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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037697 ID=TCONS_00037697|Name=TCONS_00037697|organism=Clytia hemisphaerica|type=transcript|length=1080bp gtgaaaaatcggattattgaaaatatttttcatgatctATTTTGCCTTGT CCAATATCCAAATATTATTGCACTTATTTTCATTATTCCTTCCAGAATTG tatgaaataataaaatgacATCAAGTAACCAGGAAGCAATAGACAGTTTG ACTGAACGAGTTAACAGATTGTACAATCAAGTATTTACCATTCCACAACC AGCTGATTCCATTAAAAAGCCTTGTGACATTATTGACGAGACAAGATGCA TATTCGAACAGGTTGAGAAGAAAAATAGTGTTGTAAAACAGCTATGGAAA ACATTACCTCAACTTGAAGAATTTTTATCAACAGAGTTTATGAACAAAAT CGGTCTCACCGATGAGGTTAAGACTACACTCGTTTTAGCCAgTGAAGATA ATTTGAGGATTTTATCCACACAACTGGAAGAATTGAAGACACTTCAAAAT ATTCCTAATGCATCTTCACTTCAAGgAGTTCCcgataattcaaagaaatt gcAGCCTATAATTCAAGGCCAAATGGACCAAAAGgaaGACTTAGAAGAAG TAAATGGACGGCTACAATTACTTTTATGTGCATACAATGATATTATCTCA ACATTATCCAAACAATTCGTCATATGGAATAACCTGGTAACGCAATGTGA ACTGAAATACGATTCTGATCGCTCTGCTATCGAATGAATGAATTACAGAA AAATATTACTGTTGACTATTTTACTACTGCTTCGAGAACTAAAGTATGAA ATAACTTAAAAGGACATTTTGATGGATAGTTGATATATGAGCTTGTacca ttgggctcttccagaaaaaaattgaatatggggggtggaggatataacat tttttgtccCCCTGGACATTATGAATTTTGACCTCCCCCCGGACGGATCt caccccccggacaagcatcagttgaccccccggacattcaaaatcacccc taatcagAGCAAGTTTGCCCCAAAATAAGGcgaattttgcagatttttca ctactccctggacaaaaattttctggaagagcccatttttgATGGATAGG TAATATGAACTTGTGCCATTAGATGAATTA Run BLAST on NCBI protein sequence of TCONS_00037697-protein >TCONS_00037697-protein ID=TCONS_00037697-protein|Name=TCONS_00037697-protein|organism=Clytia hemisphaerica|type=polypeptide|length=190bp
MTSSNQEAIDSLTERVNRLYNQVFTIPQPADSIKKPCDIIDETRCIFEQV EKKNSVVKQLWKTLPQLEEFLSTEFMNKIGLTDEVKTTLVLASEDNLRIL STQLEELKTLQNIPNASSLQGVPDNSKKLQPIIQGQMDQKEDLEEVNGRL QLLLCAYNDIISTLSKQFVIWNNLVTQCELKYDSDRSAIE Run BLAST on NCBI transcript from alignment at sc0001689:31861..35232- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037697 ID=TCONS_00037697|Name=TCONS_00037697|organism=Clytia hemisphaerica|type=transcript|length=3372bp|location=Sequence derived from alignment at sc0001689:31861..35232- (Clytia hemisphaerica) GTGAAAAATCGGATTATTGAAAATATTTTTCATGATCTATTTTGCCTTGT
CCAATATCCAAATATTATTGCACTTATTTTCATTATTCCTTCCAGAATTG
TATGAAATAATAAAATGACATCAAGTAACCAGGAAGCAATAGACAGTTTG
