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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037931 ID=TCONS_00037931|Name=TCONS_00037931|organism=Clytia hemisphaerica|type=transcript|length=1405bp
CGAAAAGGGAGCTAAAATTTATTCATAATGAGATGCGATGAATGGGCAGT
CTTAATAGTACTAGCATTCTGTTGTCTTGTCTCCTTGTCATTATTGGGAA
CTGATATCTATATATTTTACCGGTACCCAGCAGAAAATGGAATGGTACAT
GGCACATTGGTGGTATTTCTCTGCTTAAACCTTTGTTTAAGATATGTCTT
TCAAACAGTATACACAGACAAGAAAAAATACAACCACCTTATACTCAATA
TAGAACTGTCGGCAAGTCTCTTGGCAGCAATCTTGATAGAAGAATCACTT
ATTCGCATTATTTTCATATCATGGAGTGTGTTCACAACAATTTATATATT
CGTTCTCATAATAACGAAAGTATTCCACCAATATTGGTATGGCAAAGAGA
ACTTCTCTATTCAAAAACAAACTCTATCAGAATTTATTGACGAACAAATG
AATACTGATCCACAAATCACAATTCGTTGTAAAGCTTTTCGACCAAAAtc
gatttggaaattttggcaatcTAAAGAAGTAATTGGTAACGATGCTAAAA
TATTTGTCGACTACGAAAATTGTATTGATTTGACTGATCAAAGCTCTATT
GAAGGTTACAAAAAAACATGGCAAGTAATTATagactttaaaattgattt
tgaagagCAAATAGAGACACTATATTTTCGAACGAGCCAACAATTCATTG
ATGATTTCCGAAAGAGCTTACTGCAGGAGTACCAAGAAGACTCTGAGATT
ACAGTCAAATACGATATCAGTTTCAGCAGACAAAATAAGACCgtaatttg
tttaaaaaatgaatcTTTGGAAATGTTTCTCTGGATTTTAGGTATTCCAG
GACTTATGTTGGAAGGTTTGCTATTGTTTGATGAGAAATGTGGAAGTTGT
TATTTTACCAAACGAATCActattcaaaagaaaatatcatGATGGAAAAT
TtcgtttgaaaaatgtttcttttaaaTACAAGCTGTTTCAATCGATATCA
TTAGAGAAATAAGAGTACAAATGACTCTCTAATTAGAACTACTAATAGAA
ATTCTAACTACTAAGAATTTTCTTCGGAtgagagaaagattcgaattaca
gaaattatTTTATACTTATTTCTACCTAAGAAGACAAATagtttagttcg
aattatagttGAGGGTTGACTGTATATGAGTATTAAATTTCTCAATACAT
AAAGAGCAGTATCCAGTTGGCCCCTTTTTGATCCTCAAGAGTTGTATCAA
TAATAATTAAAGCATcgtaaaacatttaaaaattaaaattgggAGGGTTA
ACCATTTACCCTGGGGTACCCAAGTACTTCTCACTTTGCAAAAAGGGTAC
CCAAGTACCCCTGACTTTGCAAATGGGGTACAAGGATGTACAGTAAACCT
TTTTT Run BLAST on NCBI protein sequence of TCONS_00037931-protein >TCONS_00037931-protein ID=TCONS_00037931-protein|Name=TCONS_00037931-protein|organism=Clytia hemisphaerica|type=polypeptide|length=304bp
MRCDEWAVLIVLAFCCLVSLSLLGTDIYIFYRYPAENGMVHGTLVVFLCL
NLCLRYVFQTVYTDKKKYNHLILNIELSASLLAAILIEESLIRIIFISWS
VFTTIYIFVLIITKVFHQYWYGKENFSIQKQTLSEFIDEQMNTDPQITIR
CKAFRPKSIWKFWQSKEVIGNDAKIFVDYENCIDLTDQSSIEGYKKTWQV
IIDFKIDFEEQIETLYFRTSQQFIDDFRKSLLQEYQEDSEITVKYDISFS
RQNKTVICLKNESLEMFLWILGIPGLMLEGLLLFDEKCGSCYFTKRITIQ
