TCONS_00037878 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037878
Unique NameTCONS_00037878
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length239

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037878 ID=TCONS_00037878|Name=TCONS_00037878|organism=Clytia hemisphaerica|type=transcript|length=239bp
CCAGAACGAAAAAAAATCTATCAGTTGATTgtatattgtaatttttaatg
acaatgaaaaagaaaacataataAGAAAGTGAAGCATGTCTAGGTAGCAA
TAATAAAACAATATGCTCAAAGTCAGAACTATTTGCCTAGTTTACAAAAT
GATACTATCATATTAGGATCCTAATAGCCATTAGCCATTATCATAATCCT
GTAAATTATTCAtaaaaagagaatactaaacaaaaaaat
Run BLAST on NCBI

transcript from alignment at sc0001730:4..242

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037878 ID=TCONS_00037878|Name=TCONS_00037878|organism=Clytia hemisphaerica|type=transcript|length=239bp|location=Sequence derived from alignment at sc0001730:4..242 (Clytia hemisphaerica)
atttttttgtttagtattctctttttaTGAATAATTTACAGGATTATGAT
AATGGCTAATGGCTATTAGGATCCTAATATGATAGTATCATTTTGTAAAC
TAGGCAAATAGTTCTGACTTTGAGCATATTGTTTTATTATTGCTACCTAG
ACATGCTTCACTTTCTtattatgttttctttttcattgtcattaaaaatt
acaatatacAATCAACTGATAGATTTTTTTTCGTTCTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022580XLOC_022580Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037878-exon-sc0001730-1491911889:4..242TCONS_00037878-exon-sc0001730-1491911889:4..242Clytia hemisphaericaexon
TCONS_00037878-exon-sc0001730-1510915933:4..242TCONS_00037878-exon-sc0001730-1510915933:4..242Clytia hemisphaericaexon
TCONS_00037878-exon-sc0001730-1575043694:4..242TCONS_00037878-exon-sc0001730-1575043694:4..242Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001730supercontigsc0001730:4..242 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00037878 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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