TCONS_00037875 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037875
Unique NameTCONS_00037875
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4327

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037875 ID=TCONS_00037875|Name=TCONS_00037875|organism=Clytia hemisphaerica|type=transcript|length=4327bp
atttcCTATCCAGAACGCCGGGCGTGGATTTTACACAAAcaccagattga
aagtaaaatcctcagtgcagtcctcaaaaacaaaggaaccgctagattcA
TTCATTGGTACGTCATGAGTGTGGCGGGTTCTAGGTGcgtcctggatggg
aaataagtggcttcactttttcttgcctaggATAGGTTAGAGGTTCTACC
TCTAGCCTTATATATATgctgtaaaatattttcttccaaTACACACAGAT
ATTATAAAGAATGTCTCAGGAGAATGTGGTAATTAGTTTTGTTGGGCAAA
AGATATCCAATCTGTGTTGGTGCACAAAGCGGGATGGTTCAACAAGCCAA
GATGAGTTTCTGACAGGTGGTTACGACGATGAGGTGAATTCCCTTTGTTT
GTGGAAAATCCCTGATGAAGCGATGGATATCTCAACAGAACCCTTTGTTG
TAGCACAGAAAGAGGTCCCAATAGGTTCAGTGACAGGAATCAAACAAACC
TCATCATCCACAGTCTTCTACACTACCAACACTGGAAGTCTGACACTTCT
AGATTTTGATATCCACACTAATACGTTTGTAGACAGACAGTGTTGGAATA
AACTCCATCGTTATGATGTCACTGATGAGTTGGCTCCTTGTTGTACCTTT
GATGTCAGTGGACAGGAGATTATTACAGGTGGTGAAGATGGTCGAATGAA
TATCTTACACATTGATCGTAAAGACCCTATCTACACTATGGACGTGATGG
ATAGTTCCAATGTGACAGGAATCCAATACATTACTTCCAAGGAATTCCTT
TCAATCAACTCCACTGGACAACTCAAAATCTGGGATACACGAAAACTTGC
CAAGGACAATAAACCATCTAAAACGTTGACACTTTCAGGCAATGCATGTC
CTTTACTGTCAGTAGACAAGCACCCGAACCAACCACATATTGTGGTAACG
GGGCACGGTGACGGAGTTATTGGTATATGGGATACGCGTCAAGAAAAAGC
TCCAGTAACACTCATTGATGCTCATTCAGCAGAGGTTTGGCAAGTAAAAT
TCCATCCAATGTATCCGGACAATTTGTTTACTTGCTCAGAAGATGGTTCC
TGCTGGTTTTGGGGTGGCTCTTCCATGATTTCAGGTGCTAACCAGGTCAA
GACTTTATCTGAAACTGGCCTTGGTGGAGGTTTATCATTTCACCAGCAGA
ATATGATGGATGCTGTTTCATCCAGTATCTGGCTGTACGTGGATGCCAAT
AAGCATAAAATGGAAACTTTCTCTTTGGTTCCCTTCAACCAGAGTGCTGT
CAATACTTTCGATGTGAACGCTTCTCGATTGATATGTGGAACGGATAATG
AGGCCATCATTTGTGTCAATGATATTCCTCTACACTAGCTTTTGTATAAT
TAGCGTCTCTAGAGTTCGGTTCTCCCTCTTATCATGTTACGTTTAAAGTT
TATCTGAAACTTTCGATGTAGAATTATCGCCCGGATCATTCATCAGCTTT
TACTATTCTAGCTGTTTTCAAAGAATTTAACTTATAGAAACATTAAAAGA
CCTTCCTACGCTTTTTAAAAGGAATTAGATAACAGGAACcgggaaaatat
atatatttttgtaaatagcaTGCAAACACATCAACCAATGAACAAAAGAA
GAACAATCATGGTTTTATATTGAAATAAACTCTAACTAATGTCAACCTAT
ACTAATCAAATACATGCCAACTGTTTGAATACAATGGAACTCTCATAACT
TTAAATATTATTACAGTGTTACCAAATAACCTCTTCTTACacttttgcta
attttaactctaaatttcttttccattttagaagattaaaaattaaaaaa
tacattgaTAATTATGACAATGGAGACTGGCAAAGAGAAATCGTCGAAAA
GTCAGCTGAAGCAAAAACAGCGTAATGCGAAGAAATATCATAAGAAAGCA
ACCAATCTATTGAAAGAGTTCGAGGGCCTAAATATAACGTCCACGCCCTC
GGTTTGTTTGTTCATCGGCAATGGCGGTATGTTGTGTGGTCAAACACGAG
AAAATCTGTTGGAACTTTTCACGTCTTACGGAGTTGTGGCTGATCTGGTA
ATGTTACCGAAGAAATCCTTTGCGTTGGTACAAATGCAGTCGATCGTTTG
