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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037891 ID=TCONS_00037891|Name=TCONS_00037891|organism=Clytia hemisphaerica|type=transcript|length=314bp
AAGAAGTAAATATCAAAGATTTACTGAACACGTTTATGGAGAGAAACGAA
TGCAAGTTCCCATATGATGATGAAAAATATACTATTCAGAAAGGTGAAAG
CGTTTACGCAAGAAAATTCTTTCGGAAGCTTCCAGAAGTTCTTTTTCTTG
AATTCAAAGATTCATCGAAACTTGTGCTTGTAgacgaaatcaaaaaaata
aatcttcacgatacgaaagatttttccaaaggAGTACTTTCCCTCACCGC
TGTTGTTGCAATTTGTGAAGATAAACATATCATAGCCCTACGTCATAAAA
GAAACAAATTTGTG Run BLAST on NCBI protein sequence of TCONS_00037891-protein >TCONS_00037891-protein ID=TCONS_00037891-protein|Name=TCONS_00037891-protein|organism=Clytia hemisphaerica|type=polypeptide|length=104bp
EVNIKDLLNTFMERNECKFPYDDEKYTIQKGESVYARKFFRKLPEVLFLE
FKDSSKLVLVDEIKKINLHDTKDFSKGVLSLTAVVAICEDKHIIALRHKR
NKFV Run BLAST on NCBI transcript from alignment at sc0001732:27503..28967- Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037891 ID=TCONS_00037891|Name=TCONS_00037891|organism=Clytia hemisphaerica|type=transcript|length=1465bp|location=Sequence derived from alignment at sc0001732:27503..28967- (Clytia hemisphaerica)
AAGAAGTAAATATCAAAGATTTACTGAACACGTTTATGGAGAGAAACGAA
TGCAAGTTCCCATATGATGATGAAAAATATACTATTCAGAAAGGTATGTG
TTCTTAGATATGTGAAATGTGTAGCGGTTTAGTAGCATGACTGCCTTCCA
GGAGGTCAGGGTTTGATTCTTAGGTGATGTTGTGATACACTTGGCAAGAT
AATGTACCTTCTTTGCCTGGGGCAACCCGTGCACCGTGAGGGAATAAGGT
AGACATATTCCTAGAATGGGCTAAACCATTTTTGCTTGGTTTGGCTGTAT
TTTTCAAAAAATACAGGGGACTAGCTTTTAGGGTGGGGGCTTATAGTTGT
GTGATCAGATTGAGAGCAGAGCTGATCAGTTTCAATGAATTTTAAATCAT
GTTAAAAATCTATGCCATGTGGAAGGTCTTGACACCTCTACGAAAAAGGT
TTTTAAGATATAGCTGGTGGCAATTTTCGCTAGTCCCCCTAAAAATGCTG
GGAGCTTGACCCCTCTGCATTCTATGAATGTCAAGTAGCCTGTCAGTGAC
TGACCCAATTCAATCCATTGTGTATGAGGTGAGAGAGTACTAGTGAAAAT
GGTAGATAGATATGCTACTAGTACTTACAGCATTTAGAATGATATTACAC
TTCTTTACTTAGGTGAAAGCGTTTACGCAAGAAAATTCTTTCGGAAGCTT
CCAGAAGTTCTTTTTCTTGAATTCAAAGTAAGTAAGACATACACTCAAAT
GCCAAATAGACACCCCCTTGCCTGCCCTTGCTTGTAAATTTTTCGATTTT
TTTCCACCCCAGGGTACCACAGGAAAGTCCCTTATTAGTCCTGTAGAATT
TCCTTTTTGGGACTTTTTAAGCAATTTTTCACAACTTCGAGGCTTGATAT
TTCGAGTTAAGTACAAAATTCACCTATACTCGTAATATATATCTAATCCT
TATTTTTTGAGAGCTTCCAGATGATACTATTTTTCTTAATCTACTGTACA
TAAAATTTCCTTTTCAATGGTATATAATATTTATGTCTTTATCTAATATT
TTCCCACCTAAGACCCTTTTTTGTTGAAATTCTACAGGACTATATGTTGA
TTGTTTGAGAATGTCTGCTTATTTTGATAGGATTTTTTCAGAGAGTGATC
AATCTTGTATATTTTGAGAAAACTTTTTATTGCATTTTTTTAAGTTATAT
CAATTTCAGACTACAAATACCCTTGGTAAACTTGTTGCCATTCCTCTATT
CCTTCGAAAATTTAAGGGAGTGTTTTTGTGAATGCTAATATTGTCTCTTT
TTAACCTAGGATTCATCGAAACTTGTGCTTGTAGACGAAATCAAAAAAAT
AAATCTTCACGATACGAAAGATTTTTCCAAAGGAGTACTTTCCCTCACCG
CTGTTGTTGCAATTTGTGAAGATAAACATATCATAGCCCTACGTCATAAA
