGAAACCTCCTCTAG
AAACGACATTTCTCATTTCTCCAACAGATCACTGTGGTGCGCTACCTTAT
TTTACTGAGATGTGTGGTTACGATGGCCCTATCTACATGACGCACCCAAC
CAAAGCCATATGTCCAATCCTATTGGAAGACTTCCGTAAGATTCAAGTGG
AGCGGAAAGGCGATTCACATTTTTTCACATCACAGAATATTAAAGATTGC
ATGAAAAAAGTTGTACCTGTTAATTTACACCAAGTGGTGCAGGTTTGTTT
TAATCATTTACTCGAGTGAAGTAGGGGGGGGGGACCCTTAGGACCCGTGA
CATCTTTATACCACTCAACCAAACCTGGTCCATTTCAAAGAATGAAGAGG
GGGTGAGATTTGCTAAAAGGCCTAGGAAAGTTTTTTAGGACTCAAAAACT
GACGTCACAGGCAAAATCCCTTGACCCTTGAAATTTCACGAAATTTCAAA
GTCGCATAAAAGATGTCAGGCAACCTAAGGGTTTGCCCCCCCCCTACTAT
TGATTTCGTTTTTGCCAGAAACAAATACTTGTGGTGATAGGGCCGTTTGA
AAGTAATTTTTGAAACTGTGATGGCTTTTTTGCGAGTACCATTTTCAGAA
ATACTTCGATCAAAGGTGGTGGACATAGCTAAGTCTAATTATGAATGTCA
GTGCATGCAATGTTTTTCCAGATGTCGATTTTGTAGCTTCCCTAGAAAGA
CAGGTTTCTTAAAGTTACAGAAATTTCTCCGGTGGTCAGATGCTTTCCCT
ATGTAATATTCCTTTTTTTGTTGAAAGTACCCTCTCCAAACTTGATATTC
AGTTTATTATTTAGCAAATACAACTTGAATACCAACCTAGTAGGGCTTAG
AAATCTCTCTTAGAACCGTCAAAATCTAATAATTTTGGTTGACCACGCTC
ATATTTACACGATGTAAATTTATGTTTATTTATGATAATTTATGCACACT
AGGTTGACGACGAGTTAGAAATCAAAGCATATTATGCTGGTCACGTGATC
GGAGCAGCCATGTTTCATTGTCGCGTTGGCGACCAATCATTTGTTTATAC
CGGTATGTAGAGTTTTTGAATTTCAAAGTCTTAGTCGGTTCGTTTTTGGC
TTTTAAGTGGGCTTCCTAAAGGCCAATCTCCACTTAAGCGCGAAATGGGC
AACAGTTTTTTTCTTAATCCTTTTTGCCTGAAGAAAAGATTACGTCATAA
AAAAAGTTTCGCGCGAACAAAAAAAAATTGTAGGAAGTTCTACTTTTTTC
ATCCGTTACGTCAATTTCGACCAATGGAATAGCTTCATTTTTCAACCGAC
CAATGACCTTACAAAAACGTCAAAAAGTTTTCGCTCATGCTGCGCGAAAG
TGGAGACCGGCCTTAAGGCACTATCCACCTTCAAGTTTTTTTTCATACCG
CAGAAAGGAATTCTGCATCAAAGATCTTGTTTTTGAATAAGAGTGACACC
GGACTGATACAAGACATGTGAAACGGGAACACTTATTAAAAAATTAAAAC
CTTTAAAATATTTTAATATTTAAGGATGATCGGTATGATTGTTCAGTAAG
GCTAACTTTTAAAGTTTGCCGGAAGAGTTTTATCACTTCTTTTTGTGAAT
TAACCAGAGAAAATTATCTGCTTCAATATATGAAAATAAATACAGTTGAC
GATTTCTAATTCGACATTCTACTAATCGATACGCTCCATTATTCGATAAT
TATTGAAAGTCAAGCCAAAGCCATCAACAAGAAACTCTCATAAACGGCTC
TCCACTATTTGACACGCTCTCTTATACATTTCATTTCTTCAGGTGATTAC
AACATGACTCCGGACAGGCATTTAGGAGCCGCTTGGATCGATAAATGTCG
ACCGGATCTTTTGATCACAGAGTCTACATATGCCACAACTATACGAGATT
CGAAAAGGTGTCGCGAAATGGATTTCCTAAAAAAAGTTCACGAAACCATT
TTGAAGGGCGGTAAGGTAAGAATACATTTTTTTGAGGCGTGTTGAAACCG
TCATGAAAGGCGGTAAGGTAAAAAAAGCATTTTTCGAGGGCGTGCTGAAA
CCATCATGAAGGGCGATAAGGTAAGAAAGATTCTTTTTTTTTGGGGGGGG