CGCTGAAAAAGCTGTCAATGCACTCGAAGGTCACATTCTAAACAATTGTG
ATAACGTGAAACAACCAACAAGCGTTCCCCTTTACTTCCAGTATTTAGAT
ACACCTGACTTGCACTTCTTGAGAAAGAGTGCTGAGAACGAGAGCTATCC
AGACGAAGATGTAGGTGAAGGGCTGATTGAGGGATTGGAGATCTATCGAG
AATTCATTGATGAAGAATATGAAAAAGACTTATTCGATTTCTTTCACCGG
CAATGTTGTGACCAAGAAGCCGGTGAAAATGTGCTTAAACATCGCAGTGT
TTTGCATTACGGCTATAAATTCCTTTATGGAAGCAACAATATTGATAAAG
AGAAACCGATGGATGAAGGGATACCACGAATCTGCCAACAATTACTGGAC
AAGATGCTGGCTGATGGTCTCATACACGAACTTCCTGATCAACTCACCAT
AAACCAATATCGACCTGGACAAGGTATTCCGCCACATGTGGACACCCATT
CCGCCTTCCAAGATGGAATATTTTCGCTCACACTAAATTCACCGGTATCG
ATGGACTTTACAAACCCAGAAGGACGAACGAAGTCAGTTTCTCTTGCACG
GCGAAGTTTGCTTGCAATGAAAGGAGAGTCCAGATATTTGTGGTCTCATG
GAATAACACCTCGGAAGTACGATATTGTATTTTGTAAAGATCCTACCCAA
AATACCGAAGATGAAAATGCAAAACATTTAACGATGCGCGAACGTGGTAT
ACGGATATCATTGACGTTCCGCAAAATATTACGCGGTGAATGTCGATgtg
ctttttcaacaaaatgcGATTCGCAGAACGATGACGTCACCAAGAAAACA
TGGGCTGTACCTTTGTCTCAAAAGGAGGCTAGTTCCCTCGAAGACGAACT
TGTTTACAAAGTCTATGATGAAATCGCAGAACATTTTAGTGACACGCGTC
ATTCCCCTTGGCCACGTGTTAAGAagtttttgtgtaatttacCGAACGGA
AGTATCGTAGCAGATGTTGGGTGTGGTAATGGGAAATATTTGGGCGTCAA
TAACCAGTTGATGATGATGGGATCGGATCGAAGTGTGAACTTGGCAAGCA
TTTGCGAAGAACGAGGACATCAAATCATGGTGTCCGATTGCTTGACTTTA
CCATACAGGTCATCTTGTTTCGATGGTTGTATTTGCATCGCGGTCATTCA
TCACCTGTCTACAGAGCAACGTCGATTGGAAGCTATACAAGAGCTTGTTC
GAATCACACGCGTCAGAGGCTTAATCCTTGTCTACGTATGGGCGCTCGAG
CAAGATACCGAGGAAGAAAATGAAGGTGTCTTATTAGGTACTGATGGAAC
AAAAATATTAAACCCTAGCTATTCTATTGATAGTGAAAAACTAGAAGCTC
TAGATTTAGAGACAAATAAATATTCTGTTTCAAAGGAATCGAACGATAAA
CAATATATCCAAATAGCAGAAGGTCGAAATACTTTTCAACAGCAAGATTT
ATTAGTACCCTGGCATTTGAAGAATACGAACCCTTCTCGAGAGGAACATG
TTTTTCATCGTTTTTACCATGTGTTCAAAAGAGGTGAACTGGAGACATTG
TGTCGTCAACTCCCCAACGTTGAAGTGAGAGATTTGTACTTGGACTGTGG
AAATTGGTGTATTGTTTTACAAAAGGTATCTTCTTGACCTGCAGCAACCT
TGTTTTATTCTTTAGGCGGAAATAGCGGAATGATGTGTTTCCGGAATggg
ttcttccagaaaaaattagAATATGGAGGGCGGaggatataaattttttt
tgaaatttatcccCCGAACATTTTGACTTTTGagccccggacagcaggtc
ttacccacagatttataaagcccgaagggctagatgtcgtgcttgaAGCC
ATTGCACACAAAAATAATTGAGcattggaaaaaatattgttcatATTgtg
aaaacccgcgaagcttctgattggtcaagcgtagactatgttatagtcta
agacgaatcactatctaagaaaaaagcccaaagccgaagaacaTTCGCAA
ACGGATTTTTTTaacgaaaagagtttacagtcggtagagttgccagtctt
agactatacgattttggcgcaaaatacaaaaacagccaaaatcgTATGAA
TTTGAGTTTCTGTATGCGAGGCCAGCC
Run BLAST on NCBI

transcript from alignment at sc0001729:29013..37876-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037875 ID=TCONS_00037875|Name=TCONS_00037875|organism=Clytia hemisphaerica|type=transcript|length=8864bp|location=Sequence derived from alignment at sc0001729:29013..37876- (Clytia hemisphaerica)
