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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037732 ID=TCONS_00037732|Name=TCONS_00037732|organism=Clytia hemisphaerica|type=transcript|length=1403bp
GTGCTAcctctttcacaaaaaaaatggaCAGTGTTGATATGCATTTGCAA
GAGGaatgtgacatttacaaaactacttttttatCACCTCAAAAGAATGA
AAGCACCAGCGCAATTAGGAAACGAAGAAAAATTATGCGAagtgaaataa
aagaaaaaaagttgtgTAAATTTCCaatgaaactgaaaaagaacTTGCTT
GATAGACCAGTCATAAAAATAACGTTCCCAAATAAACCTCAGGGTAAAAC
actatttaaaaatattgattttcaacgCATCGTTATCCCTTCTGCaactt
ttaaagataaaaaatcCTCAAAAGAAACAACATATAAGAACAAATcgaaa
attggaaaagtttcaaataagaaaaagataaaTCCAGACAGGTTAATGAA
AGGTCTTactcaaaataattcaaaattatcACACACTTCTATGAACATCA
ATACTAATCGACAACCTTCTGACAACAATAACATTCCATTGAATAATCAG
AATGATCATGAGATGAATGAAGAACCACGTGTGAACGAAACAAATATTCA
ATTGAGTGACCATCATCATGGTCACCTTAACATCCATGAAAATACATTTG
TAAAAGAAGCTGTATCAAACTTCATCAAAGGGGAAGATAAGCATTCTATA
GCTAGATGTATCACATGCCAAGAAGTCAGGCCAGTCTTCTTTTCCCATGT
CCCTAAGAAGAAGGTGGATAAGTGGCAAGTAGAAGATCAAAGATGCACTA
GGTGTAAAGATGAATTTAATCAgaaacaaaatcgaaaaaaaaatcatgcg
CTACTTTTTTCAGGGATTCATTCACCTCCCACTGATTGCTTCTGTGACAA
TGAGGGAAATCTGTTGCATAATAATCAACACTTTGCCAACACACCCTCTT
TTCTCCAAGGCCTTACTTTTGTCGAAACATTGTTAATTCGCAAAATATCC
ATTGCAATCTATGTTCATTGTTTAAAGTACGGAATGTTGGCCTCAAAGGG
CCATGCAGTTGCCATACCTTCAAATTTAAAGATATTCACCAAATTGCCTC
AATTACCATCTGAAATTGGCATCATCTTGATAAGAAGTGGTAGCAATAAT
TCAAAAGCTTACATGGCCTCCCGACACAGGGTACAAAAAGCTCTTAACGG
TTTGGTTTTTGGTATCCCTGCTTTTGGACTGGATAATCCACAACCTGGAT
ATTCTCAATATAAaggaaaaaatcacatttctgggaaaattttgaaagga
aaatattttttgcatgaGCCCAATCCATATTATCATGATGTAATTATTGA
GCAGAATCGCCTTTTAAACATTCCTGAAGATGCTGGAATTATACCagggc
ttccaatagtttctgCTAATAAGttcaataatgaaaataaaaatgaagat
aaa Run BLAST on NCBI protein sequence of TCONS_00037732-protein >TCONS_00037732-protein ID=TCONS_00037732-protein|Name=TCONS_00037732-protein|organism=Clytia hemisphaerica|type=polypeptide|length=467bp
ATSFTKKMDSVDMHLQEECDIYKTTFLSPQKNESTSAIRKRRKIMRSEIK
EKKLCKFPMKLKKNLLDRPVIKITFPNKPQGKTLFKNIDFQRIVIPSATF
KDKKSSKETTYKNKSKIGKVSNKKKINPDRLMKGLTQNNSKLSHTSMNIN
TNRQPSDNNNIPLNNQNDHEMNEEPRVNETNIQLSDHHHGHLNIHENTFV
KEAVSNFIKGEDKHSIARCITCQEVRPVFFSHVPKKKVDKWQVEDQRCTR
CKDEFNQKQNRKKNHALLFSGIHSPPTDCFCDNEGNLLHNNQHFANTPSF
