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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037707 ID=TCONS_00037707|Name=TCONS_00037707|organism=Clytia hemisphaerica|type=transcript|length=396bp
GTTGAAAATTCAGTTACTAGCTTCACTCTGATACAACTACACCGGACGGG
TGGAACGGTCATacaaaatgaagtttttatttttgatgctGATTGCAATG
GCGTGGGTAAATGAAAATCAAGCCACAAATTGCACGGATGATAGTCGATT
CACAGTTCTTTGTGATAGATTTGCAAAAGAATGTGCAGGGAGTGCGCCAA
TCGTCAAATCGGTGAGAAAGTATTGTCCGAAAACTTGCAATATTTGCGTG
AAAGATAAAACAGATGTTCCAGTGGCATCTATTGTACCTTAACTTCAGTA
AGAGGACGTGTAACTACTGTAACGGCGGAAGACGCTCTTCataattaaat
aaattttgtaaaattttgatatattcaagaacaaaactgaaatttt Run BLAST on NCBI transcript from alignment at sc0001693:39374..41655+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037707 ID=TCONS_00037707|Name=TCONS_00037707|organism=Clytia hemisphaerica|type=transcript|length=2282bp|location=Sequence derived from alignment at sc0001693:39374..41655+ (Clytia hemisphaerica)
GTTGAAAATTCAGTTACTAGCTTCACTCTGATACAACTACACCGGACGGG
TGGAACGGTCATacaaaatgaagtttttatttttgatgctGATTGCAATG
GCGTGGGTAAATGAAAATCAAGCCACAAGTaagctttttgttttttcaat
ggTGATTGCTTTAGTCATTAGATAAATTCTAAAGAACTTGGTACGACTTT
GTTGACTACAAGTATTTAATCGCAACTTTCTCCCTCCCTTTAGAACCTTG
TTCTGACAAACATGGCGAGCAACATTGTCAAAAATTAGAACGGCTTGGTT
TCTGTGAAACGCGTGCTgcaataaaagaaacatgtacaAAGACGTGTAGA
GCATGTCCTGGAATGAAGCCAGTTTCACAAACAAAAACTACGCCAAAACc
aagtactttaggcgtacaaactttNGAAAGAAACATGCACAAAGACGTGT
AGAGCATGTCCTGGAATGAAGCCAGTTTCACAAATAAAAACTACGCCAAA
ACcaagtactttaggcgtacaaacttttgcgattttcgcgaaagtaaatg
tatttgaaaattcttgagagGGTAAATCGCGAAAGCttatgctcgcaaaa
aaaaatctgaaaataaaaatttactcaaattttcctctttGACGATAACA
AGGATAAAATTTAGTGTAAATATTATGCAAAAGTCAATCAAATGTGGTTT
GAATACATTTGAACGATCAAAACTAGTTTTATATGCACCAGTAACTTGGA
TTTCTACTAAAAATATACCTCATTTGCTGATAACTTTCACGATCAGGGTC
CAATTTTGTTCTCTAAaccattttttttcgaaattgacGGAAATATTGTT
GTGACTgtttttccccggccgtttttTAGTCAAATCcttaaaaaagtctt
caaaaggcggacacttcaaTCAACGGACAGTTTTAAATGTCACGGGTCTA
TGACGTGACGTCAGAacacattgcaatggtgcatattataAATAGATATA
AAAAGTACGTTTCTTTTATAGGTGACGGGTGCCACGATAGGTACGGCAAA
ACACGGTGCGAGTACTACCAACATATAGGATGGTGTCGGAAACTATCCTC
CATCAAAAGAAATTGTAGAAACACTTGTGTCTGTTTGGGAGGTGtctcaa
aagttattgattgtcgAAAGTCAGCGTGGGGCTGTTGCAATGATAAGAAA
ACGAAGAAACAAGATGCAATCGGTTTAAATNATGGGGCTGTTGCAATGAT
AACAAAACGAAGAAACAAGATGCAATCGGTTTAAATTGTCcaggtacctt
atcggggaaaaaatatCCTGATATtcatcacccgaccaaaactttccccc
gaccaaaacatttacTATGTATTTTATACCCTAGCCGAAAATTCAAATtc
acgtttttacgtcttttttAACGAAACTAGCCGTCGGCAATTTTATCGGG
TTgcagtgactaaattgtaaatttggtagTACAAGCCacgaacttgaaat
tttggtcggggcgAATCGTCTCCCCGTTAGCTTTTCCCTAACTAATTAAA
ACCTCAACTTTTCCCCTAAATATATTATTCAGTGTACCCAAGAGCCTGAT
TTTGTGGTTGTTAAGAAGTATACGGTgattcaacgtccatctaatgttca
caacgtccatacaaCATTAAATGAATGTTGgagacaacgttgtgtgtcag
ttGAGCAGTAATAAAGTGCCCCTCCCGTTCATTGAAAATCTTTCAAGAGC
CTCCACAGCGAGGCTGTGTTTTATGCAACTGACGGTTAGTTTGATTTGTC
TGAATCCTGACTGGCTAAGTAAGGACGACATTAAATCGACACTTTTACTG
TCTTCAATTTTGCAGGTCGTTTGTTTTTCCCAATCATTTCTGTCACTGGC
CTTCCTCAAAAGGACAGATACATAAACCTCACTATTAGGCAGCTCAGAAT
ACCTGTAACTAGTTATAAAATAAGTGCACTGAGGTAATATTTTCTTACCT
CTTTTTTTATTCAGATTGCACGGATGATAGTCGATTCACAGTTCTTTGTG
ATAGATTTGCAAAAGAATGTGCAGGGAGTGCGCCAATCGTCAAATCGGTG
AGAAAGTATTGTCCGAAAACTTGCAATATTTGCGTGAAAGATAAAACAGA
TGTTCCAGTGGCATCTATTGTACCTTAACTTCAGTAAGAGGACGTGTAAC
TACTGTAACGGCGGAAGACGCTCTTCataattaaataaattttgtaaaat
tttgatatattcaagaacaaaactgaaatttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037707-exon-sc0001693-1491911889:39374..39501 | TCONS_00037707-exon-sc0001693-1491911889:39374..39501 | Clytia hemisphaerica | exon |
| TCONS_00037707-exon-sc0001693-1510915933:39374..39501 | TCONS_00037707-exon-sc0001693-1510915933:39374..39501 | Clytia hemisphaerica | exon |
| TCONS_00037707-exon-sc0001693-1575043694:39374..39501 | TCONS_00037707-exon-sc0001693-1575043694:39374..39501 | Clytia hemisphaerica | exon |
| TCONS_00037707-exon-sc0001693-1491911889:41388..41655 | TCONS_00037707-exon-sc0001693-1491911889:41388..41655 | Clytia hemisphaerica | exon |
| TCONS_00037707-exon-sc0001693-1510915933:41388..41655 | TCONS_00037707-exon-sc0001693-1510915933:41388..41655 | Clytia hemisphaerica | exon |
| TCONS_00037707-exon-sc0001693-1575043694:41388..41655 | TCONS_00037707-exon-sc0001693-1575043694:41388..41655 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001693 | supercontig | sc0001693:39374..41655 + |
Blast
The following BLAST results are available for this feature:
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