ATTTCCTATCCAGAACGCCGGGCGTGGATTTTACACAAACACCAGATTGA
AAGTAAAATCCTCAGTGCAGTCCTCAAAAACAAAGGAACCGCTAGATTCA
TTCATTGGTACGTCATGAGTGTGGCGGGTTCTAGGTGCGTCCTGGATGGG
AAATAAGTGGCTTCACTTTTTCTTGCCTAGGATAGGTTAGAGGTTCTACC
TCTAGCCTTATATATATGCTGTAAAATATTTTCTTCCAATACACACAGAT
ATTATAAAGAATGTCTCAGGAGAATGTGGTAATTAGTTTTGTTGGGCAAA
AGATATCCAATCTGTGTTGGTGCACAAAGCGGGATGGTTCAACAAGCCAA
GATGAGTTTCTGACAGGTGGTTACGACGATGAGGTGAATTCCCTTTGTTT
GTGGAAAATCCCTGATGAAGCGATGGATATCTCAACAGAACCCTTTGTTG
TAGCACAGAAAGAGGTCCCAATAGGTTAGTCTATCTTTTGGTCCAGTTTC
TATTTTAGAAGCTTGTGTCTTGTATACACCTGTCAATTCCTGAGAAGATG
ATTTTCTCATAGGTCAAAGATTTTTGACAAAGCTCCTTTGTGGTAAATTT
TAACCCAGTCTCCTCACCCTTAAATGGAACTTCGTAAAATTTTTCCTTTT
TTAGTTCGTCAGATCTGGTGATATGAATCACTCTGATATGAATATTTCTT
TCTCACATGCATACCTCTTCTTCTAAAATTCAAATTGATGAGCTAGAAAG
AGGGGTTTTAACAGATCGCCCTTTCTGCACCTGGACTGGGTTTAACTATG
TCACTGCTTCATAGCTTCAAAAAAGATGTTGTTTATTACTTAGAAATCAC
AACAAAGGATAGTAGAGTGACTATTCTTACATGATACAACAACAAACTAT
TTCTTGGATTTGAGCGTTCTAAAAATTGCAAGTCTTCTTCTAAAGATTGC
NGAGTGAATGTTCTTATATGATACAACAACAAACTATTTCTTGGATTTGA
GCGTTCTAAAGATTGCAAGTCTTCAGATAATTATCAGGACTTTGCCAGAT
AAAAGCCCTGAGAGTTCGTAGTAAATGTTTGTTCTGTCTTTAAGGTGCTG
GTTTTGTGATAATCTTACACTTACTTGAAAGGTTTTATTTTCATATAAGT
GCTTTATACCAGGCACATGTTTCATATCAGGACAGTGTCTGCCTATTGTC
ATATCAGCATAATATGTAAGCAAAAAAATTTTTTTTCCTCTTTCTGACCA
ATCTTGCTCCACATCCGTGTCAGTTCAATATCAAAAAGCTTGTAAATTAA
AATTGACGAGTAAGCAAACGATATCATATCTACAAACAAAACCTTTAAAT
ATGTGCAACTTACTTATTACTTGAGATAAGTTTTCTCACTTTTGACTGAA
TTTTCTGTCGACTAGAAAAAAAAATTTTTCATTCTCAAAAGTTTTGAAAG
ATTTTGAAGTCTTAAAATCATCCGCTTAAGGTTATCTTTTCAACGAGATT
AAATATATTTTTTCTCCTTTGAAAGGAATTTTTCAAAATGTGCAAACTGC
CAATATTTTTGGAACAGACTTTAGTACAAGAGAAACAATTTCAACAGAAG
AGGTCTTTTATAATGAGGTCTATATTTCTTTGCAGGTTCAGTGACAGGAA
TCAAACAAACCTCATCATCCACAGTCTTCTACACTACCAACACTGGAAGT
CTGACACTTCTAGATTTTGATATCCACACTAATACGTTTGTAGACAGACA
GTGTTGGAATAAACTCCATCGTTATGATGTCACTGATGAGTTGGCTCCTT
GTTGTACCTTTGATGTCAGTGGACAGGAGATTATTACAGGTATCATATTA
CTTTCACTAATCAAGGAAAATCATATTTACTGTTTTTTTTAGATTGCTAA
TTTTTTCATCGGTTCAAGTAAAGTGTATAATCTTTAACCAGACTTCAAAA
ACAAAAATTCCTTGACATTCTTATAAACTCAATATTAAGAACAGACGTCA
ATTTACTTTTCAAATCTAAGTTGCTTTTTCAAATAAACCTTTTTAAGCTT
TAATACGGTAACTTTCTTCCGGCTTTAAATTTGATTATTTTTTTAACCGG
TAGGTGGTGAAGATGGTCGAATGAATATCTTACACATTGATCGTAAAGAC
CCTATCTACACTATGGACGTGATGGATAGTTCCAATGTGACAGGAATCCA
ATACATTACTTCCAAGGAATTCCTTTCAATCAACTCCACTGGACAACTCA
AAATCTGGGATACACGAAAACTTGCCAAGGACAATAAACCATCTAAAACG
TTGACACTTTCAGGCAATGCATGTCCTTTACTGTCAGTAGACAAGCACCC
GAACCAACCACATATTGTGGTAACGGGGCACGGTGACGGAGTTATTGGTA
TATGGGATACGCGTCAAGAAAAAGCTCCAGTAACACTCATTGATGCTCAT