ACTGAACGAGTTAACAGATTGTACAATCAAGTATTTACCATTCCACAACC
AGCTGATTCCATTAAAAAGGTATATAAATAATTCTAACTTGTCATTTCAA
CTGCTTGACCGTACTCGTCAAGACCAAATACATATTCAAAAGGTTATGCT
AGTATATGAAATTCATAACCTTTTTTGAATTCTTTTTTTCTGTTTACAGC
CTTGTGACATTATTGACGAGACAAGATGCATATTCGAACAGGTTGAGAAG
AAAAATAGTGTTGTAAAACAGCTATGGAAAACATGTAAGAGATGAGATAT
GTGAAAAAATATGTATGAGCAGGAAAACTGAATGACAGAGGGTACCAATG
TCAAACAGTGTTAGAGAATGTGATATACCTATAAGACTTCTGACAACTGA
AGACATTGTACATACTATTAATCGCAGTATTCTTTTGTATCTTTCAGTAC
CTCAACTTGAAGAATTTTTATCAACAGAGTTTATGAACAAAATCGGTCTC
ACCGATGAGGTTAAGACTACACTCGTTTTAGCCAGTAAGTTGATGTAATA
TAATATAGGTTATTTTAGAAATTTATAATTTCTTGTTATTTTATCACAAC
AATTTCAAAACAGTAAAAACAAATTCAAAGATTTCGTGGTGCTTTTTGAG
GTCTGTTCAATTCTTTGAACCACGTTTTGCAAACTGTCAATAAAATGAAA
ATATTTTATCTCTTTTTAGGTGAAGATAATTTGAGGATTTTATCCACACA
ACTNTCAACTTGAAGAATTTTTATCAACAGAGTTTATGAACAAAATCGGT
CTTTTGTATCTTTCAGTACCTCAGCTTGAAGAATTTTTATCAACAGAGTT
TATGAACAAAATCGGTCTTTTGTATCTTTCAGTACCTCAACTTGAAGAAT
TTTTATCAACAGAGTTTATGAACAAAATCGGTCTTTTGTATCTTTCAGTA
CCTCAGCTTGAAGAATTTTTATCAACAGAGTTTATGAACAAAATCGGTCT
TTTGTATCTTTCAGTACCTCAACTTGAAGAATTTTTATCAACAGAGTTTA
TGAACAAAATCGGTCTTTTGTATCTTTCAGTACCTCAGCTTGAAGAATTT
TTATCAACAGAGTTTATGAACAAAATCGGTCTTTTGTATCTTTCAGTACC
TCAACTTGAAGAATTTTTATCAACAGAGTTTATGAACAAAATCGGTCTTT
TGTATCTTTCAGTACCTCAGCTTGAAGAATTTTTATCAACAGAGTTTATG
AACAAAATCGGTCTTTTGTATCTTTCAGTACCTCAACTTGAAGAATTTTT
ATCAACAGAGTTTATGAACAAAATCGGTCTTTTGTATCTTTCAGTACCTC
AGCTTGAAGAATTTTTATCAACAGAGTTTATGAACAAAATCGGTCTTTTG
TATCTTTCAGTACCTCAACTTGAAGAATTTTTATCAACAGAGTTTATGAA
CAAAATCGGTCTCACTGACGAGGTTAAGACTACACTCGTTCTAGCCAGTA
AGTTGATGTAATATAATATAGGTTATTTTAGAAATTTATAATTTCTTGTT
ATATCACAAGTATTTCAAAACAGTAAAAAGATTTTGTGGTGTTTTCGAGG
TCTGTTCAATTCTTTGAACCTCGTTTTGCAAACTGTCAATAAAGTAATGT
GGAAATGAAAATATTTTAACTGTTTTTAGGTGAAGATAATTTGAGGATTT
TATCCACACAACTGGAAGAATTGAAGACACTTCAAAATATTCCTAATGCA
TCTTCACTTCAAGGTTTGTTTAAGATACACAGTCCAAATAAGCTATTTTA
TTGCAGATTTAATCTTATCATAAATGTCTATTAAAAGCTCTATGGGGGAT
GGTGTCAATTGCATTGGTGTCTCAAATGACAACAAATTCACATTCTTTTA
TTTTATTTTAACAGGAGTTCCCGATAATTCAAAGAAATTGCAGCCTATAA
TTCAAGGCCAAATGGACCAAAAGGTATAAAAAACTCGACATCCAATTAGA
AATTTAATTTATGTAAACTTGGCTAATACACCTAGTACACTGTGTAATCA
GTACACCCAAATGGGATGATTAAAATCTTTGCGCTGGGGTTCTTTTCCAA
TTGATCGTACTTCAACATTATTTAGAAATAGACAGTGATTTCAGCATTTA
