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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037736 ID=TCONS_00037736|Name=TCONS_00037736|organism=Clytia hemisphaerica|type=transcript|length=1694bp
NCCTAAGATTTGTGAGCAGGCTAACCCCCACctgcttaaatttttctgaa
aacctccaacccccccctAAAGTTAGGGGGGGGTTCCCACTAtgtgccca
ccatcaagcatgtttcaattttcaatacaggtatatgtaccacaaaaccc
acaggtacctcaaaaccaacaatttcatttcaggagttctagaaaaatct
aaaatgtttttatcagcATAACTTTTTAAGATTATGTTGGCATAATAGTT
TCTTtgttatttaaaacaaaattgagcATTTTTGattgggtaaaagtttt
ttatcaagaTTTAATGCTAGAAATctaacttcaaaatttttgaatttttt
caaaaaatggtcagataAGTCAGTTGCTATTGACTAACCTATCaatcttt
cgttttctattACCTCTAGGCATAACACAAATATAGGAAAAAAGTCCTAA
GTGCTGTAAGCAATGTGTTTATTTTAATTGCTCTCAAAAAACTCACTTTT
TAattgtgggttttgaggtacatatgagaaaaattgcaagttttagaatt
ttttgatgttgaacacaaaaatatttatctatttctCAAACATACTTCtg
gaatacaattttgtgaaacattttcaagaaaagcTATTCAAAAATACAAC
AATAATGTTTAGCATATCACTTTTACTAAAGCTAAACGGTTTAGTCCTGA
TACTTTGttaaacatattttcaattaaatcaTAATCtggaatgttcattt
ttttcctcgAATGGGAATGACCTTTAATGGCTCAGCTATGATGTCATGAA
CTGGGAAAATGCTTATATCTGGAAGACGGTCTGGGGTGTTTTCAAGAACA
GTGCCACTCCTAACTTTAGGCTTTAGACAGTGTAACTGAATTGAGTCAAC
AGCGCCATCTTCATCTTTTAAGAATCTCTTCAACAAACGACCAATATaca
acctttttgttttcttggtgGTGTAGATGGCGGTATACCTTGTCTCTTTT
GTTCGCGGTGTCAGGCCTTTCCAGCAATTCTTGAGTTTTTGGATGTCGCT
TTCATCATCAGTTTCATCTTCGGACATTTCGCTTCCTTTAGATTCAAATT
CCTCACCTTCCTCATCTGATGACGAATCCTCCGCAAACAATCGTTTGGAG
ATTGAATGTTGTTTGGTTGGTAATATCATCAGTGGTTTGATTCCATTAAC
TTTATAGCTTGCTTTGCTGCAAACTGAACGAAGTACATAGACATACTGGG
AACTGCTTTAATCCCGAAGCGAAGCATTTTTGTCGTAAACAGATACATTA
AGTTTTTGCATTTGATGAATGTTTCTCTGATCTCCcctctcttcttcttt
ttcagtttacttcttcattttctcatccctgatttctttttgaCCTTGGT
TACTACATCTTTAGCCCCTCATTGAGTCGTGTACCTGAGTCACCCTTGTA
GTTGTGGTTGctttcttttcttcatttggcttaaccttttttattgtcag
aaggccaggaattTCCTCCAGTTGGATGCTTCTTTCTGCCATCTCCATTA
TCAGGGACTGAACCTGGTCAAATTTAGCCTTCCAATAATCACAAgaacct
tttcttttgtcaGAAGGAGACATGATGAGTGATGAGTCTGGAGTCGATGT
AGATGTTGATGGAGGGATTTCTTCTTGTATACATGCTACTGCNN Run BLAST on NCBI transcript from alignment at sc0001702:23381..25074- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037736 ID=TCONS_00037736|Name=TCONS_00037736|organism=Clytia hemisphaerica|type=transcript|length=1694bp|location=Sequence derived from alignment at sc0001702:23381..25074- (Clytia hemisphaerica)
NCCTAAGATTTGTGAGCAGGCTAACCCCCACCTGCTTAAATTTTTCTGAA