TCAGCAGAGGTTTGGCAAGTAAAATTCCATCCAATGTATCCGGACAATTT
GTTTACTTGCTCAGAAGATGGTTCCTGCTGGTTTTGGGGTGGCTCTTCCA
TGATTTCAGGTGCTAACCAGGTCAAGACTTTATCTGAAACTGGCCTTGGT
GGAGGTTTATCATTTCACCAGCAGAATATGATGGATGCTGTTTCATCCAG
TATCTGGCTGTACGTGGATGCCAATAAGCATAAAATGGAAACTTTCTCTT
TGGTTCCCTTCAACCAGAGTGCTGTCAATACTTTCGATGTGAACGCTTCT
CGATTGATATGTGGAACGGATAATGAGGCCATCATTTGTGTCAATGATAT
TCCTCTACACTAGCTTTTGTATAATTAGCGTCTCTAGAGTTCGGTTCTCC
CTCTTATCATGTTACGTTTAAAGTTTATCTGAAACTTTCGATGTAGAATT
ATCGCCCGGATCATTCATCAGCTTTTACTATTCTAGCTGTTTTCAAAGAA
TTTAACTTATAGAAACATTAAAAGACCTTCCTACGCTTTTTAAAAGGAAT
TAGATAACAGGAACCGGGAAAATATATATATTTTTGTAAATAGCATGCAA
ACACATCAACCAATGAACAAAAGAAGAACAATCATGGTTTTATATTGAAA
TAAACTCTAACTAATGTCAACCTATACTAATCAAATACATGCCAACTGTT
TGAATACAATGGAACTCTCATAACTTTAAATATTATTACAGTGTTACCAA
ATAACCTCTTCTTACACTTTTGCTAATTTTAACTCTAAATTTCTTTTCCA
TTTTAGAAGATTAAAAATTAAAAAATACATTGATAATTATGACAATGGAG
ACTGGCAAAGAGAAATCGTCGAAAAGTCAGCTGAAGCAAAAACAGCGTAA
TGCGAAGAAATATCATAAGAAAGCAACCAATCTATTGAAAGAGTTCGAGG
GCCTAAATATAACGTCCACGCCCTCGGTTTGTTTGTTCATCGGCAATGGC
GGTATGTTGTGTGGTCAAACACGAGAAAATCTGTTGGAACTTTTCACGTC
TTACGGAGTTGTGGCTGATCTGGTAATGTTACCGAAGAAATCCTTTGCGT
TGGTACAAATGCAGTCGATCGTTTGCGCTGAAAAAGCTGTCAATGCACTC
GAAGGTCACATTCTAAACAATTGTGATAACGTGAAACAACCAACAAGCGT
TCCCCTTTACTTCCAGTATTTAGATACACCTGACTTGCACTTCTTGAGAA
AGAGTGCTGAGAACGAGAGCTATCCAGACGAAGATGTAGGTGAAGGGCTG
ATTGAGGGATTGGAGATCTATCGAGAATTCATTGATGAAGAATATGAAAA
AGACTTATTCGATTTCTTTCACCGGCAATGTTGTGACCAAGAAGGTAAAA
TCAAACGTGATTCAGATTCTGCTAAATCTACTCTCATTTCACTCATATTT
GTCGTGTTGTTTTTCAAGTTTGATTTTTTGTCCAAGCAACCCTTAAATCA
CCATGCTCTTATCTGAGCTTATACTTTTGAAAAACCACGTCTATAATTTG
NAAAAATTTTGATTTTTAGTGGGGGGAACCAACCCAGGAGGACACTATGG
TTGTTTTTCAAGTTTGAATTTTTGTCCAAACAGCCAAGCATATACTTTTG
AAAACCACGTGTATAATTTTTAGAATCGACGGATATTGATTTGATTGGTA
CATTTTTGCTTATTATTTCAACTTTTTACGTTTTAAATTTTCTTTTCTTC
CAGCCGGTGAAAATGTGCTTAAACATCGCAGTGTTTTGCATTACGGCTAT
AAATTCCTTTATGGAAGCAACAATATTGATAAAGAGAAACCGATGGATGA
AGGGATACCACGAATCTGCCAACAATTACTGGACAAGATGCTGGCTGATG
GTCTCATACACGAACTTCCTGATCAACTCACCATAAACCAATATCGACCT
GGACAAGGTCCATTTTTACAATAGATGAGAATGTTTTATGTTATTGTATT
TAACAAAGAATCAAGAGTTTCTGATGAATACATGTTCAATATTATATCAG
TAGTAATTGCCAGTTTTGAGGTTTTGACGAACGGTCTCGCTTTACGTTTT
GTAGATATCCTTGATATCCGATAAGGTTTTTCAGAAAAGGTAAAAAGATT
TGGCTGCAGACATATACAATTCCATGACGGGGTGACTTTTAACAAAACAT
GTTCATTTCTTCAGGTATTCCGCCACATGTGGACACCCATTCCGCCTTCC
AAGATGGAATATTTTCGCTCACACTAAATTCACCGGTAAATTATCGTCGC
ATATCCCTTTGTTTTGCTTATCAACCTGAATATTCCTCTCTTTAGAAAAG
TTGTGATATCTTGCCATGTTGAACCCAGTTGATTCCCCAAAACAAGTTTT
TATTGTACATAGTTATTTCCCGAGGGACCTTTTCGAGACACTTGAATGCC
ATGCGTTAGCCTACTTATAAATTAAATTATACCGTATTATTTATATATAT
