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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037886 ID=TCONS_00037886|Name=TCONS_00037886|organism=Clytia hemisphaerica|type=transcript|length=848bp
ATTTGAGAGTTATATAGACCTGGCGATCAAAATCATCAGTTTTCAAACAA
TGTTTGTGCTACTTTTAATATCATTCTTGAGATACCAAAGCATAGTGTAC
CCTTTCACAAAGAAGATCAACAAACGGCAAAGTATGTATCTGTCCATGGC
AGGTATGTTGATTTCGATTCTACTATGGGGTGCATGGTTTTTGATGTGGC
TTTATGGATGGGAGGACGTTTTATACCGAACAGTCATCGACCTTTCAACT
AGATGTACCTTACTGTTGATCCTAATCATTTTCTATAGAAAGACTTCCAG
CGCTTTGGAAAGATCAGTGGAGAACAGCAAAGCGAAAGAGCGAAACAAAA
TAGCTTTAAAGACTTTGAAGTTCTTGCTATGGTTGTTTGCAATTACgatg
actttttcgaaagttttgaatttctgtTTGGGTGAGATTAACACATCAAA
AATGAGCACAGATTGGGTAACCGTATTGCTGTATGTCCGAGCTGTTTTAT
TGAATATGCCCCTCATCAACAGTGTTGCGAACTGTTTCATTTATATGAAA
ATGAATCCAGAGTTTCGCTCGTTTGTCTTAAACGTCTTTACTGTGAAACA
ATGTGGAAGAAAGACGTGATAGAGTGACAATAAGCAAGCAAACGCCGAAA
ACTTAAAACTTATCGCAGTGGAGTTTTTCGAATCGAGATCAATAAAGGAA
TGAGGTTGAGGTAGATGATTTTTTATGATGAGCTACACGGTgggaaaatt
aactttttcagaACGCATATCACTTCACTCAGTTGAAGGGTTCAAGGGCA
ATAAGGATTTGTCGAATATGCCATTCATATTTTTGACAGTTCTCTAAC Run BLAST on NCBI protein sequence of TCONS_00037886-protein >TCONS_00037886-protein ID=TCONS_00037886-protein|Name=TCONS_00037886-protein|organism=Clytia hemisphaerica|type=polypeptide|length=205bp
FESYIDLAIKIISFQTMFVLLLISFLRYQSIVYPFTKKINKRQSMYLSMA
GMLISILLWGAWFLMWLYGWEDVLYRTVIDLSTRCTLLLILIIFYRKTSS
ALERSVENSKAKERNKIALKTLKFLLWLFAITMTFSKVLNFCLGEINTSK
MSTDWVTVLLYVRAVLLNMPLINSVANCFIYMKMNPEFRSFVLNVFTVKQ
CGRKT Run BLAST on NCBI transcript from alignment at sc0001731:39907..40754 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037886 ID=TCONS_00037886|Name=TCONS_00037886|organism=Clytia hemisphaerica|type=transcript|length=848bp|location=Sequence derived from alignment at sc0001731:39907..40754 (Clytia hemisphaerica)
GTTAGAGAACTGTCAAAAATATGAATGGCATATTCGACAAATCCTTATTG
CCCTTGAACCCTTCAACTGAGTGAAGTGATATGCGTtctgaaaaagttaa
ttttcccACCGTGTAGCTCATCATAAAAAATCATCTACCTCAACCTCATT
CCTTTATTGATCTCGATTCGAAAAACTCCACTGCGATAAGTTTTAAGTTT
TCGGCGTTTGCTTGCTTATTGTCACTCTATCACGTCTTTCTTCCACATTG
TTTCACAGTAAAGACGTTTAAGACAAACGAGCGAAACTCTGGATTCATTT
TCATATAAATGAAACAGTTCGCAACACTGTTGATGAGGGGCATATTCAAT
AAAACAGCTCGGACATACAGCAATACGGTTACCCAATCTGTGCTCATTTT
TGATGTGTTAATCTCACCCAAacagaaattcaaaactttcgaaaaagtca
tcGTAATTGCAAACAACCATAGCAAGAACTTCAAAGTCTTTAAAGCTATT
TTGTTTCGCTCTTTCGCTTTGCTGTTCTCCACTGATCTTTCCAAAGCGCT
GGAAGTCTTTCTATAGAAAATGATTAGGATCAACAGTAAGGTACATCTAG
TTGAAAGGTCGATGACTGTTCGGTATAAAACGTCCTCCCATCCATAAAGC
CACATCAAAAACCATGCACCCCATAGTAGAATCGAAATCAACATACCTGC
CATGGACAGATACATACTTTGCCGTTTGTTGATCTTCTTTGTGAAAGGGT
ACACTATGCTTTGGTATCTCAAGAATGATATTAAAAGTAGCACAAACATT
GTTTGAAAACTGATGATTTTGATCGCCAGGTCTATATAACTCTCAAAT Coding sequence (CDS) from alignment at sc0001731:39907..40754 >TCONS_00037886 ID=TCONS_00037886|Name=TCONS_00037886|organism=Clytia hemisphaerica|type=CDS|length=618bp|location=Sequence derived from alignment at sc0001731:39907..40754 (Clytia hemisphaerica)
TCACGTCTTTCTTCCACATTGTTTCACAGTAAAGACGTTTAAGACAAACG
AGCGAAACTCTGGATTCATTTTCATATAAATGAAACAGTTCGCAACACTG
TTGATGAGGGGCATATTCAATAAAACAGCTCGGACATACAGCAATACGGT
TACCCAATCTGTGCTCATTTTTGATGTGTTAATCTCACCCAAacagaaat
tcaaaactttcgaaaaagtcatcGTAATTGCAAACAACCATAGCAAGAAC
TTCAAAGTCTTTAAAGCTATTTTGTTTCGCTCTTTCGCTTTGCTGTTCTC
CACTGATCTTTCCAAAGCGCTGGAAGTCTTTCTATAGAAAATGATTAGGA
TCAACAGTAAGGTACATCTAGTTGAAAGGTCGATGACTGTTCGGTATAAA
ACGTCCTCCCATCCATAAAGCCACATCAAAAACCATGCACCCCATAGTAG
AATCGAAATCAACATACCTGCCATGGACAGATACATACTTTGCCGTTTGT
TGATCTTCTTTGTGAAAGGGTACACTATGCTTTGGTATCTCAAGAATGAT
ATTAAAAGTAGCACAAACATTGTTTGAAAACTGATGATTTTGATCGCCAG
GTCTATATAACTCTCAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037886-exon-sc0001731-1491911889:39907..40754 | TCONS_00037886-exon-sc0001731-1491911889:39907..40754 | Clytia hemisphaerica | exon |
| TCONS_00037886-exon-sc0001731-1510915933:39907..40754 | TCONS_00037886-exon-sc0001731-1510915933:39907..40754 | Clytia hemisphaerica | exon |
| TCONS_00037886-exon-sc0001731-1575043694:39907..40754 | TCONS_00037886-exon-sc0001731-1575043694:39907..40754 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001731 | supercontig | sc0001731:39907..40754 . |
Blast
The following BLAST results are available for this feature:
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