CGTGTTGAAACCGTCATTGAGAGCGGTAAAGTAATAAAATAGTAATTTCC
GTGGGGCGTGTTGAAACTGTCATGGAAGGCGGTAAGGTAAGAAAGCATTT
TTTGAGGGCGTGTTGAAACCATCATGGAGGGCAGTAACGTAAAAAAGCAT
TTTTCGAGGGCGTGTTGAAACCATCATGAAGGGCGGTGAAGTGAGAAAGC
ATTTTTTGAGGGTGTGTTGAAACCATCATGAAAGGGCGGTAAAGTAAGAA
AGCTTTTTTGGGGGGCGTGTTGAAACCATCATGAAAGGGTGGTAAGGTAA
TAAAGCAATAATTTCTGTGGGGCGTGTTGAAAACGTCATGGAGGGCGGTA
AGGTAATAAAGCGGTAACTTCTGTAGGGCGTGTTGTATTTCTACCACTCA
AATTTTTTCGAAGAAGAATTTAAAACTTTTTATCCGTCTGTTTGCGTTTA
TTTAAAAAAAAAAAGGCTTTTACATACGCCATTGTTTCTGGAAGTTTTAC
ATTTGACCTTCGAATTTCTGTGAAATTTCAGTAAAAAAATTATATCATTG
CCTAGAAGGTTAGTGGTACGGGTAGACCCCGTACGCGTTTTTTTTGTAAG
AACAAACTACATAAGAACATAAGAGCATTAAAAACAGGTTAAAAACTCGA
TGTTAAGAACATTTCAAGAAATTATTTTAGGCTTAATACTCAAAAGGTTA
AGAGATGAAAGGCCCCCAGCGGTTTGCGTGAATGCGTGAATTGGAAAGCT
TTGCGTGAACAAAAATTGCGTGAACAAAAATTGCGTGAGTTGCGAAAAAA
CATTGCGTGGGTGCGTGAATTTGGGAAAAACATTTGCGTGATTGCGTGAA
TTTAAGGCCCGCTGGGGGACCTCGTAAAAGACTTGGATGTTCTTATAAAA
AGGTGTACCTCAGGATTGACTTGTACTTCAATTATGTTTAATTATATTAA
AGGGGACTTCGTGCAAAGAGTTAATGTAAAATTTTAATCAAAAATGGGAA
AGACCCTAATTCATGATATGCACCATTGCAATGTCTTCTACAGACCCAAC
AGCTGATTGGTTGAAAGTGATGTATCGACTGATTTTACGTCGCTTACAAC
CAATCAGCTATTGGGTCCATGATGTAATGTCAGNTTGAAAGTGATGTATT
GACTGATTTTACGTCGCTTACAACCAATCAGCTATTGGGTCCATGATGTA
ATGTCAGAAGACATTGCAATTGTGCATATCATGAATATTTTACCGCTATT
TTCTGGTGTGCTGGTCTTTTGCGGTATTTGACCGAATCATTCTCTGCGGG
AAATTCGTTAATATTTAAGAGCTATTCAATCTCTCAACAACGGGGAAAGT
CCCTAACTTTTCATAAGGAATTTCCGAGTGAATTTCACCTGGTGAATTCA
CGATTATTCAAAGGATTGCAAATTTCCTTTAGCCAAATTTATATTTTGTT
GATGTCATTCTGTCAAGTAAATGGTATTCATGATATGTATGACGTAATGT
TTTATACGGAAGCATAAAAAAAGAACGGGTGTTTGCTAACAATTCTGACT
TAAAAGTCTTTGTTTTTAAATAAGAGTGACATCGTTTGCTCACTCGTCAA
TTTTAATTTACAAGCTTTTTGAATTTTATTGAATTTTGACACGGATGAAT
ATTATGAAATTAAATTATTGTGTTGTTGATTTTAATATATTATTTATAAA
AGACAATTGAATTCGGAGAAATTCACACTGTTTGTTTGGTATCCATGGCA
ACCATTTAGAGATTGTATACGATCACCAGTATGGTACGGTAGATAATTTT
TTGTTTGTTACGTATATTTCCCTTTTTACAGTATTAAATACCCTAAAAAA
ATTATATATTTTCTCACTCTAAAATTTAGATTTTTTTGTGCTGAACTATT
ACTCCAATTACGATTTCTGAAGGTAATTATTTTTATTTCATTTTTATTTC
CGTTACTTTTAAGGTTGAGTTAAAGGTTTTGTTTTGATTGAAAGGTCCGA
CGATGCTGATGTAGTAAAAACAAATGCGACAAGAATAGAAAAAGGTTTTT
GAAAAAAATGATAATACATTGAATAAAAAAATATTCGATCATTCAAGTCG
ATATCGTTGCGTAAAAATATAGCTTTAATTTATCTGACTCAGCATGAAGA
