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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037915 ID=TCONS_00037915|Name=TCONS_00037915|organism=Clytia hemisphaerica|type=transcript|length=748bp
AAGATTCAAATGTCTCAAATCTATCCAAAATTGATGAACTTTCTAATACA
CTTGAATCCACTGAGAAATCTCTTCTAACACAAATATCAGAGTTGAAACA
CGAACTTGCTTCACAGACCGACAGGGGGATGAGAAGCACCCTAACCTTTC
GTGGAATCACCGAATCTGATGGAGAAGGGTATcagaaaacaccaaaaatc
ttgGCAAATCAATTAGCCCACATGGAGGAAGTGGTTAGAGGCAGTAACAG
ATTAACGTACTCAGAAATTATTGACTCCATTGATCGTGCTCATAGATCCA
GAAAGAGTAACAACGTCACCTCGTCGCCTCGTCCAATCCATGTGAAATTT
ATCGCCTGGAGAGATTCTGATTATCTTAAAGCAACAGTTATTAAATTCAA
CAAATCGTTACTTGCAAAAGGAGAGGAACCAACTGTGTTTGTGGACAATA
TGTACAGTGAACATACAAATGCGAGGAGGAAGCTAGCCTGGAACAAACTG
AAAACTCTCAGGAATGAAGGCAATAAAGTTCCCATGTACGTTAAGTATCC
AGCCACACTAGTCGTCAAAAACAATAACACTGGGAAATATGATACTCACA
CAATTTTCTGAAAACTTGAGTGACTATGCTTATTTATGAGTTTTACCTAT
TTTATTCAAACACGGCTCCCTTTTTCAATGTCCCTTCTCCTTGTGACTTG
GTCTACCCTCGTCCCTTGTTCAAAAGCACCTGATTCTTGCCTGCTGAC Run BLAST on NCBI protein sequence of TCONS_00037915-protein >TCONS_00037915-protein ID=TCONS_00037915-protein|Name=TCONS_00037915-protein|organism=Clytia hemisphaerica|type=polypeptide|length=202bp
DSNVSNLSKIDELSNTLESTEKSLLTQISELKHELASQTDRGMRSTLTFR
GITESDGEGYQKTPKILANQLAHMEEVVRGSNRLTYSEIIDSIDRAHRSR
KSNNVTSSPRPIHVKFIAWRDSDYLKATVIKFNKSLLAKGEEPTVFVDNM
YSEHTNARRKLAWNKLKTLRNEGNKVPMYVKYPATLVVKNNNTGKYDTHT
IF Run BLAST on NCBI transcript from alignment at sc0001735:8408..9155 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037915 ID=TCONS_00037915|Name=TCONS_00037915|organism=Clytia hemisphaerica|type=transcript|length=748bp|location=Sequence derived from alignment at sc0001735:8408..9155 (Clytia hemisphaerica)
GTCAGCAGGCAAGAATCAGGTGCTTTTGAACAAGGGACGAGGGTAGACCA
AGTCACAAGGAGAAGGGACATTGAAAAAGGGAGCCGTGTTTGAATAAAAT
AGGTAAAACTCATAAATAAGCATAGTCACTCAAGTTTTCAGAAAATTGTG
TGAGTATCATATTTCCCAGTGTTATTGTTTTTGACGACTAGTGTGGCTGG
ATACTTAACGTACATGGGAACTTTATTGCCTTCATTCCTGAGAGTTTTCA
GTTTGTTCCAGGCTAGCTTCCTCCTCGCATTTGTATGTTCACTGTACATA
TTGTCCACAAACACAGTTGGTTCCTCTCCTTTTGCAAGTAACGATTTGTT
GAATTTAATAACTGTTGCTTTAAGATAATCAGAATCTCTCCAGGCGATAA
ATTTCACATGGATTGGACGAGGCGACGAGGTGACGTTGTTACTCTTTCTG
GATCTATGAGCACGATCAATGGAGTCAATAATTTCTGAGTACGTTAATCT
GTTACTGCCTCTAACCACTTCCTCCATGTGGGCTAATTGATTTGCcaaga
tttttggtgttttctgATACCCTTCTCCATCAGATTCGGTGATTCCACGA
AAGGTTAGGGTGCTTCTCATCCCCCTGTCGGTCTGTGAAGCAAGTTCGTG
TTTCAACTCTGATATTTGTGTTAGAAGAGATTTCTCAGTGGATTCAAGTG
TATTAGAAAGTTCATCAATTTTGGATAGATTTGAGACATTTGAATCTT Coding sequence (CDS) from alignment at sc0001735:8408..9155 >TCONS_00037915 ID=TCONS_00037915|Name=TCONS_00037915|organism=Clytia hemisphaerica|type=CDS|length=609bp|location=Sequence derived from alignment at sc0001735:8408..9155 (Clytia hemisphaerica)
TCAGAAAATTGTGTGAGTATCATATTTCCCAGTGTTATTGTTTTTGACGA
CTAGTGTGGCTGGATACTTAACGTACATGGGAACTTTATTGCCTTCATTC
CTGAGAGTTTTCAGTTTGTTCCAGGCTAGCTTCCTCCTCGCATTTGTATG
TTCACTGTACATATTGTCCACAAACACAGTTGGTTCCTCTCCTTTTGCAA
GTAACGATTTGTTGAATTTAATAACTGTTGCTTTAAGATAATCAGAATCT
CTCCAGGCGATAAATTTCACATGGATTGGACGAGGCGACGAGGTGACGTT
GTTACTCTTTCTGGATCTATGAGCACGATCAATGGAGTCAATAATTTCTG
AGTACGTTAATCTGTTACTGCCTCTAACCACTTCCTCCATGTGGGCTAAT
TGATTTGCcaagatttttggtgttttctgATACCCTTCTCCATCAGATTC
GGTGATTCCACGAAAGGTTAGGGTGCTTCTCATCCCCCTGTCGGTCTGTG
AAGCAAGTTCGTGTTTCAACTCTGATATTTGTGTTAGAAGAGATTTCTCA
GTGGATTCAAGTGTATTAGAAAGTTCATCAATTTTGGATAGATTTGAGAC
ATTTGAATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037915-exon-sc0001735-1491911889:8408..9155 | TCONS_00037915-exon-sc0001735-1491911889:8408..9155 | Clytia hemisphaerica | exon |
| TCONS_00037915-exon-sc0001735-1510915933:8408..9155 | TCONS_00037915-exon-sc0001735-1510915933:8408..9155 | Clytia hemisphaerica | exon |
| TCONS_00037915-exon-sc0001735-1575043694:8408..9155 | TCONS_00037915-exon-sc0001735-1575043694:8408..9155 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001735 | supercontig | sc0001735:8408..9155 . |
Blast
The following BLAST results are available for this feature:
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