GAGATAAGCGTATCTCCTGGTTTGGTTTGAGTAGGTTCTTAAAATGTTAT
ACATTTATTTCTTGTTCTGTGCGTCAGACACTATATCAAATGTAGGGAGT
AAAGAAGGTGAAAATTGAATTCGCTCTTTGTTGACTTGACAACATATATG
TTATTATTTGCTTATAGTTATTTAAACTTATTCTTTTATTTTTAGGAAGA
CTTAGAAGAAGTAAATGGACGGCTACAATTACTTTTATGTGCATACAATG
ATATTGTATCCTTTTCTTTTAATATTCCTACAAAAGAATATTGCACAAAA
TGATTAGTACTAACTGTGTAGTACTCAGGTGACATTGTTCAGTCAAGTGT
CCAGGGAAGGAACTTCCTCTAGTATTTGGTTTGTTTACGTTCCCACAAAA
AAGATCTTATGAGAGAAAGTTCTATAATAAATTTGGCTCTCCAGAGGTTT
TTACGATAATGAGTATACTCATACATCCCATGTTTTATACGTCTGATGTT
AAGACAGATGTTGTTTGAAAACAAATTGAAAGCCAATTTCCCTCATACTA
TTTTGCCTTGACTTCTTTCTCCACTAACATCTTTAGATCTCAACATTATC
CAAACAATTCGTCATATGGAATAACCTGGTAACGCAATGTGAACTGAAAT
ACGATTCTGATCGCTCTGCTATCGAATGAATGAATTACAGAAAAATATTA
CTGTTGACTATTTTACTACTGCTTCGAGAACTAAAGTATGAAATAACTTA
AAAGGACATTTTGATGGATAGTTGATATATGAGCTTGTACCATTGGGCTC
TTCCAGAAAAAAATTGAATATGGGGGGTGGAGGATATAACATTTTTTGTC
CCCCTGGACATTATGAATTTTGACCTCCCCCCGGACGGATCTCACCCCCC
GGACAAGCATCAGTTGACCCCCCGGACATTCAAAATCACCCCTAATCAGA
GCAAGTTTGCCCCAAAATAAGGCGAATTTTGCAGATTTTTCACTACTCCC
TGGACAAAAATTTTCTGGAAGAGCCCATTTTTGATGGATAGGTAATATGA
ACTTGTGCCATTAGATGAATTA Coding sequence (CDS) from alignment at sc0001689:31861..35232- >TCONS_00037697 ID=TCONS_00037697|Name=TCONS_00037697|organism=Clytia hemisphaerica|type=CDS|length=4011bp|location=Sequence derived from alignment at sc0001689:31861..35232- (Clytia hemisphaerica) ATCTCAACATTATCCAAACAATTCGTCATATGGAATAACCTGGTAACGCA ATGTGAACTGAAATACGATTCTGATCGCTCTGCTATCGAATGAGAAGACT TAGAAGAAGTAAATGGACGGCTACAATTACTTTTATGTGCATACAATGAT ATTGAGTTCCCGATAATTCAAAGAAATTGCAGCCTATAATTCAAGGCCAA ATGGACCAAAAGGTGAAGATAATTTGAGGATTTTATCCACACAACTGGAA GAATTGAAGACACTTCAAAATATTCCTAATGCATCTTCACTTCAAGTACC TCAACTTGAAGAATTTTTATCAACAGAGTTTATGAACAAAATCGGTCTCA CCGATGAGGTTAAGACTACACTCGTTTTAGCCACCTTGTGACATTATTGA CGAGACAAGATGCATATTCGAACAGGTTGAGAAGAAAAATAGTGTTGTAA AACAGCTATGGAAAACATATGACATCAAGTAACCAGGAAGCAATAGACAG TTTGACTGAACGAGTTAACAGATTGTACAATCAAGTATTTACCATTCCAC AACCAGCTGATTCCATTAAAAAGATCTCAACATTATCCAAACAATTCGTC ATATGGAATAACCTGGTAACGCAATGTGAACTGAAATACGATTCTGATCG CTCTGCTATCGAATGAGAAGACTTAGAAGAAGTAAATGGACGGCTACAAT TACTTTTATGTGCATACAATGATATTGAGTTCCCGATAATTCAAAGAAAT TGCAGCCTATAATTCAAGGCCAAATGGACCAAAAGGTGAAGATAATTTGA