CACTGCCTAAAATAAGCTCCTTTTATTCTCGTAGAAAACCTTTAAAGATT
AGATGACATCACTTCAGAAAATTGTCACCATTTGTGAAACTTCAAGTTAA
TACGTGACGTTTCGGAAAACTACAATCTTGCCGAAAAGCTGATCAAGAGT
AGAATTTTGAATTTCTGAAAGTTGTTACGAAGTTATTTTTCATTATAATA
TCATCAGTTAATAATTATTTGCCAGTTTTCTTTCTATGTTTTTAAAACTC
AATCGTTTTGTTTCCTTTAGAAATGGCTGAACTATCAGAGTTTCATTGTT
GTCATTTTACTTGGCAAATCCCGAATCAAAGCTTACGAAGAAATCGATTC
TTACGGGACCGAATTTACACCATCGAAGAAGAAGTCAAGTCTCAAAACGA
AGGAAAATCAAAGAAACGAAACTATCCACAACTTTTATCGCTTCAAGCCT
TCCTCAACGTCATGTTGTATCGCAACAAAAACGAAGATGAAGATGAAAAT
GAAGATCGTTTATTGGAAAATGCTGAATCCTGTCTCAATCAAGCTTTGAA
AGAATGTAATTCAATTTCGAAAGAAGACGAAGACGAAGCCAATGGCTATC
GATTGGTCATCTATGCTGACTTTATTCATTTGCATCAATATCAACCAAAC
GAGAATGTCGAAGATTATAAGGAGGCTTACAATGATTTGATAAGTCAGGG
TTTGTCAGGCGATGAACATCCGTCAGTGTNGAGGCTTACAATGATTTGAT
AAGTCATGGTTTGTCAGTCGATGAACATCCGTCAGTGTTGGCCATGAAAG
GTTTCACTGCCGGTCATTTAGATTTTCTTCAAGATGCAATAATGTGGTAT
CAGAGAGCCTTGGAAACCATGGAAAAAGCTGAATGGTTATTTGGCTTAGC
TCTGGCAAAATTGCAATTGGACTATTGGCGATCAAAACCAACCAATAATG
TGGGGATTCAAAATCTTTTACAACAAGCCATCAAATTGGATCCAACATAT
GATATGGCGAGAATCAAACTGGCCAGATGTTTGTTGGATCAGCATAAAAA
AAGTAACCAGAACGGGGCTCATCTCCCTCAGATGCTGGTAATGCAGATCA
AGGATCTTGTGGATCCAATACAAACCAGTAATGACCATAATGGAATTGGG
TTAAATATTTTGGAAGAAATTGGATCTGTATATAGTAGGATGGACAACTT
TCTTGATAAGGGATTACGACTTTCCAAAGAATGCCGAAGACGGAATCCTG
AATCAATGAAAGCTTTACGTTGCCTTGCAAATGCCTACTTTCACAAGTGG
AAAAGCTCGAGAAATGAATCTGAATTGAAGAATTCGGTAAAGTATTTTAG
CCAAATTATTTCTGACCTGGAAAATTCGAAAATGTATGACATCACAATGT
TGGGTGTGGTTCATTTGAATGCATCTAACTTCTATTTGGAGAAAGATGGA
GTAAAAGCTCAACATCACAAAGCCGAATGGAAAATTTGTTTCGAGAAAGT
AGAAGAACTTTTTCACCAAGGCCAACTGGAAGTTAAAGAAGAAATCGAGA
TGTGTCACCGTTTGGCATGGTTCTATAGTGACTTACGAAAACCTTTGAAA
GAAAGGGAATATTGGCAGAAGGTTTTGGATATCAATGACAAAGCGCTAAG
AGAAGGCATTCGAGATTTTCAAGAATCATCATATGTAAAAAATGCTCAAG
AAAAACTGTCAGAATTCCAATAAGAATGAATGAATTTTATATAAATTGTC
AACCCCAAAATTTTGACAAAATGACACTTAAATTATGTAAATCACGATAA
TAAGCAGATATTCAATAGGTAAAAGTTGGTTATTTAGATTTATTAACCCT
CGGTGATGTAATATTACCATGAATATACATCACCGTGGGTTAATAAATCC
AATAACCAACCAAAACTTATTGAATATATGTTTTATTATATACCTAAAGG
CAAAAACAAAACATTAATTATGTCGAACGTTAAAACTTAAAACACTCCCA
TAATCGAACGTTCGAATTTTTTTATTAATGATTTTCTTGATTACTTTAAG
TCATGAAATTCGTTCATGAAATCGACAATAGATTTATTTTAATGAATTTC
