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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037887 ID=TCONS_00037887|Name=TCONS_00037887|organism=Clytia hemisphaerica|type=transcript|length=1501bp
ccaaaaattttggcaGTCGGAAACTTTCAAGTCGGAAAGGATGACGTAAT
AAAATacagagtctccataacttgaaccTACATAACTCCTTAACTTAAAC
GATTCTTTTGATACCTTCCGAACAAATTCAGGCTATTTtcagtctcctta
actcgagcgAAGTCTTTGAGAATTCGATTTATGGAGACTTCATTGTATCG
TTGGAAAAATGATTCTTAGCATACAATTTACAGACGCATAAATTTAGATA
TACAGTAGAATAAAATCATGAGTTTtcagtttcattttcaaattttttgt
gaaTTGTAAAAATCATCTCTGACAATTATTATTTCAACGACACATCGTTT
TCtacaaaagatgtttttttctttgagaGCAATCTATGAAAACGCTCCGA
TTGCCAGGATTTCTGGATCagactttcttcttttttacaaTTATATACAG
CCGTTAAAAAATCTGGTCCTAAGTTACAAAGGTTAAAAACATATGTACAC
TTTTACATAAATCAATGTGTGTGGTTAGTGTTTCATTGGAGTGATAGGCG
AACCGGGGACTAAGCCAACCCCTGGAATATGCAACCAAACTTCTTGATGC
TTCTCAATTTTATGTGGAtccaaaacaaatttctttACGAGGGTTTGAAT
GCCCTGGCTAAAATCTTCTTTCGAATACGAACTCAGCTCATCGATAGAAG
AACAGAAACCCAACCGCATCTCTTGCTTTTTGACCACAATTTTATATAAG
TCCTCTGACAGAGAGGCATTGTGCTCCGATCGAACACTCGGTGGGATCAA
CATAAATCCACTGACAAGTGTTTTTTCGACACCGTATGGGATTTGCAATT
TTTGTCTCAGCATCTTATTTAACGTGATTCGGGAGAGTTCTTCAGGGGTG
TAGTCCTTGAATTCGAATCTTTCCTTAATCCTTCTTCGCACACCACGGtt
tactttttccaaaaatttatcCATATCTTTTGGGTATCCAGCAAAAATGA
ACACTGGGTATAGATCTTTTTGACCACTTGGAGGAGGGTTCATGTACCTC
ATTATGGTCTCAATTGCTTCGTTGGAGTGAGTCGATGGATCGGTTTCTTT
ATTTGGCACTAATTGGTATGCTTCATCTATAAACATAAGCTTGCCGAAGG
CAGATTCGATGACTTTTTTGCAGTCTTTGGCAGTTGCAGAAACGTACCCA
GAGACAATATTTTCCTTCTGAACTTCAACAATGTCCGGAGATTCCAGAAC
TTCGAGCTCGTGTAGTATACTTGCTAAACATCTGGCGATCATCGTTTTTC
CAGTACCAGGATTACCGCTCAAAATCATGTGCATATTGGATACCATTTCA
CCACGTGTTAAAGAGCCAATGTTATTCTTTCGTTTAAGGTCTTGCATCAG
TGTATGATGAGCCCATTCAAAAATATGTTGCTTTAATTCATCTTGACCTT
CAATCAGGGAAAGTTGAGCATTGAGCTTTTCAATTATTCTGTCGAATTct
g Run BLAST on NCBI transcript from alignment at sc0001732:24210..25916+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037887 ID=TCONS_00037887|Name=TCONS_00037887|organism=Clytia hemisphaerica|type=transcript|length=1707bp|location=Sequence derived from alignment at sc0001732:24210..25916+ (Clytia hemisphaerica)
ccaaaaattttggcaGTCGGAAACTTTCAAGTCGGAAAGGATGACGTAAT
AAAATacagagtctccataacttgaaccTACATAACTCCTTAACTTAAAC
GATTCTTTTGATACCTTCCGAACAAATTCAGGCTATTTtcagtctcctta
actcgagcgAAGTCTTTGAGAATTCGATTTATGGAGACTTCATTGTATCG
TTGGAAAAATGATTCTTAGCATACAATTTACAGACGCATAAATTTAGATA
TACAGTAGAATAAAATCATGAGTTTtcagtttcattttcaaattttttgt
gaaTTGTAAAAATCATCTCTGACAATTATTATTTCAACGACACATCGTTT
TCtacaaaagatgtttttttctttgagaGCAATCTATGAAAACGCTCCGA