GGATTTTATCCACACAACTGGAAGAATTGAAGACACTTCAAAATATTCCT AATGCATCTTCACTTCAAGTACCTCAACTTGAAGAATTTTTATCAACAGA GTTTATGAACAAAATCGGTCTCACCGATGAGGTTAAGACTACACTCGTTT TAGCCACCTTGTGACATTATTGACGAGACAAGATGCATATTCGAACAGGT TGAGAAGAAAAATAGTGTTGTAAAACAGCTATGGAAAACATATGACATCA AGTAACCAGGAAGCAATAGACAGTTTGACTGAACGAGTTAACAGATTGTA CAATCAAGTATTTACCATTCCACAACCAGCTGATTCCATTAAAAAGATCT CAACATTATCCAAACAATTCGTCATATGGAATAACCTGGTAACGCAATGT GAACTGAAATACGATTCTGATCGCTCTGCTATCGAATGAGAAGACTTAGA AGAAGTAAATGGACGGCTACAATTACTTTTATGTGCATACAATGATATTG AGTTCCCGATAATTCAAAGAAATTGCAGCCTATAATTCAAGGCCAAATGG ACCAAAAGGTGAAGATAATTTGAGGATTTTATCCACACAACTGGAAGAAT TGAAGACACTTCAAAATATTCCTAATGCATCTTCACTTCAAGTACCTCAA CTTGAAGAATTTTTATCAACAGAGTTTATGAACAAAATCGGTCTCACCGA TGAGGTTAAGACTACACTCGTTTTAGCCACCTTGTGACATTATTGACGAG ACAAGATGCATATTCGAACAGGTTGAGAAGAAAAATAGTGTTGTAAAACA GCTATGGAAAACATATGACATCAAGTAACCAGGAAGCAATAGACAGTTTG ACTGAACGAGTTAACAGATTGTACAATCAAGTATTTACCATTCCACAACC AGCTGATTCCATTAAAAAGATCTCAACATTATCCAAACAATTCGTCATAT GGAATAACCTGGTAACGCAATGTGAACTGAAATACGATTCTGATCGCTCT GCTATCGAATGAGAAGACTTAGAAGAAGTAAATGGACGGCTACAATTACT TTTATGTGCATACAATGATATTGAGTTCCCGATAATTCAAAGAAATTGCA GCCTATAATTCAAGGCCAAATGGACCAAAAGGTGAAGATAATTTGAGGAT TTTATCCACACAACTGGAAGAATTGAAGACACTTCAAAATATTCCTAATG CATCTTCACTTCAAGTACCTCAACTTGAAGAATTTTTATCAACAGAGTTT ATGAACAAAATCGGTCTCACCGATGAGGTTAAGACTACACTCGTTTTAGC CACCTTGTGACATTATTGACGAGACAAGATGCATATTCGAACAGGTTGAG AAGAAAAATAGTGTTGTAAAACAGCTATGGAAAACATATGACATCAAGTA ACCAGGAAGCAATAGACAGTTTGACTGAACGAGTTAACAGATTGTACAAT CAAGTATTTACCATTCCACAACCAGCTGATTCCATTAAAAAGATCTCAAC ATTATCCAAACAATTCGTCATATGGAATAACCTGGTAACGCAATGTGAAC TGAAATACGATTCTGATCGCTCTGCTATCGAATGAGAAGACTTAGAAGAA GTAAATGGACGGCTACAATTACTTTTATGTGCATACAATGATATTGAGTT CCCGATAATTCAAAGAAATTGCAGCCTATAATTCAAGGCCAAATGGACCA AAAGGTGAAGATAATTTGAGGATTTTATCCACACAACTGGAAGAATTGAA GACACTTCAAAATATTCCTAATGCATCTTCACTTCAAGTACCTCAACTTG AAGAATTTTTATCAACAGAGTTTATGAACAAAATCGGTCTCACCGATGAG GTTAAGACTACACTCGTTTTAGCCACCTTGTGACATTATTGACGAGACAA GATGCATATTCGAACAGGTTGAGAAGAAAAATAGTGTTGTAAAACAGCTA TGGAAAACATATGACATCAAGTAACCAGGAAGCAATAGACAGTTTGACTG AACGAGTTAACAGATTGTACAATCAAGTATTTACCATTCCACAACCAGCT GATTCCATTAAAAAGATCTCAACATTATCCAAACAATTCGTCATATGGAA TAACCTGGTAACGCAATGTGAACTGAAATACGATTCTGATCGCTCTGCTA