AGGTTTGGTTGGACGCGCAAAATATTTTACTTTATTCATCTTATTATATA
CCTTATGATTTCATTTCACGTTCAGGTATCGATGGACTTTACAAACCCAG
AAGGACGAACGAAGTCAGTTTCTCTTGCACGGCGAAGTTTGCTTGCAATG
AAAGGAGAGTCCAGATATTTGTGGTCTCATGGGTAAGAGAATAATTATTG
CCAAAAACAAGATTTCTTTGTAGTAATTTCATACTTTGTTCTATGATATC
TTGTATTCCTTCTTATTCATGATATGGACCACTGCAATGACTTCACGAAA
TTATGCAACTTTTCTGATTTTTTTTTCACCCAACACGTCACTTTTTCTAT
TGTTTAAGTGACGTATTGGGTGGAAAATTTTGAAAAAGTTCTCAGAAGAC
TCTCCCAGTGGTGCATATCATGAATTCTATTTTTTTTATAGCCTAGCAAG
CTAGACGACTAATTCAGACATATTAGAAATAAAGCAAAAAAGTAAATTTT
AGTCGTCTAGAAACCTTTGTGCACTAACTCCAAACAAAAAAAAAGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTAAAAATGTTTCATTTGAGTTGATTTTATTTTGAGAGTTTG
TTGTTGCTTGATAAATTGTTTTCTCGCTACGCAAGTTTCTGCGTAGCTAG
GCCCGGTATCTATAAGGCTGGAACACCGGATTCTTCCAGTCGTTTATACA
TACTAAATCCCGTATCATTATTTGTGTTTATTATTAGTATTACATGCATT
ATAAACGACTCCAGTCTATTTTTTTTACGACATTGTCTCAAGGTCATTAT
TTTGAATTTGGGCTGGTTGTTTTATAAACCTTAAAATGATTACTTGTGTA
TTTTGACTTCTTACCTCATAGAATAACACCTCGGAAGTACGATATTGTAT
TTTGTAAAGATCCTACCCAAAATACCGAAGATGAAAATGCAAAACATTTA
ACGATGCGCGAACGTGGTATACGGATATCATTGACGTTCCGCAAAATATT
ACGCGGTGAATGTCGATGTGCTTTTTCAACAAAATGCGATTCGCAGAACG
ATGACGTCACCAAGAAAACATGGGCTGTACCTTTGTCTCAAAAGGAGGCT
AGTTCCCTCGAAGACGAACTTGTTTACAAAGTCTATGATGAAATCGCAGA
ACATTTTAGTGACACGCGTCATTCCCCTTGGCCACGTGTTAAGAAGTTTT
TGTGTAATTTACCGAACGGAAGTATCGTAGCAGATGTTGGGTGTGGTAAT
GGGAAATATTTGGGCGTCAATAACCAGTTGATGATGATGGGATCGGATCG
AAGTGTGAACTTGGCAAGCATTTGCGAAGAACGAGGACATCAAATCATGG
TGTCCGATTGCTTGACTTTACCATACAGGTCAGTAAAATATTGTCCTGTA
GAAAGGGTACTACTACCTTAGCAAAGTTAACCACGATGAATGGTTTATTA
GGGTTTGGCACCATTTTCGCCAGTCTTTTGTTGGACCTACCTCCGGGTAC
CCCGGTGGAGGTTCTATAAATTAACCCATGTCCGTTCGTTCGTTCGTTCG
TTCGTCCGTCTGTTACCAGCTTTTTTCAGGATTGGCTCATTAGTTTTTTC
TGATTTTTTGCACAATGATGCAAAATGGCAATGTCCAGAACGTGACGGAG
CCCGATTTTTGAGAAAAAAATTATTTGGGCAAATTTGGGCCAAAAACTAC
CTAAAAATAGGGTTTTTTGGACTTTGTGCAAAATCCTGTCATTACTTTTT
CCTGATTTTTTATACGAAGATGGAGGGCAAGATTCTCTAAAGAATGGCTG
AAGTGGTTTTTCCCGGAAAATTCTTATTAGCCTTAAAAAACGGATTTTCG
TATTTTGGGGAAATTCCCTTTAACCAAATAAGAAAATATAGCTTTTTTCA
AAGTTGACTCGTTATTTTTTTCTGATTTTTTGCACAATGATGCAAAATGG
CAATGCCTAAAATGTGACGGAGCCCGATTTTCGAAAAAGAATATATTTGG
GCAAATTTGGGCCAAAAACTGCCTAAAAATAGGGTTTTTTGGACTTTGTG
CAAAATCCTGTCATTACTTTTTTCTGATTTTTTGTACAAAGATGGAGGGC
AAGATTCGCTATAAGAAAATATAGCTTTTCTCAATGTTGACTCATAATTT
CTTTCTGATTTTTTGCACAATGATGCAAAATGGCAATGCCCAAAATGTGA
CGGAGCCAGATTTTTAAGGAAAATTTTTTTGGGCAAATTTGGGCCAAAAA
CAGCTTAAAAGGTTTTTTGGGCCTGAATGGTTTAAGTGATTTTCGTATTT
GGGGAAATTCCTTTTTACCATTTTACATTATTCAACACACAAGCTTTATT
TTTCCATTCTGAATTTTTGTACAATTATTGTCACCTTAGACATATGAACA
TGTTGTCACTTTTTTCTTATTTTCGTCTGATGTTAATCATTAGGTAGGTC