KKIS Run BLAST on NCBI transcript from alignment at sc0001738:11345..15136- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037931 ID=TCONS_00037931|Name=TCONS_00037931|organism=Clytia hemisphaerica|type=transcript|length=3792bp|location=Sequence derived from alignment at sc0001738:11345..15136- (Clytia hemisphaerica)
CGAAAAGGGAGCTAAAATTTATTCATGTGAGTGCTTCAAATTTCGTATTT
CTGGAAAAGTTCAGCAGGTCTACAATGGTCAGGGTTACAATGGTCATTGA
GATCATAGCACGCTAGACGCATAAGTAAAACAAGCGACAAATTGTAGTTT
ATACAAACTGATATCATCCCGTAACAATTATTGTATTTTTATACATGGAT
TACAAACGACTCCAGGCTAAGTTCATTGAGTTTAAAGAATAATATTCAAC
CTTTCTCAAGCAAAATAGTGAAGCTAGGATACCCAGGGTAGGGATATCAT
CAAGTTAAATTGAAGGATTGATGAAGAAAAAAATTCAATTATCCAATCTA
GCTTTTTAATGAAAACTGCGCGGGCGGCGCAACTTATGTTATAATTACGT
GGCTTAAAATCCTGGGACAAGCTGGAGTTTTTACAAGCTCTTATTTGATT
TGGTTGGTCGTTAAGATGTGATAAAAGAATCTTATTACTTTTTCTAAAGA
ACGCGTCATTTCTATCACTTTAAATGACCAATTAGTGAAGTATCTTGTAA
AAACTCCAGCTCATCCCAAAATCCTACGTACACCCCTTCTCACAGATTCG
GTAGGGGGGGTAAAAATAGCAGACTGAAACTCGATGGATTTGTTACTCCC
ATGTTTTTTTATGGCTGGGGATTTGAATTCCATTGTTTCAAGTCAGGAGA
TTCAGTGGGGATGAGAAAAATAGCATAATAATTTGCAGTGAGGATTGGTT
TGTATGATTCTTTTCAATGGGGACAAAAATTGGAGGATGATTTTCAACTG
GGGACGATATTTTGGACAATTTTTCCAGTTGGAAGGGTTCCCAGTGTGTC
TGTGAGAAAGGGGTGTGAAAACCAAACGGGTCTCGCAACTTATGTTGTAA
TTACTCTCGGGTACCTAATAAGTAAGTAAGTTTGCGACCGCAGTCGAGTG
CGACCCGAAGGCTCCCTTTTCGTTCGGCTGTCTACCCGAAGGTAGGGGAG
GGCGCCACTCCTTTCCCTGGAATTCTCCACTTACCCTTGATCCGTCTCTT
TACTTACTGAGCATCAAGCAGAGAGGCATCAAGTACCATTTTGGGAATCT
TTGGTGTGACCCGGCTAAGGATCGAACCCACAACCNCTCGCAGAAGAGTT
AGTGCATCTTTGTAGATCTGTGAGTCTGGATCGTTGTATTGACAGGCGTT
ATTAAAAAGTAGTAACATATCTTGTTCAAAGTCTTCTAAGGATGGGTACT
GAAATGAGAAAATTAATTCATATCAGAGTTAAGGGTTATGTGTTTTTGTA
TCAAAGTCTTTCAACATCAACAATACATTTGCCATATCTATTGAGTTTCA
AGATGAGGGCTAGAGGGAAATTTTTGTCCTTTTCCAGACAAGCAAAAGTG
AAGCTTTTAAAATATTCACCACATTTTGGATGACAGATTAAAATGAGTTT
TTAAGTGACACATTTTCAAAAATCTGTAGCAATTATAATTGGCTTTAAAT
CCTACATAAGAGATTCTTCTGCAGGGTTCAGCTCCCACACAACGTTTTTC
CGACGTTTATCTAATGTTCACAACGTCCAAATAACGTTAAATGAACGCTG
AAATAATGTTATGTGTCGATTGGGCTATATCCCAATGATCTAATCTAAAT
ACGATGTCTCACTCTCAATGTGATACATACACTATACTCAAATGGGATAA
ATTTTAGCGAGGGTTAAAGCGGGGATTACTCTCGGGTACCTATTAGCCAT
CCCCCGACTAATTAATTTTTCAAAAATTTTCCACCCGCAGGACATTTTTA
TTACAACCCCCTTGCTTTGTTTGTTTTGAGAATTTTTCTAAATCCCTCCT
CCTCCACTTATTCCAGCCCCCCTTCTGGCTATTAGGTACCCGAGAGTAAG
TCCCTGTGAAATATTAATTTAATTCCAGCGAAAATTCAACACATTAAAAT
ATATTGGTCATTGTTCTTAGTATTTAATATTCCTTTGTAATGTGTTTAAT
TCATTTTTATTTTTGCTATATTAGAATGAGATGCGATGAATGGGCAGTCT