TTTGATGAACAACAAGAGCGACAAAAAATCAAACTTTGAAAGCAAAATTT
GAAAAAAATTCTACCGTGGTATAATAGCCGTGGTATATCAGGAATTATTC
AATGACTGTTTTTGCCTACAGGTATATAATAATATCAAAAATATGACGAA
CTACAGCAATATGAGGGGTTTCCATCGCTACAGAAGTCTAACAAGAGTTT
CAAACCAGGCTCTAGATTTGTATTTTTCCTATTCCGGTGACATTAGCGGA
CCTTAAATGATGGCCAAAATATTTTTGAATATCAAAGCTCTTAGAGAAAG
CACTTGGGATACCAACCATAGAAGGCAAGTCATTGATGGAAATGTCAAGG
TTAAGAAACGAAGCATGAGATTCCGAGTGTTCAACTTTGTGGTCAAGTTC
ATCTAAATAGATCTTATGTACAAATTCAATGTTCCCATTATTTACAGCAC
AGAGATCATCAATGAATCGTTTGGTTGAATGAAAATGACGAGCCTTCACT
TTATTTTGTTCAATCAACTGGTTCATATATCTTATATCTTTGCTCGTATT
ATTATAAAAATAAGTTACCCCAAAATGACTCTGAATCGATGCCCATGGGG
ATACCTATGACCTGACACGTGACAACATTGCCAGCTTTGTAAAAATAATT
TATTATTTATCGGAATTTATATCGAATTATTTATTGCATCGAATTCTTTA
TCGCATATTTTTATCGCACAATCGAAATTTTTTCAAATAATTTATCGCAT
TGAATTGTTTATCGCATAATTTATCGCATCGAAATAGTTTATCGAATAAA
TCATCACTATCATATATTTTATCGCATAAGGCAGCTACGGTGTTCCATAT
AAGCAAATAGCATAAATGGTTGCCAAAGTGATACTAGGGCAGAAACTTTT
GCGGGCAGAAACTTTCACGAGACCGAAAAGTCGCGAAATTTCGC

Coding sequence (CDS) from alignment at sc0001748:14712..22955-

>TCONS_00037971 ID=TCONS_00037971|Name=TCONS_00037971|organism=Clytia hemisphaerica|type=CDS|length=3600bp|location=Sequence derived from alignment at sc0001748:14712..22955- (Clytia hemisphaerica)
CACAGAGATCATCAATGAGTGATTACAACATGACTCCGGACAGGCATTTA
GGAGCCGCTTGGATCGATAAATGTCGACCGGATCTTTTGATCACAGAGTC
TACATATGCCACAACTATACGAGATTCGAAAAGGTGTCGCGAAATGGATT
TCCTAAAAAAAGTTCACGAAACCATTTTGAAGGGCGGTAAGGTTGACGAC
GAGTTAGAAATCAAAGCATATTATGCTGGTCACGTGATCGGAGCAGCCAT
GTTTCATTGTCGCGTTGGCGACCAATCATTTGTTTATACCGATCACTGTG
GTGCGCTACCTTATTTTACTGAGATGTGTGGTTACGATGGCCCTATCTAC
ATGACGCACCCAACCAAAGCCATATGTCCAATCCTATTGGAAGACTTCCG
TAAGATTCAAGTGGAGCGGAAAGGCGATTCACATTTTTTCACATCACAGA
ATATTAAAGATTGCATGAAAAAAGTTGTACCTGTTAATTTACACCAAGTG
GTGCAGATGGCAGAAATCAAAGCAGTACCACTTGGAGCAGGGCAAGATGT
AGGCCGCAGTTGCATTGTGGTCACATTAGGTGGTAAAAACATTATGTTGG
ATTGTGGGATGCATATGGGTTACCAAGACAACAGGAAATTCCCTGATTTC
ACTTACCTGGCGAAAAGTGGACCGTACACACCTTACATAGACTGTCTTAT
CATCTCACATTTTCATTTGGCACAGAGATCATCAATGAGTGATTACAACA
TGACTCCGGACAGGCATTTAGGAGCCGCTTGGATCGATAAATGTCGACCG
GATCTTTTGATCACAGAGTCTACATATGCCACAACTATACGAGATTCGAA
AAGGTGTCGCGAAATGGATTTCCTAAAAAAAGTTCACGAAACCATTTTGA