CATTCAGCATGTTGCTTGTTTCCTATGTGTTGGAATGGAAGCTAGTACTA
GCGAGACACAGAATTAGTCTATAGGAAAGAGTGGGTACGAATTACCGTCA
AGTATAAAAACAGCTTTTTCCGTCAATCAGCGCAAAATCAGTTCATCAAT
AAATTGTAGAATACTTTGCTTTGACTATTGGGATTTCAAGAATGAACTAC
CTATTTCTTTCAGGTCATCTTGTTTCGATGGTTGTATTTGCATCGCGGTC
ATTCANCTATTGTGATTTCAAGAATGAACTACCTATTTCTTTCAGGTCAT
CTTGTTTCGATGGTTGTATTTGCATCGCGGTCATTCATCACCTGTCTACA
GAGCAACGTCGATTGGAAGCTATACAAGAGCTTGTTCGAATCACACGCGT
CAGAGGCTTAATCCTTGTCTACGTATGGGCGCTCGAGCAAGATACCGAGG
AAGAAAATGAAGGTGTCTTATTAGGTACTGATGGAACAAAAATATTAAAC
CCTAGCTATTCTATTGATAGTGAAAAACTAGAAGCTCTAGATTTAGAGAC
AAATAAATATTCTGTTTCAAAGGAATCGAACGATAAACAATATATCCAAA
TAGCAGAAGGTCGAAATACTTTTCAACAGCAAGATTTATTAGTACCCTGG
CATTTGAAGAATACGAACCCTTCTCGAGAGGAACATGTTTTTCATCGTTT
TTACCATGTGTTCAAAAGAGGTGAACTGGAGACATTGTGTCGTCAACTCC
CCAACGTTGAAGTGAGAGATTTGTACTTGGACTGTGGAAATTGGTGTATT
GTTTTACAAAAGGTATCTTCTTGACCTGCAGCAACCTTGTTTTATTCTTT
AGGCGGAAATAGCGGAATGATGTGTTTCCGGAATGGGTTCTTCCAGAAAA
AATTAGAATATGGAGGGCGGAGGATATAAATTTTTTTTGAAATTTATCCC
CCGAACATTTTGACTTTTGAGCCCCGGACAGCAGGTCTTACCCACAGATT
TATAAAGCCCGAAGGGCTAGATGTCGTGCTTGAAGCCATTGCACACAAAA
ATAATTGAGCATTGGAAAAAATATTGTTCATATTGTGAAAACCCGCGAAG
CTTCTGATTGGTCAAGCGTAGACTATGTTATAGTCTAAGACGAATCACTA
TCTAAGAAAAAAGCCCAAAGCCGAAGAACATTCGCAAACGGATTTTTTTA
ACGAAAAGAGTTTACAGTCGGTAGAGTTGCCAGTCTTAGACTATACGATT
TTGGCGCAAAATACAAAAACAGCCAAAATCGTATGAATTTGAGTTTCTGT
ATGCGAGGCCAGCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022578XLOC_022578Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037875-exon-sc0001729-1575043694:37403..37876TCONS_00037875-exon-sc0001729-1575043694:37403..37876Clytia hemisphaericaexon
TCONS_00037875-exon-sc0001729-1575043694:36038..36241TCONS_00037875-exon-sc0001729-1575043694:36038..36241Clytia hemisphaericaexon
TCONS_00037875-exon-sc0001729-1575043694:34033..35773TCONS_00037875-exon-sc0001729-1575043694:34033..35773Clytia hemisphaericaexon
TCONS_00037875-exon-sc0001729-1575043694:33470..33673TCONS_00037875-exon-sc0001729-1575043694:33470..33673Clytia hemisphaericaexon
TCONS_00037875-exon-sc0001729-1575043694:33142..33212TCONS_00037875-exon-sc0001729-1575043694:33142..33212Clytia hemisphaericaexon
TCONS_00037875-exon-sc0001729-1575043694:32745..32851TCONS_00037875-exon-sc0001729-1575043694:32745..32851Clytia hemisphaericaexon
TCONS_00037875-exon-sc0001729-1575043694:31399..31905TCONS_00037875-exon-sc0001729-1575043694:31399..31905Clytia hemisphaericaexon
TCONS_00037875-exon-sc0001729-1575043694:29013..30031TCONS_00037875-exon-sc0001729-1575043694:29013..30031Clytia hemisphaericaexon
