TCONS_00037708 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037708
Unique NameTCONS_00037708
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length200

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037708 ID=TCONS_00037708|Name=TCONS_00037708|organism=Clytia hemisphaerica|type=transcript|length=200bp
GAAAATTCAGTTACTAGCTTCACTCTGATACAACTACACCGGACGGGTGG
AACGGTCATacaaaatgaagtttttatttttgatgctGATTGCAATGGCG
TGGGTAAATGAAAATCAAGCCACAAAACCTTGTTCTGACAAACATGGCGA
GCAACATTGTCAAAAATTAGAACGGCTTGGTTTCTGTGAAACGCGTGCTg
Run BLAST on NCBI

transcript from alignment at sc0001693:39377..39691+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037708 ID=TCONS_00037708|Name=TCONS_00037708|organism=Clytia hemisphaerica|type=transcript|length=315bp|location=Sequence derived from alignment at sc0001693:39377..39691+ (Clytia hemisphaerica)
GAAAATTCAGTTACTAGCTTCACTCTGATACAACTACACCGGACGGGTGG
AACGGTCATacaaaatgaagtttttatttttgatgctGATTGCAATGGCG
TGGGTAAATGAAAATCAAGCCACAAGTaagctttttgttttttcaatggT
GATTGCTTTAGTCATTAGATAAATTCTAAAGAACTTGGTACGACTTTGTT
GACTACAAGTATTTAATCGCAACTTTCTCCCTCCCTTTAGAACCTTGTTC
TGACAAACATGGCGAGCAACATTGTCAAAAATTAGAACGGCTTGGTTTCT
GTGAAACGCGTGCTg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022443XLOC_022443Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037708-exon-sc0001693-1491911889:39377..39501TCONS_00037708-exon-sc0001693-1491911889:39377..39501Clytia hemisphaericaexon
TCONS_00037708-exon-sc0001693-1510915933:39377..39501TCONS_00037708-exon-sc0001693-1510915933:39377..39501Clytia hemisphaericaexon
TCONS_00037708-exon-sc0001693-1575043694:39377..39501TCONS_00037708-exon-sc0001693-1575043694:39377..39501Clytia hemisphaericaexon
TCONS_00037708-exon-sc0001693-1491911889:39617..39691TCONS_00037708-exon-sc0001693-1491911889:39617..39691Clytia hemisphaericaexon
TCONS_00037708-exon-sc0001693-1510915933:39617..39691TCONS_00037708-exon-sc0001693-1510915933:39617..39691Clytia hemisphaericaexon
TCONS_00037708-exon-sc0001693-1575043694:39617..39691TCONS_00037708-exon-sc0001693-1575043694:39617..39691Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001693supercontigsc0001693:39377..39691 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00037708 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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