TAATAGTACTAGCATTCTGTTGTCTTGTCTCCTTGTCATTATTGGGAACT
GATATCTATATATTTTACCGGTACCCAGCAGAAAATGGAATGGTACATGG
GACATTTNTGATATCTATATATTTTACCGGTACCCAGCAGAAAATGGAAT
GGTACATGGCACATTGGTGGTATTTCTCTGCTTAAACCTTTGTTTAAGAT
ATGTCTTTCAAACAGTATACACAGACAAGAAAAAATACAACCACCTTATA
CTCAATATAGGTAAAGTATAATCTGCATTGAAACTTCAACAAAAGGAGAT
CTTTTTTGTAAAAACTAGCAATTCCTCGAGGGAATTCTATTGTAATACAC
CCGAAACAATCCCACAATGCATCGCTTTTTTAGAAAAATCAAAAAGTCCG
ATAATAAGATCCAAATTAAATCTCTTCTGAAAGAACTTTTGCGTCTATTT
AATCTGGTGGATGAAGGACATTTTTGCGACCAAATCCGCCAAGTCCGCAA
AATTTTCTTACCGCGGTACTTTCAGAGCGAACAGATCGTGATAACATGAA
GCTTAATAATTTGACCATTTCTTATTTTTCTTTCTTCTAGAACTGTCGGC
AAGTCTCTTGGCAGCAATCTTGATAGAAGAATCACTTATTCGCATTATTT
TCATATCATGGAGTGTGTTCACAACAATTTATATATTCGTTCTCATAATA
ACGAAAGTATTCCACCAATATTGGTATGGCAAAGAGAACTTCTCTATTCA
AAAACAAACTCTATCAGAATTTATTGACGAACAAATGAATACTGATCCAC
AAATCACAATTCGTTGTAAAGCTTTTCGACCAAAATCGATTTGGAAATTT
TGGCAATCTAAAGAAGTAATTGGTAACGATGCTAAAATATTTGTCGACTA
CGAAAATTGTATTGATTTGACTGATCAAAGCTCTATTGAAGGTTACAAAA
AAACATGGCAAGTAATTATAGACTTTAAAATTGATTTTGAAGAGCAAATA
GAGACACTATATTTTCGAACGAGCCAACAATTCATTGATGATTTCCGAAA
GAGCTTACTGCAGGAGTACCAAGAAGACTCTGAGATTACAGTCAAATACG
ATATCAGTTTCAGCAGACAAAATAAGACCGTAATTTGTTTAAAAAATGAA
TCTTTGGAAATGTTTCTCTGGATTTTAGGTATTCCAGGACTTATGTTGGA
AGGTTTGCTATTGTTTGATGAGAAATGTGGAAGTTGTTATTTTACCAAAC
GAATCACTATTCAAAAGAAAATATCATGATGGAAAATTTCGTTTGAAAAA
TGTTTCTTTTAAATACAAGCTGTTTCAATCGATATCATTAGAGAAATAAG
AGTACAAATGACTCTCTAATTAGAACTACTAATAGAAATTCTAACTACTA
AGAATTTTCTTCGGATGAGAGAAAGATTCGAATTACAGAAATTATTTTAT
ACTTATTTCTACCTAAGAAGACAAATAGTTTAGTTCGAATTATAGTTGAG
GGTTGACTGTATATGAGTATTAAATTTCTCAATACATAAAGAGCAGTATC
CAGTTGGCCCCTTTTTGATCCTCAAGAGTTGTATCAATAATAATTAAAGC
ATCGTAAAACATTTAAAAATTAAAATTGGGAGGGTTAACCATTTACCCTG
GGGTACCCAAGTACTTCTCACTTTGCAAAAAGGGTACCCAAGTACCCCTG
ACTTTGCAAATGGGGTACAAGGATGTACAGTAAACCTTTTTT Coding sequence (CDS) from alignment at sc0001738:11345..15136- >TCONS_00037931 ID=TCONS_00037931|Name=TCONS_00037931|organism=Clytia hemisphaerica|type=CDS|length=2745bp|location=Sequence derived from alignment at sc0001738:11345..15136- (Clytia hemisphaerica)
AACTGTCGGCAAGTCTCTTGGCAGCAATCTTGATAGAAGAATCACTTATT
CGCATTATTTTCATATCATGGAGTGTGTTCACAACAATTTATATATTCGT
TCTCATAATAACGAAAGTATTCCACCAATATTGGTATGGCAAAGAGAACT
TCTCTATTCAAAAACAAACTCTATCAGAATTTATTGACGAACAAATGAAT
ACTGATCCACAAATCACAATTCGTTGTAAAGCTTTTCGACCAAAATCGAT