TCGAATGAGAAGACTTAGAAGAAGTAAATGGACGGCTACAATTACTTTTA TGTGCATACAATGATATTGAGTTCCCGATAATTCAAAGAAATTGCAGCCT ATAATTCAAGGCCAAATGGACCAAAAGGTGAAGATAATTTGAGGATTTTA TCCACACAACTGGAAGAATTGAAGACACTTCAAAATATTCCTAATGCATC TTCACTTCAAGTACCTCAACTTGAAGAATTTTTATCAACAGAGTTTATGA ACAAAATCGGTCTCACCGATGAGGTTAAGACTACACTCGTTTTAGCCACC TTGTGACATTATTGACGAGACAAGATGCATATTCGAACAGGTTGAGAAGA AAAATAGTGTTGTAAAACAGCTATGGAAAACATATGACATCAAGTAACCA GGAAGCAATAGACAGTTTGACTGAACGAGTTAACAGATTGTACAATCAAG TATTTACCATTCCACAACCAGCTGATTCCATTAAAAAGATCTCAACATTA TCCAAACAATTCGTCATATGGAATAACCTGGTAACGCAATGTGAACTGAA ATACGATTCTGATCGCTCTGCTATCGAATGAGAAGACTTAGAAGAAGTAA ATGGACGGCTACAATTACTTTTATGTGCATACAATGATATTGAGTTCCCG ATAATTCAAAGAAATTGCAGCCTATAATTCAAGGCCAAATGGACCAAAAG GTGAAGATAATTTGAGGATTTTATCCACACAACTGGAAGAATTGAAGACA CTTCAAAATATTCCTAATGCATCTTCACTTCAAGTACCTCAACTTGAAGA ATTTTTATCAACAGAGTTTATGAACAAAATCGGTCTCACCGATGAGGTTA AGACTACACTCGTTTTAGCCACCTTGTGACATTATTGACGAGACAAGATG CATATTCGAACAGGTTGAGAAGAAAAATAGTGTTGTAAAACAGCTATGGA AAACATATGACATCAAGTAACCAGGAAGCAATAGACAGTTTGACTGAACG AGTTAACAGATTGTACAATCAAGTATTTACCATTCCACAACCAGCTGATT CCATTAAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
| TCONS_00037697-exon-sc0001689-1575043694:35014..35232 | TCONS_00037697-exon-sc0001689-1575043694:35014..35232 | Clytia hemisphaerica | exon |
| TCONS_00037697-exon-sc0001689-1575043694:34799..34883 | TCONS_00037697-exon-sc0001689-1575043694:34799..34883 | Clytia hemisphaerica | exon |
| TCONS_00037697-exon-sc0001689-1575043694:34549..34635 | TCONS_00037697-exon-sc0001689-1575043694:34549..34635 | Clytia hemisphaerica | exon |
| TCONS_00037697-exon-sc0001689-1575043694:33320..33403 | TCONS_00037697-exon-sc0001689-1575043694:33320..33403 | Clytia hemisphaerica | exon |
| TCONS_00037697-exon-sc0001689-1575043694:33110..33168 | TCONS_00037697-exon-sc0001689-1575043694:33110..33168 | Clytia hemisphaerica | exon |
| TCONS_00037697-exon-sc0001689-1575043694:32678..32737 | TCONS_00037697-exon-sc0001689-1575043694:32678..32737 | Clytia hemisphaerica | exon |
| TCONS_00037697-exon-sc0001689-1575043694:31861..32346 | TCONS_00037697-exon-sc0001689-1575043694:31861..32346 | Clytia hemisphaerica | exon |