AGGGCGGTAAGGTTGACGACGAGTTAGAAATCAAAGCATATTATGCTGGT
CACGTGATCGGAGCAGCCATGTTTCATTGTCGCGTTGGCGACCAATCATT
TGTTTATACCGATCACTGTGGTGCGCTACCTTATTTTACTGAGATGTGTG
GTTACGATGGCCCTATCTACATGACGCACCCAACCAAAGCCATATGTCCA
ATCCTATTGGAAGACTTCCGTAAGATTCAAGTGGAGCGGAAAGGCGATTC
ACATTTTTTCACATCACAGAATATTAAAGATTGCATGAAAAAAGTTGTAC
CTGTTAATTTACACCAAGTGGTGCAGATGGCAGAAATCAAAGCAGTACCA
CTTGGAGCAGGGCAAGATGTAGGCCGCAGTTGCATTGTGGTCACATTAGG
TGGTAAAAACATTATGTTGGATTGTGGGATGCATATGGGTTACCAAGACA
ACAGGAAATTCCCTGATTTCACTTACCTGGCGAAAAGTGGACCGTACACA
CCTTACATAGACTGTCTTATCATCTCACATTTTCATTTGGCACAGAGATC
ATCAATGAGTGATTACAACATGACTCCGGACAGGCATTTAGGAGCCGCTT
GGATCGATAAATGTCGACCGGATCTTTTGATCACAGAGTCTACATATGCC
ACAACTATACGAGATTCGAAAAGGTGTCGCGAAATGGATTTCCTAAAAAA
AGTTCACGAAACCATTTTGAAGGGCGGTAAGGTTGACGACGAGTTAGAAA
TCAAAGCATATTATGCTGGTCACGTGATCGGAGCAGCCATGTTTCATTGT
CGCGTTGGCGACCAATCATTTGTTTATACCGATCACTGTGGTGCGCTACC
TTATTTTACTGAGATGTGTGGTTACGATGGCCCTATCTACATGACGCACC
CAACCAAAGCCATATGTCCAATCCTATTGGAAGACTTCCGTAAGATTCAA
GTGGAGCGGAAAGGCGATTCACATTTTTTCACATCACAGAATATTAAAGA
TTGCATGAAAAAAGTTGTACCTGTTAATTTACACCAAGTGGTGCAGATGG
CAGAAATCAAAGCAGTACCACTTGGAGCAGGGCAAGATGTAGGCCGCAGT
TGCATTGTGGTCACATTAGGTGGTAAAAACATTATGTTGGATTGTGGGAT
GCATATGGGTTACCAAGACAACAGGAAATTCCCTGATTTCACTTACCTGG
CGAAAAGTGGACCGTACACACCTTACATAGACTGTCTTATCATCTCACAT
TTTCATTTGGCACAGAGATCATCAATGAGTGATTACAACATGACTCCGGA
CAGGCATTTAGGAGCCGCTTGGATCGATAAATGTCGACCGGATCTTTTGA
TCACAGAGTCTACATATGCCACAACTATACGAGATTCGAAAAGGTGTCGC
GAAATGGATTTCCTAAAAAAAGTTCACGAAACCATTTTGAAGGGCGGTAA
GGTTGACGACGAGTTAGAAATCAAAGCATATTATGCTGGTCACGTGATCG
GAGCAGCCATGTTTCATTGTCGCGTTGGCGACCAATCATTTGTTTATACC
GATCACTGTGGTGCGCTACCTTATTTTACTGAGATGTGTGGTTACGATGG
CCCTATCTACATGACGCACCCAACCAAAGCCATATGTCCAATCCTATTGG
AAGACTTCCGTAAGATTCAAGTGGAGCGGAAAGGCGATTCACATTTTTTC
ACATCACAGAATATTAAAGATTGCATGAAAAAAGTTGTACCTGTTAATTT
ACACCAAGTGGTGCAGATGGCAGAAATCAAAGCAGTACCACTTGGAGCAG
GGCAAGATGTAGGCCGCAGTTGCATTGTGGTCACATTAGGTGGTAAAAAC
ATTATGTTGGATTGTGGGATGCATATGGGTTACCAAGACAACAGGAAATT
CCCTGATTTCACTTACCTGGCGAAAAGTGGACCGTACACACCTTACATAG
ACTGTCTTATCATCTCACATTTTCATTTGGCACAGAGATCATCAATGAGT
GATTACAACATGACTCCGGACAGGCATTTAGGAGCCGCTTGGATCGATAA
ATGTCGACCGGATCTTTTGATCACAGAGTCTACATATGCCACAACTATAC
GAGATTCGAAAAGGTGTCGCGAAATGGATTTCCTAAAAAAAGTTCACGAA