TTGCCAGGATTTCTGGATCagactttcttcttttttacaaTTATATACAG
CCGTTAAAAAATCTGGTCCTAAGTTACAAAGGTTAAAAACATATGTACAC
TTTTACATAAATCAATGTGTGTGGTTAGTGTTTCATTGGAGTGATAGGCG
AACCGGGGACTAAGCCAACCCCTGGAATATGCAACCAAACTTCTTGATGC
TTCTCAATTTTATGTGGAtccaaaacaaatttctttACGAGGGTTTGAAT
GCCCTGGCTAAAATCTTCTTTCGAATACGAACTCAGCTCATCGATAGAAG
AACAGAAACCCAACCGCATCTCTTGCTTTTTGACCACAATTTTATATAAG
TCCTCTGACAGAGAGGCATTGTGCTCCGATCGAACACTCGGTGGGATCAA
CATAAATCCACTGACAAGTGTTTTTTCGACACCGTATGGGATTTGCAATT
TTTGTCTCAGCATCTTATTTAACGTGATTCGGGAGAGTTCTTCAGGGGTG
TAGTCCTTGAATTCGAATCTTTCCTTAATCCTTCTTCGCACACCACGGtt
tactttttccaaaaatttatcCATATCTTTTGGGTATCCAGCAAAAATGA
ACACTGGGTATAGATCTTTTTGACCACTTGGAGGAGGGTTCATGTACCTC
ATTATGGTCTCAATTGCTTCGTTGGAGTGAGTCGATGGATCGGTTTCTTT
ATTTGGCACTAATTGGTATGCTTCATCTATAAACATAAGCTTGCCGAAGG
CAGATTCGATGACTTTTTTGCAGTCTTTGGCAGTTGCAGAAACGTACCCA
GAGACAATATTTTCCTTCTGAACTTCAACAATGTCCGGAGATTCCAGAAC
TTCGAGCTCGTGTAGTATACCTGAAgttaaaaggtaaaaaaaatattcat
ctaTAGTGTTCGCAAACAACAAATATAGTCcgttcattttcaatttcttt
aaacTATCAAATACAGTGAAATTTTAGGGTTTAAAAAAGAACCATTATCC
ACATGATGTGAACGGAATATATATCAGTCAACTCCAAATTTCAATTTGAG
AATATACCGTTTAAGTAAAAACATACTTGCTAAACATCTGGCGATCATCG
TTTTTCCAGTACCAGGATTACCGCTCAAAATCATGTGCATATTGGATACC
ATTTCACCACGTGTTAAAGAGCCAATGTTATTCTTTCGTTTAAGGTCTTG
CATCAGTGTATGATGAGCCCATTCAAAAATATGTTGCTTTAATTCATCTT
GACCTTCAATCAGGGAAAGTTGAGCATTGAGCTTTTCAATTATTCTGTCG
AATTctg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037887-exon-sc0001732-1491911889:24210..25475 | TCONS_00037887-exon-sc0001732-1491911889:24210..25475 | Clytia hemisphaerica | exon |
| TCONS_00037887-exon-sc0001732-1510915933:24210..25475 | TCONS_00037887-exon-sc0001732-1510915933:24210..25475 | Clytia hemisphaerica | exon |
| TCONS_00037887-exon-sc0001732-1575043694:24210..25475 | TCONS_00037887-exon-sc0001732-1575043694:24210..25475 | Clytia hemisphaerica | exon |
| TCONS_00037887-exon-sc0001732-1491911889:25682..25916 | TCONS_00037887-exon-sc0001732-1491911889:25682..25916 | Clytia hemisphaerica | exon |
| TCONS_00037887-exon-sc0001732-1510915933:25682..25916 | TCONS_00037887-exon-sc0001732-1510915933:25682..25916 | Clytia hemisphaerica | exon |
| TCONS_00037887-exon-sc0001732-1575043694:25682..25916 | TCONS_00037887-exon-sc0001732-1575043694:25682..25916 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001732 | supercontig | sc0001732:24210..25916 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005524 |
ATP binding |
Blast
The following BLAST results are available for this feature:
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