AACCTCCAACCCCCCCCTAAAGTTAGGGGGGGGTTCCCACTATGTGCCCA
CCATCAAGCATGTTTCAATTTTCAATACAGGTATATGTACCACAAAACCC
ACAGGTACCTCAAAACCAACAATTTCATTTCAGGAGTTCTAGAAAAATCT
AAAATGTTTTTATCAGCATAACTTTTTAAGATTATGTTGGCATAATAGTT
TCTTTGTTATTTAAAACAAAATTGAGCATTTTTGATTGGGTAAAAGTTTT
TTATCAAGATTTAATGCTAGAAATCTAACTTCAAAATTTTTGAATTTTTT
CAAAAAATGGTCAGATAAGTCAGTTGCTATTGACTAACCTATCAATCTTT
CGTTTTCTATTACCTCTAGGCATAACACAAATATAGGAAAAAAGTCCTAA
GTGCTGTAAGCAATGTGTTTATTTTAATTGCTCTCAAAAAACTCACTTTT
TAATTGTGGGTTTTGAGGTACATATGAGAAAAATTGCAAGTTTTAGAATT
TTTTGATGTTGAACACAAAAATATTTATCTATTTCTCAAACATACTTCTG
GAATACAATTTTGTGAAACATTTTCAAGAAAAGCTATTCAAAAATACAAC
AATAATGTTTAGCATATCACTTTTACTAAAGCTAAACGGTTTAGTCCTGA
TACTTTGTTAAACATATTTTCAATTAAATCATAATCTGGAATGTTCATTT
TTTTCCTCGAATGGGAATGACCTTTAATGGCTCAGCTATGATGTCATGAA
CTGGGAAAATGCTTATATCTGGAAGACGGTCTGGGGTGTTTTCAAGAACA
GTGCCACTCCTAACTTTAGGCTTTAGACAGTGTAACTGAATTGAGTCAAC
AGCGCCATCTTCATCTTTTAAGAATCTCTTCAACAAACGACCAATATACA
ACCTTTTTGTTTTCTTGGTGGTGTAGATGGCGGTATACCTTGTCTCTTTT
GTTCGCGGTGTCAGGCCTTTCCAGCAATTCTTGAGTTTTTGGATGTCGCT
TTCATCATCAGTTTCATCTTCGGACATTTCGCTTCCTTTAGATTCAAATT
CCTCACCTTCCTCATCTGATGACGAATCCTCCGCAAACAATCGTTTGGAG
ATTGAATGTTGTTTGGTTGGTAATATCATCAGTGGTTTGATTCCATTAAC
TTTATAGCTTGCTTTGCTGCAAACTGAACGAAGTACATAGACATACTGGG
AACTGCTTTAATCCCGAAGCGAAGCATTTTTGTCGTAAACAGATACATTA
AGTTTTTGCATTTGATGAATGTTTCTCTGATCTCCCCTCTCTTCTTCTTT
TTCAGTTTACTTCTTCATTTTCTCATCCCTGATTTCTTTTTGACCTTGGT
TACTACATCTTTAGCCCCTCATTGAGTCGTGTACCTGAGTCACCCTTGTA
GTTGTGGTTGCTTTCTTTTCTTCATTTGGCTTAACCTTTTTTATTGTCAG
AAGGCCAGGAATTTCCTCCAGTTGGATGCTTCTTTCTGCCATCTCCATTA
TCAGGGACTGAACCTGGTCAAATTTAGCCTTCCAATAATCACAAGAACCT
TTTCTTTTGTCAGAAGGAGACATGATGAGTGATGAGTCTGGAGTCGATGT
AGATGTTGATGGAGGGATTTCTTCTTGTATACATGCTACTGCNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037736-exon-sc0001702-1575043694:23381..25074 | TCONS_00037736-exon-sc0001702-1575043694:23381..25074 | Clytia hemisphaerica | exon |
| TCONS_00037736-exon-sc0001702-1510915933:23381..25074 | TCONS_00037736-exon-sc0001702-1510915933:23381..25074 | Clytia hemisphaerica | exon |
| TCONS_00037736-exon-sc0001702-1491911889:23381..25074 | TCONS_00037736-exon-sc0001702-1491911889:23381..25074 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001702 | supercontig | sc0001702:23381..25074 - |
Blast
The following BLAST results are available for this feature:
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