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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037731 ID=TCONS_00037731|Name=TCONS_00037731|organism=Clytia hemisphaerica|type=transcript|length=1244bp
CTGGGTATTGTTGTAAAGGTAACAAATCTACACAAGACCTTATGGATATA
TACAAGGAAATACTGAATAAATCTGATCCAACAATATCTCTGAAATCTAT
CGCTcaaaaactgcttttgaaaacaGTTGGTTTTGTTGATACTCCATCTT
CAGCTGCTGATTACATCAATACTAAAGGTAAACTATACAGCTGCAGCAGG
AGATTTAAAAGAATTGGTTTAAGTGGTTTCAGGCTTTTTGATCCTAATGG
TAAAGATGGCAAAGTTACCAAAGATACCATcgttgacaaatttctttcag
atAAAAGAAGGGAAGAAAATCCCTATATTACTTTGTACGACTGGGCAAAA
AAGTGCGATTGTGGAAAGAAGTCACCCTGTAACAAAGATCATGTTCCTGT
ATTTACAGGATGTCAGCGCTTTTGGATATGGCCAGCAGGTGaagattttt
ctaaagaactATTAATGAAATTCTCTCCTGGTACTTGGAGAAAAGTTGAT
GATTTGAAAAATGGATTTGATACATACACAGAATCATTTGCTCAATTTCT
GGACTCTGACTATTGCCCTGAATCTGTGAGAATGATGCTGCAGTTTGCCA
AGGCTGAATATGACAAAAAAGTTGCTAGACGCCAAAAGAGACAAAACAAT
CAGCCGAATCAACCAATAGAAGAAATAAATTTCTCTCAATCAACACTTGA
AGGAAGTCAAGATAGTCAATCTTCACAAGGCTCTGTCGTTGATACAATGG
GAAACCAACTCCTTAGAGATATTGCGAGAGAAAATAGAGTATCAATTGAA
GAAGCTTCTGTTGATGAGGAAGTGCTATACAATGGTGGAGATGATTATGA
CTGGCACGCAAATGGCTTGATGTGGTTGGGTGTACAATCCTTTCCTGACA
CACTTATAGAAGAAACAAAGAATTGGCTATCCGATGTATCAAAGCAAGCA
AATGAAGCATTTGAGAGGGAAGGTAGACTTTGTACATTGCCAGATGTTGA
CCCAAAATTAGTAAATCCAATCCAAATGCTAATTGTCAACTACAATATTC
AACTTCTTTTGGATTATGCGAGAGGAAATTTTGCTGTAGGATATGAACAT
TGCAAACGACTAATTGTTCAAGGCTGTGCGGGTACANGAATCCAATCCAA
ATGTTAATTGTCAACTACAATATTCAACTTCTTTTGGATTATGCGAGAGG
AAATTTTGCTGTAGGATATGAACATTGCAAACGACTAATTGTTC Run BLAST on NCBI protein sequence of TCONS_00037731-protein >TCONS_00037731-protein ID=TCONS_00037731-protein|Name=TCONS_00037731-protein|organism=Clytia hemisphaerica|type=polypeptide|length=384bp
GYCCKGNKSTQDLMDIYKEILNKSDPTISLKSIAQKLLLKTVGFVDTPSS
AADYINTKGKLYSCSRRFKRIGLSGFRLFDPNGKDGKVTKDTIVDKFLSD
KRREENPYITLYDWAKKCDCGKKSPCNKDHVPVFTGCQRFWIWPAGEDFS
KELLMKFSPGTWRKVDDLKNGFDTYTESFAQFLDSDYCPESVRMMLQFAK
AEYDKKVARRQKRQNNQPNQPIEEINFSQSTLEGSQDSQSSQGSVVDTMG
NQLLRDIARENRVSIEEASVDEEVLYNGGDDYDWHANGLMWLGVQSFPDT
LIEETKNWLSDVSKQANEAFEREGRLCTLPDVDPKLVNPIQMLIVNYNIQ
LLLDYARGNFAVGYEHCKRLIVQGCAGTXIQSKC Run BLAST on NCBI transcript from alignment at sc0001701:29411..30654 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037731 ID=TCONS_00037731|Name=TCONS_00037731|organism=Clytia hemisphaerica|type=transcript|length=1244bp|location=Sequence derived from alignment at sc0001701:29411..30654 (Clytia hemisphaerica)
GAACAATTAGTCGTTTGCAATGTTCATATCCTACAGCAAAATTTCCTCTC
GCATAATCCAAAAGAAGTTGAATATTGTAGTTGACAATTAACATTTGGAT
TGGATTCNTGTACCCGCACAGCCTTGAACAATTAGTCGTTTGCAATGTTC
ATATCCTACAGCAAAATTTCCTCTCGCATAATCCAAAAGAAGTTGAATAT
TGTAGTTGACAATTAGCATTTGGATTGGATTTACTAATTTTGGGTCAACA
TCTGGCAATGTACAAAGTCTACCTTCCCTCTCAAATGCTTCATTTGCTTG
CTTTGATACATCGGATAGCCAATTCTTTGTTTCTTCTATAAGTGTGTCAG
GAAAGGATTGTACACCCAACCACATCAAGCCATTTGCGTGCCAGTCATAA
TCATCTCCACCATTGTATAGCACTTCCTCATCAACAGAAGCTTCTTCAAT
TGATACTCTATTTTCTCTCGCAATATCTCTAAGGAGTTGGTTTCCCATTG