ACCATTTTGAAGGGCGGTAAGGTTGACGACGAGTTAGAAATCAAAGCATA
TTATGCTGGTCACGTGATCGGAGCAGCCATGTTTCATTGTCGCGTTGGCG
ACCAATCATTTGTTTATACCGATCACTGTGGTGCGCTACCTTATTTTACT
GAGATGTGTGGTTACGATGGCCCTATCTACATGACGCACCCAACCAAAGC
CATATGTCCAATCCTATTGGAAGACTTCCGTAAGATTCAAGTGGAGCGGA
AAGGCGATTCACATTTTTTCACATCACAGAATATTAAAGATTGCATGAAA
AAAGTTGTACCTGTTAATTTACACCAAGTGGTGCAGATGGCAGAAATCAA
AGCAGTACCACTTGGAGCAGGGCAAGATGTAGGCCGCAGTTGCATTGTGG
TCACATTAGGTGGTAAAAACATTATGTTGGATTGTGGGATGCATATGGGT
TACCAAGACAACAGGAAATTCCCTGATTTCACTTACCTGGCGAAAAGTGG
ACCGTACACACCTTACATAGACTGTCTTATCATCTCACATTTTCATTTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022655XLOC_022655Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037971-exon-sc0001748-1575043694:22582..22955TCONS_00037971-exon-sc0001748-1575043694:22582..22955Clytia hemisphaericaexon
TCONS_00037971-exon-sc0001748-1575043694:21764..21978TCONS_00037971-exon-sc0001748-1575043694:21764..21978Clytia hemisphaericaexon
TCONS_00037971-exon-sc0001748-1575043694:20954..21053TCONS_00037971-exon-sc0001748-1575043694:20954..21053Clytia hemisphaericaexon
TCONS_00037971-exon-sc0001748-1575043694:20041..20213TCONS_00037971-exon-sc0001748-1575043694:20041..20213Clytia hemisphaericaexon
TCONS_00037971-exon-sc0001748-1575043694:14712..15208TCONS_00037971-exon-sc0001748-1575043694:14712..15208Clytia hemisphaericaexon
TCONS_00037971-exon-sc0001748-1510915933:22582..22955TCONS_00037971-exon-sc0001748-1510915933:22582..22955Clytia hemisphaericaexon
TCONS_00037971-exon-sc0001748-1510915933:21764..21978TCONS_00037971-exon-sc0001748-1510915933:21764..21978Clytia hemisphaericaexon
TCONS_00037971-exon-sc0001748-1510915933:20954..21053TCONS_00037971-exon-sc0001748-1510915933:20954..21053Clytia hemisphaericaexon
TCONS_00037971-exon-sc0001748-1510915933:20041..20213TCONS_00037971-exon-sc0001748-1510915933:20041..20213Clytia hemisphaericaexon
TCONS_00037971-exon-sc0001748-1510915933:14712..15208TCONS_00037971-exon-sc0001748-1510915933:14712..15208Clytia hemisphaericaexon
TCONS_00037971-exon-sc0001748-1491911889:22582..22955TCONS_00037971-exon-sc0001748-1491911889:22582..22955Clytia hemisphaericaexon