LQGLTFVETLLIRKISIAIYVHCLKYGMLASKGHAVAIPSNLKIFTKLPQ
LPSEIGIILIRSGSNNSKAYMASRHRVQKALNGLVFGIPAFGLDNPQPGY
SQYKGKNHISGKILKGKYFLHEPNPYYHDVIIEQNRLLNIPEDAGIIPGL
PIVSANKFNNENKNEDK Run BLAST on NCBI transcript from alignment at sc0001701:32323..33725 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037732 ID=TCONS_00037732|Name=TCONS_00037732|organism=Clytia hemisphaerica|type=transcript|length=1403bp|location=Sequence derived from alignment at sc0001701:32323..33725 (Clytia hemisphaerica)
tttatcttcatttttattttcattattgaaCTTATTAGcagaaactattg
gaagccctGGTATAATTCCAGCATCTTCAGGAATGTTTAAAAGGCGATTC
TGCTCAATAATTACATCATGATAATATGGATTGGGCtcatgcaaaaaata
ttttcctttcaaaattttcccagaaatgtgattttttcctTTATATTGAG
AATATCCAGGTTGTGGATTATCCAGTCCAAAAGCAGGGATACCAAAAACC
AAACCGTTAAGAGCTTTTTGTACCCTGTGTCGGGAGGCCATGTAAGCTTT
TGAATTATTGCTACCACTTCTTATCAAGATGATGCCAATTTCAGATGGTA
ATTGAGGCAATTTGGTGAATATCTTTAAATTTGAAGGTATGGCAACTGCA
TGGCCCTTTGAGGCCAACATTCCGTACTTTAAACAATGAACATAGATTGC
AATGGATATTTTGCGAATTAACAATGTTTCGACAAAAGTAAGGCCTTGGA
GAAAAGAGGGTGTGTTGGCAAAGTGTTGATTATTATGCAACAGATTTCCC
TCATTGTCACAGAAGCAATCAGTGGGAGGTGAATGAATCCCTGAAAAAAG
TAGcgcatgatttttttttcgattttgtttcTGATTAAATTCATCTTTAC
ACCTAGTGCATCTTTGATCTTCTACTTGCCACTTATCCACCTTCTTCTTA
GGGACATGGGAAAAGAAGACTGGCCTGACTTCTTGGCATGTGATACATCT
AGCTATAGAATGCTTATCTTCCCCTTTGATGAAGTTTGATACAGCTTCTT
TTACAAATGTATTTTCATGGATGTTAAGGTGACCATGATGATGGTCACTC
AATTGAATATTTGTTTCGTTCACACGTGGTTCTTCATTCATCTCATGATC
ATTCTGATTATTCAATGGAATGTTATTGTTGTCAGAAGGTTGTCGATTAG
TATTGATGTTCATAGAAGTGTGTgataattttgaattattttgagtAAGA
CCTTTCATTAACCTGTCTGGAtttatctttttcttatttgaaacttttcc
aattttcgATTTGTTCTTATATGTTGTTTCTTTTGAGgattttttatctt
taaaagttGCAGAAGGGATAACGATGcgttgaaaatcaatatttttaaat
agtGTTTTACCCTGAGGTTTATTTGGGAACGTTATTTTTATGACTGGTCT
ATCAAGCAAgttctttttcagtttcattGGAAATTTAcacaacttttttt
cttttatttcactTCGCATAATTTTTCTTCGTTTCCTAATTGCGCTGGTG
CTTTCATTCTTTTGAGGTGataaaaaagtagttttgtaaatgtcacattC
CTCTTGCAAATGCATATCAACACTGtccattttttttgtgaaagaggTAG
CAC Coding sequence (CDS) from alignment at sc0001701:32323..33725 >TCONS_00037732 ID=TCONS_00037732|Name=TCONS_00037732|organism=Clytia hemisphaerica|type=CDS|length=1401bp|location=Sequence derived from alignment at sc0001701:32323..33725 (Clytia hemisphaerica)