TATCAACGACAGAGCCTTGTGAAGATTGACTATCTTGACTTCCTTCAAGT
GTTGATTGAGAGAAATTTATTTCTTCTATTGGTTGATTCGGCTGATTGTT
TTGTCTCTTTTGGCGTCTAGCAACTTTTTTGTCATATTCAGCCTTGGCAA
ACTGCAGCATCATTCTCACAGATTCAGGGCAATAGTCAGAGTCCAGAAAT
TGAGCAAATGATTCTGTGTATGTATCAAATCCATTTTTCAAATCATCAAC
TTTTCTCCAAGTACCAGGAGAGAATTTCATTAATagttctttagaaaaat
cttCACCTGCTGGCCATATCCAAAAGCGCTGACATCCTGTAAATACAGGA
ACATGATCTTTGTTACAGGGTGACTTCTTTCCACAATCGCACTTTTTTGC
CCAGTCGTACAAAGTAATATAGGGATTTTCTTCCCTTCTTTTatctgaaa
gaaatttgtcaacgATGGTATCTTTGGTAACTTTGCCATCTTTACCATTA
GGATCAAAAAGCCTGAAACCACTTAAACCAATTCTTTTAAATCTCCTGCT
GCAGCTGTATAGTTTACCTTTAGTATTGATGTAATCAGCAGCTGAAGATG
GAGTATCAACAAAACCAACtgttttcaaaagcagtttttgAGCGATAGAT
TTCAGAGATATTGTTGGATCAGATTTATTCAGTATTTCCTTGTATATATC
CATAAGGTCTTGTGTAGATTTGTTACCTTTACAACAATACCCAG Coding sequence (CDS) from alignment at sc0001701:29411..30654 >TCONS_00037731 ID=TCONS_00037731|Name=TCONS_00037731|organism=Clytia hemisphaerica|type=CDS|length=1155bp|location=Sequence derived from alignment at sc0001701:29411..30654 (Clytia hemisphaerica)
TTAACATTTGGATTGGATTCNTGTACCCGCACAGCCTTGAACAATTAGTC
GTTTGCAATGTTCATATCCTACAGCAAAATTTCCTCTCGCATAATCCAAA
AGAAGTTGAATATTGTAGTTGACAATTAGCATTTGGATTGGATTTACTAA
TTTTGGGTCAACATCTGGCAATGTACAAAGTCTACCTTCCCTCTCAAATG
CTTCATTTGCTTGCTTTGATACATCGGATAGCCAATTCTTTGTTTCTTCT
ATAAGTGTGTCAGGAAAGGATTGTACACCCAACCACATCAAGCCATTTGC
GTGCCAGTCATAATCATCTCCACCATTGTATAGCACTTCCTCATCAACAG
AAGCTTCTTCAATTGATACTCTATTTTCTCTCGCAATATCTCTAAGGAGT
TGGTTTCCCATTGTATCAACGACAGAGCCTTGTGAAGATTGACTATCTTG
ACTTCCTTCAAGTGTTGATTGAGAGAAATTTATTTCTTCTATTGGTTGAT
TCGGCTGATTGTTTTGTCTCTTTTGGCGTCTAGCAACTTTTTTGTCATAT
TCAGCCTTGGCAAACTGCAGCATCATTCTCACAGATTCAGGGCAATAGTC
AGAGTCCAGAAATTGAGCAAATGATTCTGTGTATGTATCAAATCCATTTT
TCAAATCATCAACTTTTCTCCAAGTACCAGGAGAGAATTTCATTAATagt
tctttagaaaaatcttCACCTGCTGGCCATATCCAAAAGCGCTGACATCC
TGTAAATACAGGAACATGATCTTTGTTACAGGGTGACTTCTTTCCACAAT
CGCACTTTTTTGCCCAGTCGTACAAAGTAATATAGGGATTTTCTTCCCTT
CTTTTatctgaaagaaatttgtcaacgATGGTATCTTTGGTAACTTTGCC
ATCTTTACCATTAGGATCAAAAAGCCTGAAACCACTTAAACCAATTCTTT
TAAATCTCCTGCTGCAGCTGTATAGTTTACCTTTAGTATTGATGTAATCA
GCAGCTGAAGATGGAGTATCAACAAAACCAACtgttttcaaaagcagttt
ttgAGCGATAGATTTCAGAGATATTGTTGGATCAGATTTATTCAGTATTT
CCTTGTATATATCCATAAGGTCTTGTGTAGATTTGTTACCTTTACAACAA
TACCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037731-exon-sc0001701-1491911889:29411..30654 | TCONS_00037731-exon-sc0001701-1491911889:29411..30654 | Clytia hemisphaerica | exon |
| TCONS_00037731-exon-sc0001701-1510915933:29411..30654 | TCONS_00037731-exon-sc0001701-1510915933:29411..30654 | Clytia hemisphaerica | exon |
| TCONS_00037731-exon-sc0001701-1575043694:29411..30654 | TCONS_00037731-exon-sc0001701-1575043694:29411..30654 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001701 | supercontig | sc0001701:29411..30654 . |
Blast
The following BLAST results are available for this feature:
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