TCONS_00037875-exon-sc0001729-1510915933:37403..37876TCONS_00037875-exon-sc0001729-1510915933:37403..37876Clytia hemisphaericaexon
TCONS_00037875-exon-sc0001729-1510915933:36038..36241TCONS_00037875-exon-sc0001729-1510915933:36038..36241Clytia hemisphaericaexon
TCONS_00037875-exon-sc0001729-1510915933:34033..35773TCONS_00037875-exon-sc0001729-1510915933:34033..35773Clytia hemisphaericaexon
TCONS_00037875-exon-sc0001729-1510915933:33470..33673TCONS_00037875-exon-sc0001729-1510915933:33470..33673Clytia hemisphaericaexon
TCONS_00037875-exon-sc0001729-1510915933:33142..33212TCONS_00037875-exon-sc0001729-1510915933:33142..33212Clytia hemisphaericaexon
TCONS_00037875-exon-sc0001729-1510915933:32745..32851TCONS_00037875-exon-sc0001729-1510915933:32745..32851Clytia hemisphaericaexon
TCONS_00037875-exon-sc0001729-1510915933:31399..31905TCONS_00037875-exon-sc0001729-1510915933:31399..31905Clytia hemisphaericaexon
TCONS_00037875-exon-sc0001729-1510915933:29013..30031TCONS_00037875-exon-sc0001729-1510915933:29013..30031Clytia hemisphaericaexon
TCONS_00037875-exon-sc0001729-1491911889:37403..37876TCONS_00037875-exon-sc0001729-1491911889:37403..37876Clytia hemisphaericaexon
TCONS_00037875-exon-sc0001729-1491911889:36038..36241TCONS_00037875-exon-sc0001729-1491911889:36038..36241Clytia hemisphaericaexon
TCONS_00037875-exon-sc0001729-1491911889:34033..35773TCONS_00037875-exon-sc0001729-1491911889:34033..35773Clytia hemisphaericaexon
TCONS_00037875-exon-sc0001729-1491911889:33470..33673TCONS_00037875-exon-sc0001729-1491911889:33470..33673Clytia hemisphaericaexon
TCONS_00037875-exon-sc0001729-1491911889:33142..33212TCONS_00037875-exon-sc0001729-1491911889:33142..33212Clytia hemisphaericaexon
TCONS_00037875-exon-sc0001729-1491911889:32745..32851TCONS_00037875-exon-sc0001729-1491911889:32745..32851Clytia hemisphaericaexon
TCONS_00037875-exon-sc0001729-1491911889:31399..31905TCONS_00037875-exon-sc0001729-1491911889:31399..31905Clytia hemisphaericaexon
TCONS_00037875-exon-sc0001729-1491911889:29013..30031TCONS_00037875-exon-sc0001729-1491911889:29013..30031Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001729supercontigsc0001729:29013..37876 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.20369	1.38294	1.25053	1.09052	4.80603	3.64339	3.95858	4.07245	2.3393	1.70728	2.92456	1.95602	1.50295	0.818846	1.06745	1.51408	1.20635	1.65975	0.55055	0.833171	1.03772	2.2589	1.09651	1.38227	4.63823	3.86869	0.423321	1.20708	1.99801	1.06553
Blast
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BLAST of TCONS_00037875 vs. Swiss-Prot (Human)
