TCONS_00037702 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037702
Unique NameTCONS_00037702
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length298

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037702 ID=TCONS_00037702|Name=TCONS_00037702|organism=Clytia hemisphaerica|type=transcript|length=298bp
aaaaaacatatataaaACAAAATATGAATTGCCAATGAGGAGGAGCTTAT
AGAAATTCACAGTTCTGATTTGAGGTTGGGCCCCTAAACCCAacctttct
taaattttgggaagcttattaggattaggctttcaagagtcaagaaattg
gatttggctgtttttacgattctttttttatttggtgGGAGGGGGAGGCT
GGAATTCAAAGTTTGAGATTTACAACCCTTTTATACCATAATTCTGAACA
TGCATAAAGGGACCCTTAAAGCTGGTGTATTCTTATTGCTATAAATTA
Run BLAST on NCBI

transcript from alignment at sc0001692:7779..8076

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037702 ID=TCONS_00037702|Name=TCONS_00037702|organism=Clytia hemisphaerica|type=transcript|length=298bp|location=Sequence derived from alignment at sc0001692:7779..8076 (Clytia hemisphaerica)
TAATTTATAGCAATAAGAATACACCAGCTTTAAGGGTCCCTTTATGCATG
TTCAGAATTATGGTATAAAAGGGTTGTAAATCTCAAACTTTGAATTCCAG
CCTCCCCCTCCcaccaaataaaaaaagaatcgtaaaaacagccaaatcca
atttcttgactcttgaaagcctaatcctaataagcttcccaaaatttaag
aaaggtTGGGTTTAGGGGCCCAACCTCAAATCAGAACTGTGAATTTCTAT
AAGCTCCTCCTCATTGGCAATTCATATTTTGTtttatatatgtttttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022439XLOC_022439Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037702-exon-sc0001692-1491911889:7779..8076TCONS_00037702-exon-sc0001692-1491911889:7779..8076Clytia hemisphaericaexon
TCONS_00037702-exon-sc0001692-1510915933:7779..8076TCONS_00037702-exon-sc0001692-1510915933:7779..8076Clytia hemisphaericaexon
TCONS_00037702-exon-sc0001692-1575043694:7779..8076TCONS_00037702-exon-sc0001692-1575043694:7779..8076Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001692supercontigsc0001692:7779..8076 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.397936	0.38805	1.35169	1.32242	0.536638	0.424059	0	0	0	1.66145	0	0	0	0	0	0.484982	0	0.918562	0	0	0.384747	0	0	0	0	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00037702 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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