tttatcttcatttttattttcattattgaaCTTATTAGcagaaactattg
gaagccctGGTATAATTCCAGCATCTTCAGGAATGTTTAAAAGGCGATTC
TGCTCAATAATTACATCATGATAATATGGATTGGGCtcatgcaaaaaata
ttttcctttcaaaattttcccagaaatgtgattttttcctTTATATTGAG
AATATCCAGGTTGTGGATTATCCAGTCCAAAAGCAGGGATACCAAAAACC
AAACCGTTAAGAGCTTTTTGTACCCTGTGTCGGGAGGCCATGTAAGCTTT
TGAATTATTGCTACCACTTCTTATCAAGATGATGCCAATTTCAGATGGTA
ATTGAGGCAATTTGGTGAATATCTTTAAATTTGAAGGTATGGCAACTGCA
TGGCCCTTTGAGGCCAACATTCCGTACTTTAAACAATGAACATAGATTGC
AATGGATATTTTGCGAATTAACAATGTTTCGACAAAAGTAAGGCCTTGGA
GAAAAGAGGGTGTGTTGGCAAAGTGTTGATTATTATGCAACAGATTTCCC
TCATTGTCACAGAAGCAATCAGTGGGAGGTGAATGAATCCCTGAAAAAAG
TAGcgcatgatttttttttcgattttgtttcTGATTAAATTCATCTTTAC
ACCTAGTGCATCTTTGATCTTCTACTTGCCACTTATCCACCTTCTTCTTA
GGGACATGGGAAAAGAAGACTGGCCTGACTTCTTGGCATGTGATACATCT
AGCTATAGAATGCTTATCTTCCCCTTTGATGAAGTTTGATACAGCTTCTT
TTACAAATGTATTTTCATGGATGTTAAGGTGACCATGATGATGGTCACTC
AATTGAATATTTGTTTCGTTCACACGTGGTTCTTCATTCATCTCATGATC
ATTCTGATTATTCAATGGAATGTTATTGTTGTCAGAAGGTTGTCGATTAG
TATTGATGTTCATAGAAGTGTGTgataattttgaattattttgagtAAGA
CCTTTCATTAACCTGTCTGGAtttatctttttcttatttgaaacttttcc
aattttcgATTTGTTCTTATATGTTGTTTCTTTTGAGgattttttatctt
taaaagttGCAGAAGGGATAACGATGcgttgaaaatcaatatttttaaat
agtGTTTTACCCTGAGGTTTATTTGGGAACGTTATTTTTATGACTGGTCT
ATCAAGCAAgttctttttcagtttcattGGAAATTTAcacaacttttttt
cttttatttcactTCGCATAATTTTTCTTCGTTTCCTAATTGCGCTGGTG
CTTTCATTCTTTTGAGGTGataaaaaagtagttttgtaaatgtcacattC
CTCTTGCAAATGCATATCAACACTGtccattttttttgtgaaagaggTAG
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037732-exon-sc0001701-1491911889:32323..33725 | TCONS_00037732-exon-sc0001701-1491911889:32323..33725 | Clytia hemisphaerica | exon |
| TCONS_00037732-exon-sc0001701-1510915933:32323..33725 | TCONS_00037732-exon-sc0001701-1510915933:32323..33725 | Clytia hemisphaerica | exon |
| TCONS_00037732-exon-sc0001701-1575043694:32323..33725 | TCONS_00037732-exon-sc0001701-1575043694:32323..33725 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001701 | supercontig | sc0001701:32323..33725 . |
Blast
The following BLAST results are available for this feature:
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