| TCONS_00037697-exon-sc0001689-1510915933:35014..35232 | TCONS_00037697-exon-sc0001689-1510915933:35014..35232 | Clytia hemisphaerica | exon |
| TCONS_00037697-exon-sc0001689-1510915933:34799..34883 | TCONS_00037697-exon-sc0001689-1510915933:34799..34883 | Clytia hemisphaerica | exon |
| TCONS_00037697-exon-sc0001689-1510915933:34549..34635 | TCONS_00037697-exon-sc0001689-1510915933:34549..34635 | Clytia hemisphaerica | exon |
| TCONS_00037697-exon-sc0001689-1510915933:33320..33403 | TCONS_00037697-exon-sc0001689-1510915933:33320..33403 | Clytia hemisphaerica | exon |
| TCONS_00037697-exon-sc0001689-1510915933:33110..33168 | TCONS_00037697-exon-sc0001689-1510915933:33110..33168 | Clytia hemisphaerica | exon |
| TCONS_00037697-exon-sc0001689-1510915933:32678..32737 | TCONS_00037697-exon-sc0001689-1510915933:32678..32737 | Clytia hemisphaerica | exon |
| TCONS_00037697-exon-sc0001689-1510915933:31861..32346 | TCONS_00037697-exon-sc0001689-1510915933:31861..32346 | Clytia hemisphaerica | exon |
| TCONS_00037697-exon-sc0001689-1491911889:35014..35232 | TCONS_00037697-exon-sc0001689-1491911889:35014..35232 | Clytia hemisphaerica | exon |
| TCONS_00037697-exon-sc0001689-1491911889:34799..34883 | TCONS_00037697-exon-sc0001689-1491911889:34799..34883 | Clytia hemisphaerica | exon |
| TCONS_00037697-exon-sc0001689-1491911889:34549..34635 | TCONS_00037697-exon-sc0001689-1491911889:34549..34635 | Clytia hemisphaerica | exon |
| TCONS_00037697-exon-sc0001689-1491911889:33320..33403 | TCONS_00037697-exon-sc0001689-1491911889:33320..33403 | Clytia hemisphaerica | exon |
| TCONS_00037697-exon-sc0001689-1491911889:33110..33168 | TCONS_00037697-exon-sc0001689-1491911889:33110..33168 | Clytia hemisphaerica | exon |
| TCONS_00037697-exon-sc0001689-1491911889:32678..32737 | TCONS_00037697-exon-sc0001689-1491911889:32678..32737 | Clytia hemisphaerica | exon |
| TCONS_00037697-exon-sc0001689-1491911889:31861..32346 | TCONS_00037697-exon-sc0001689-1491911889:31861..32346 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0001689 | supercontig | sc0001689:31861..35232 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
| IPR009991 | Dynactin_p22 |
Blast
The following BLAST results are available for this feature:
|