TCONS_00037971-exon-sc0001748-1491911889:21764..21978TCONS_00037971-exon-sc0001748-1491911889:21764..21978Clytia hemisphaericaexon
TCONS_00037971-exon-sc0001748-1491911889:20954..21053TCONS_00037971-exon-sc0001748-1491911889:20954..21053Clytia hemisphaericaexon
TCONS_00037971-exon-sc0001748-1491911889:20041..20213TCONS_00037971-exon-sc0001748-1491911889:20041..20213Clytia hemisphaericaexon
TCONS_00037971-exon-sc0001748-1491911889:14712..15208TCONS_00037971-exon-sc0001748-1491911889:14712..15208Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037971-proteinTCONS_00037971-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001748supercontigsc0001748:14712..22955 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.42384	8.50377	4.05403	2.91952	0	0.309075	0	0	4.02551	5.01588	3.82938	4.26892	2.08788	1.79145	2.65333	2.67205	2.89168	3.09017	2.84372	2.23784	2.6925	2.52059	6.68831	5.9151	0	0.120662	1.46954	1.68755	4.83606	4.2904
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001279Metallo-B-lactamas
Blast
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BLAST of TCONS_00037971 vs. Swiss-Prot (Human)
Match: INT11 (Integrator complex subunit 11 OS=Homo sapiens GN=INTS11 PE=1 SV=2)

HSP 1 Score: 392.119 bits (1006), Expect = 7.542e-130
Identity = 184/234 (78.63%), Postives = 214/234 (91.45%), Query Frame = 2 
Query:  161 MAEIKAVPLGAGQDVGRSCIVVTLGGKNIMLDCGMHMGYQDNRKFPDFTYLAKSGPYTPYIDCLIISHFHLDHCGALPYFTEMCGYDGPIYMTHPTKAICPILLEDFRKIQVERKGDSHFFTSQNIKDCMKKXXXXXXXXXXXXDDELEIKAYYAGHVIGAAMFHCRVGDQSFVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCREMDFLKKVHETILKGGK 862
            M EI+  PLGAGQDVGRSCI+V++ GKN+MLDCGMHMG+ D+R+FPDF+Y+ ++G  T ++DC+IISHFHLDHCGALPYF+EM GYDGPIYMTHPT+AICPILLED+RKI V++KG+++FFTSQ IKDCMKKVV V+LHQ VQVDDELEIKAYYAGHV+GAAMF  +VG +S VYTGDYNMTPDRHLGAAWIDKCRP+LLITESTYATTIRDSKRCRE DFLKKVHET+ +GGK
Sbjct:    1 MPEIRVTPLGAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHETVERGGK 234
The following BLAST results are available for this feature:
BLAST of TCONS_00037971 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
INT117.542e-13078.63Integrator complex subunit 11 OS=Homo sapiens GN=I... [more]
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