TTGGAAATTTTGGCAATCTAAAGAAGTAATTGGTAACGATGCTAAAATAT
TTGTCGACTACGAAAATTGTATTGATTTGACTGATCAAAGCTCTATTGAA
GGTTACAAAAAAACATGGCAAGTAATTATAGACTTTAAAATTGATTTTGA
AGAGCAAATAGAGACACTATATTTTCGAACGAGCCAACAATTCATTGATG
ATTTCCGAAAGAGCTTACTGCAGGAGTACCAAGAAGACTCTGAGATTACA
GTCAAATACGATATCAGTTTCAGCAGACAAAATAAGACCGTAATTTGTTT
AAAAAATGAATCTTTGGAAATGTTTCTCTGGATTTTAGGTATTCCAGGAC
TTATGTTGGAAGGTTTGCTATTGTTTGATGAGAAATGTGGAAGTTGTTAT
TTTACCAAACGAATCACTATTCAAAAGAAAATATCATGAATGGCACATTG
GTGGTATTTCTCTGCTTAAACCTTTGTTTAAGATATGTCTTTCAAACAGT
ATACACAGACAAGAAAAAATACAACCACCTTATACTCAATATAGATGAGA
TGCGATGAATGGGCAGTCTTAATAGTACTAGCATTCTGTTGTCTTGTCTC
CTTGTCATTATTGGGAACTGATATCTATATATTTTACCGGTACCCAGCAG
AAAATGGAATGGTACAACTGTCGGCAAGTCTCTTGGCAGCAATCTTGATA
GAAGAATCACTTATTCGCATTATTTTCATATCATGGAGTGTGTTCACAAC
AATTTATATATTCGTTCTCATAATAACGAAAGTATTCCACCAATATTGGT
ATGGCAAAGAGAACTTCTCTATTCAAAAACAAACTCTATCAGAATTTATT
GACGAACAAATGAATACTGATCCACAAATCACAATTCGTTGTAAAGCTTT
TCGACCAAAATCGATTTGGAAATTTTGGCAATCTAAAGAAGTAATTGGTA
ACGATGCTAAAATATTTGTCGACTACGAAAATTGTATTGATTTGACTGAT
CAAAGCTCTATTGAAGGTTACAAAAAAACATGGCAAGTAATTATAGACTT
TAAAATTGATTTTGAAGAGCAAATAGAGACACTATATTTTCGAACGAGCC
AACAATTCATTGATGATTTCCGAAAGAGCTTACTGCAGGAGTACCAAGAA
GACTCTGAGATTACAGTCAAATACGATATCAGTTTCAGCAGACAAAATAA
GACCGTAATTTGTTTAAAAAATGAATCTTTGGAAATGTTTCTCTGGATTT
TAGGTATTCCAGGACTTATGTTGGAAGGTTTGCTATTGTTTGATGAGAAA
TGTGGAAGTTGTTATTTTACCAAACGAATCACTATTCAAAAGAAAATATC
ATGAATGGCACATTGGTGGTATTTCTCTGCTTAAACCTTTGTTTAAGATA
TGTCTTTCAAACAGTATACACAGACAAGAAAAAATACAACCACCTTATAC
TCAATATAGATGAGATGCGATGAATGGGCAGTCTTAATAGTACTAGCATT
CTGTTGTCTTGTCTCCTTGTCATTATTGGGAACTGATATCTATATATTTT
ACCGGTACCCAGCAGAAAATGGAATGGTACAACTGTCGGCAAGTCTCTTG
GCAGCAATCTTGATAGAAGAATCACTTATTCGCATTATTTTCATATCATG
GAGTGTGTTCACAACAATTTATATATTCGTTCTCATAATAACGAAAGTAT
TCCACCAATATTGGTATGGCAAAGAGAACTTCTCTATTCAAAAACAAACT
CTATCAGAATTTATTGACGAACAAATGAATACTGATCCACAAATCACAAT
TCGTTGTAAAGCTTTTCGACCAAAATCGATTTGGAAATTTTGGCAATCTA
AAGAAGTAATTGGTAACGATGCTAAAATATTTGTCGACTACGAAAATTGT
ATTGATTTGACTGATCAAAGCTCTATTGAAGGTTACAAAAAAACATGGCA
AGTAATTATAGACTTTAAAATTGATTTTGAAGAGCAAATAGAGACACTAT
ATTTTCGAACGAGCCAACAATTCATTGATGATTTCCGAAAGAGCTTACTG
CAGGAGTACCAAGAAGACTCTGAGATTACAGTCAAATACGATATCAGTTT
CAGCAGACAAAATAAGACCGTAATTTGTTTAAAAAATGAATCTTTGGAAA
TGTTTCTCTGGATTTTAGGTATTCCAGGACTTATGTTGGAAGGTTTGCTA
TTGTTTGATGAGAAATGTGGAAGTTGTTATTTTACCAAACGAATCACTAT