Match: ALKB8 (Alkylated DNA repair protein alkB homolog 8 OS=Homo sapiens GN=ALKBH8 PE=1 SV=2)

HSP 1 Score: 480.33 bits (1235), Expect = 6.434e-152
Identity = 272/662 (41.09%), Postives = 375/662 (56.65%), Query Frame = 1 
Query: 1945 KATNLLKEFEGLNITSTPSVCLFIGNGGMLCGQTRENLLELFTSYGVVADLVMLPKKSFALVQMQSIVCAEKAVNALEGHILNNCDNVKQPTSVPLYFQYLDTPDLHFLRKSAENESYPDEDVGEGLIEGLEIYREFIDEEYEKDLFDFFH-RQCCDQEAGENVLKHRSVLHYGYKFLYGSNNIDKEKPMDEGIPRICQQLLDKMLADGLIHELPDQLTINQYRPGQGIPPHVDTHSAFQDGIFSLTLNSPVSMDFTNPEGRTKSVSLARRSLLAMKGESRYLWSHGITPRKYDIVFCKDPTQN-TEDENAKHLTMRERGIRISLTFRKILRGECRCAFSTKCDSQNDDVTKKTWAVPLSQKEASSLEDELVYKVYDEIAEHFSDTRHSPWPRVKKFLCNLPNGSIVADVGCGNGKYLGVNNQLMMMGSDRSVNLASICEERGHQIMVSDCLTLPYRSSCFDGCICIAVIHHLSTEQRRLEAIQELVRITRVRGLILVYVWALEQDTEEENEGVLLGTDGTKI----LNPSYSIDSEKLEALDLETNKYSVSK--ESNDKQ------------YIQIAEGRNTFQQQDLLVPWHLKNTNPSR--------------EEHVFHRFYHVFKRGELETLCRQLPNVEVRDLYLDCGNWCIVLQKV 3828
            KA + L   EG+   S  +  L + NGG+  G +R  LL +    G+V  L+M P K ++  + ++   +++A   L G  +   D++ Q   + LY  +++      LR  A             L  GL +  E I  E EK L +     +  D +  +  LKHR V H+GY+F Y +NN+DK+KP+  G+P IC+  L+K L  G I   PDQ+TINQY PGQGIP H+DTHSAF+D I SL+L S + MDF +P+G    V L RRSLL M GESRYLW+HGIT RK+D V   +  ++     +   LT+ +RG+R S TFRK+ +  C C++   CDSQ  +      + P S KEAS LE E V++VY+EIA HFS TRH+PWP + +FL  LP+GSIVAD+GCGNGKYLG+N +L M+G DRS NL  IC ER  Q  V D L +P RS   D CI IAVIHH +T +RR+ A+QE+VR+ R  G  L+YVWA+EQ+  ++    L G   ++     +N   S+    +E +    ++ S S     ND Q             + +   R +F  QD+LVPWHLK  NP +                 VFHR+YHVF+ GELE  CR + +V +   Y D GNWC++LQK 
Sbjct:   24 KAKHTLLRHEGIETVSYATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAYVTLNGKEV--VDDLGQ--KITLYLNFVEKVQWKELRPQA-------------LPPGLMVVEEIISSEEEKMLLESVDWTEDTDNQNSQKSLKHRRVKHFGYEFHYENNNVDKDKPLSGGLPDICESFLEKWLRKGYIKHKPDQMTINQYEPGQGIPAHIDTHSAFEDEIVSLSLGSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQTPCNCSYPLVCDSQRKETPP---SFPESDKEASRLEQEYVHQVYEEIAGHFSSTRHTPWPHIVEFLKALPSGSIVADIGCGNGKYLGINKELYMIGCDRSQNLVDICRERQFQAFVCDALAVPVRSGSCDACISIAVIHHFATAERRVAALQEIVRLLRPGGKALIYVWAMEQEYNKQKSKYLRGNRNSQGKKEEMNSDTSVQRSLVEQMRDMGSRDSASSVPRINDSQEGGCNSRQVSNSKLPVHVNRTSFYSQDVLVPWHLKG-NPDKGKPVEPFGPIGSQDPSPVFHRYYHVFREGELEGACRTVSDVRILQSYYDQGNWCVILQKA 664
The following BLAST results are available for this feature:
BLAST of TCONS_00037875 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ALKB86.434e-15241.09Alkylated DNA repair protein alkB homolog 8 OS=Hom... [more]
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