AGAAACAAATTTGTG Coding sequence (CDS) from alignment at sc0001732:27503..28967- >TCONS_00037891 ID=TCONS_00037891|Name=TCONS_00037891|organism=Clytia hemisphaerica|type=CDS|length=936bp|location=Sequence derived from alignment at sc0001732:27503..28967- (Clytia hemisphaerica)
GATTCATCGAAACTTGTGCTTGTAGACGAAATCAAAAAAATAAATCTTCA
CGATACGAAAGATTTTTCCAAAGGAGTACTTTCCCTCACCGCTGTTGTTG
CAATTTGTGAAGATAAACATATCATAGCCCTACGTCATAAAAGAAACAAA
TTTGTGGTGAAAGCGTTTACGCAAGAAAATTCTTTCGGAAGCTTCCAGAA
GTTCTTTTTCTTGAATTCAAAGAAGTAAATATCAAAGATTTACTGAACAC
GTTTATGGAGAGAAACGAATGCAAGTTCCCATATGATGATGAAAAATATA
CTATTCAGAAAGGATTCATCGAAACTTGTGCTTGTAGACGAAATCAAAAA
AATAAATCTTCACGATACGAAAGATTTTTCCAAAGGAGTACTTTCCCTCA
CCGCTGTTGTTGCAATTTGTGAAGATAAACATATCATAGCCCTACGTCAT
AAAAGAAACAAATTTGTGGTGAAAGCGTTTACGCAAGAAAATTCTTTCGG
AAGCTTCCAGAAGTTCTTTTTCTTGAATTCAAAGAAGTAAATATCAAAGA
TTTACTGAACACGTTTATGGAGAGAAACGAATGCAAGTTCCCATATGATG
ATGAAAAATATACTATTCAGAAAGGATTCATCGAAACTTGTGCTTGTAGA
CGAAATCAAAAAAATAAATCTTCACGATACGAAAGATTTTTCCAAAGGAG
TACTTTCCCTCACCGCTGTTGTTGCAATTTGTGAAGATAAACATATCATA
GCCCTACGTCATAAAAGAAACAAATTTGTGGTGAAAGCGTTTACGCAAGA
AAATTCTTTCGGAAGCTTCCAGAAGTTCTTTTTCTTGAATTCAAAGAAGT
AAATATCAAAGATTTACTGAACACGTTTATGGAGAGAAACGAATGCAAGT
TCCCATATGATGATGAAAAATATACTATTCAGAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037891-exon-sc0001732-1575043694:28875..28967 | TCONS_00037891-exon-sc0001732-1575043694:28875..28967 | Clytia hemisphaerica | exon |
| TCONS_00037891-exon-sc0001732-1575043694:28241..28305 | TCONS_00037891-exon-sc0001732-1575043694:28241..28305 | Clytia hemisphaerica | exon |
| TCONS_00037891-exon-sc0001732-1575043694:27503..27658 | TCONS_00037891-exon-sc0001732-1575043694:27503..27658 | Clytia hemisphaerica | exon |
| TCONS_00037891-exon-sc0001732-1510915933:28875..28967 | TCONS_00037891-exon-sc0001732-1510915933:28875..28967 | Clytia hemisphaerica | exon |
| TCONS_00037891-exon-sc0001732-1510915933:28241..28305 | TCONS_00037891-exon-sc0001732-1510915933:28241..28305 | Clytia hemisphaerica | exon |
| TCONS_00037891-exon-sc0001732-1510915933:27503..27658 | TCONS_00037891-exon-sc0001732-1510915933:27503..27658 | Clytia hemisphaerica | exon |
| TCONS_00037891-exon-sc0001732-1491911889:28875..28967 | TCONS_00037891-exon-sc0001732-1491911889:28875..28967 | Clytia hemisphaerica | exon |
| TCONS_00037891-exon-sc0001732-1491911889:28241..28305 | TCONS_00037891-exon-sc0001732-1491911889:28241..28305 | Clytia hemisphaerica | exon |
| TCONS_00037891-exon-sc0001732-1491911889:27503..27658 | TCONS_00037891-exon-sc0001732-1491911889:27503..27658 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001732 | supercontig | sc0001732:27503..28967 - |
Blast
The following BLAST results are available for this feature:
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