TCAAAAGAAAATATCATGAATGGCACATTGGTGGTATTTCTCTGCTTAAA
CCTTTGTTTAAGATATGTCTTTCAAACAGTATACACAGACAAGAAAAAAT
ACAACCACCTTATACTCAATATAGATGAGATGCGATGAATGGGCAGTCTT
AATAGTACTAGCATTCTGTTGTCTTGTCTCCTTGTCATTATTGGGAACTG
ATATCTATATATTTTACCGGTACCCAGCAGAAAATGGAATGGTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
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| TCONS_00037931-exon-sc0001738-1575043694:15111..15136 | TCONS_00037931-exon-sc0001738-1575043694:15111..15136 | Clytia hemisphaerica | exon |
| TCONS_00037931-exon-sc0001738-1575043694:12991..13112 | TCONS_00037931-exon-sc0001738-1575043694:12991..13112 | Clytia hemisphaerica | exon |
| TCONS_00037931-exon-sc0001738-1575043694:12827..12931 | TCONS_00037931-exon-sc0001738-1575043694:12827..12931 | Clytia hemisphaerica | exon |
| TCONS_00037931-exon-sc0001738-1575043694:11345..12496 | TCONS_00037931-exon-sc0001738-1575043694:11345..12496 | Clytia hemisphaerica | exon |
| TCONS_00037931-exon-sc0001738-1510915933:15111..15136 | TCONS_00037931-exon-sc0001738-1510915933:15111..15136 | Clytia hemisphaerica | exon |
| TCONS_00037931-exon-sc0001738-1510915933:12991..13112 | TCONS_00037931-exon-sc0001738-1510915933:12991..13112 | Clytia hemisphaerica | exon |
| TCONS_00037931-exon-sc0001738-1510915933:12827..12931 | TCONS_00037931-exon-sc0001738-1510915933:12827..12931 | Clytia hemisphaerica | exon |
| TCONS_00037931-exon-sc0001738-1510915933:11345..12496 | TCONS_00037931-exon-sc0001738-1510915933:11345..12496 | Clytia hemisphaerica | exon |
| TCONS_00037931-exon-sc0001738-1491911889:15111..15136 | TCONS_00037931-exon-sc0001738-1491911889:15111..15136 | Clytia hemisphaerica | exon |
| TCONS_00037931-exon-sc0001738-1491911889:12991..13112 | TCONS_00037931-exon-sc0001738-1491911889:12991..13112 | Clytia hemisphaerica | exon |
| TCONS_00037931-exon-sc0001738-1491911889:12827..12931 | TCONS_00037931-exon-sc0001738-1491911889:12827..12931 | Clytia hemisphaerica | exon |
| TCONS_00037931-exon-sc0001738-1491911889:11345..12496 | TCONS_00037931-exon-sc0001738-1491911889:11345..12496 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001738 | supercontig | sc0001738:11345..15136 - |
Blast
The following BLAST results are available for this feature:
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