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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037695 ID=TCONS_00037695|Name=TCONS_00037695|organism=Clytia hemisphaerica|type=transcript|length=2421bp
GAAAATCTTAAATGATCCTATTAATCAATGAAAGTCTTCATTATAGATGC
AATCAACATGGTTACCTAGcaacaaagttttttttgtcaTGGTTATAATC
CTGATTAATAGAAAGTAATGGAGTTAAAAGAGGATTAGCAATATTGTTAA
TTTGATTGCCACAGGTCATTATCAACCATAGTTTTAATGTTTTCcccttt
taatttttgaaagacATTTTACACAGGTGTCTTATTGCAGCAGATGCAAC
TAGCTTCAATTTGATATACAACAAGCTTTCGACCAGCATACTGTACATTC
GTTTGTTACTTGTGGATACATTCTACGAAAGCTTCCAACGTACAATTGAA
AATGCCATTCAAAATGAAGGACGTCGTGAAAATGGGGTTAAAAGGTCGTA
CACGTAGCCAGGGAGAATCACTTCCTTTAGTTGTCGAGCAACAGCAACGG
TCTTACTCTAACAGCAACAACAACCATCGTAAAATCAGCGGCAGTCAAGA
TTTTGAACGCCATATGAGTACATCGTCCTCGACTACAAGCCTTAGACCGA
ACAGCATGTCGTTTGACAACCTAAATGTCGTCAAAATACGCCCAGGTATG
CCTCATGGCCCACCCAGCCCTAAAATGCCGGTTGAAAAAGTGGAGGTTGA
TTACGAGAATGTTCCGTTTCAATATTACACTCGGAAAGCAGAAAACAACG
AAATTACAAGTTTGCTGAAAGCATTAGCCTTAGTTCTTATCTTATTCATA
TGTCCGTCAATTCTTGTGTTCGTTGTGTTTTTGTTCACCAAATGCTGCAA
AACGTCTGAGCAACGCAAGATGACCGATCAACAAAAGAAAGAGGTCAATC
AGAAATTCGTCATTGTTGGAGTCTTAACTTTCATCACTGATCTATTAATC
ACTGGAGTGATTTTACATTTCTACTTCGGCACTGATGTACCGTTATATCA
TGTTTTGTACGCAACGATTTTATCTCTTTGGTTACTCGCAGCGTTCGTCG
GACCTTCATTATGGTTTTATTTCGCCAGCACGAAGTATGAGTTTGGTTTT
AATGTCAACAAGTTCAAGGGTTCGAAATCTTTCGATGATTCTTTCACCTC
CAACAAGACCAAAGACTCCATCGCACGCAAACTGAATGAACAACAAGAAC
AATTCAAAGAAGATTACCAAAATCTTTCCAGTATGGAGACATCAGATGCC
GAGTTCCTCTTTGTCCGAAAGTCTTCCCCTCGCTATGTCCTTATTTGTGC
GATCATCTTAGGACTAGTTTCCAGTCTAGTTCGTACCTTGATTCCTCTTT
TGATCCAGCTTAGTAACTTGACAGACTTAACTGGCTCGATCAATATTGAC
GGAATGACAATAGCAGTACTAGCTATTTCGACTTTCAACGCGTTCATTGT
ATCTTTGATCGCCGCACCGTATTTTGTTTACGTTATTTTATGGAAAATCG
GGATGTTACGTGAATGGAAACGTTTTAACGCGAACGAACGTGACACGCGT
AAAACTTTGGTCAACGGAGGCCCGCAAGGAATCGCAATGTGGTGGAAAAT
TCGTCAAACTTTGAATCATTTTTCGTCATCTTCAAAAAGTTTATCAGTTC
TGATCACCGATGTGACCATCTCTAttgctaccattttgattgcGACGCTA
TCTGTTATTGTGTTtaagatgatgacgtcatcttcaCGTCAACATGACGT
CATACCATTTTTGTTGGATAATTTGTTTTTGTACGGTGCAATATTAGTGT
TGGCTTCGTTGTCCGTGTTGATCAAGAAAGAGCAGAAAGTTTCTGGAGAT
ACAATCGAATTAAAGCAATTAAATTTGTGTTATGAATTGGGACATTTGAT
GAATTTGGAGCAAGATGCTATGGATGTCGAACCAGGCGTTAAAGTAAAAG
TTCGTGTTTTTCGTGGATGTTTAATGTTACTTCAAGAGTTGACGATTGTC
TTGAGAAAGTTTGAGAAACACTCGTTGTTGAGTTTGCATACGATCTGTTT
GGTAGTGTCATCCATTTGCTTTCTCTTCTCGACCGGGTTTTGtctttgga
aatttttgatggAATAAACATTGTTGATACAATCAAATTTATTATGCTTG
AACATTTTTTTGTGTAGGATTTTCAGAAGAAGCACCATCTAGGATTTGAC
GAGGCCAGCAATTGAAACGTTGTTGGTGATAATATTTCTTAATTCTTTTT
CTAgaaaattttgatatatttagaTAGATTTTATACCACATATCATAATA
TGGTATAGCCCATGAGCTAGACACTTTTTGGGGCTCACTCGACAGAGAAA
GCCTCACTATGATTTTTAGGAGGTGGTAAACGCgaagttttcatttttgc
ttGGATTTCCTTAGGAAATGAAATTACCATGTCATCTTTAAAATAGTATA
TCTCGGTCAATAATGTTCaaa Run BLAST on NCBI protein sequence of TCONS_00037695-protein >TCONS_00037695-protein ID=TCONS_00037695-protein|Name=TCONS_00037695-protein|organism=Clytia hemisphaerica|type=polypeptide|length=571bp
MPFKMKDVVKMGLKGRTRSQGESLPLVVEQQQRSYSNSNNNHRKISGSQD
FERHMSTSSSTTSLRPNSMSFDNLNVVKIRPGMPHGPPSPKMPVEKVEVD
YENVPFQYYTRKAENNEITSLLKALALVLILFICPSILVFVVFLFTKCCK
TSEQRKMTDQQKKEVNQKFVIVGVLTFITDLLITGVILHFYFGTDVPLYH
VLYATILSLWLLAAFVGPSLWFYFASTKYEFGFNVNKFKGSKSFDDSFTS
NKTKDSIARKLNEQQEQFKEDYQNLSSMETSDAEFLFVRKSSPRYVLICA
IILGLVSSLVRTLIPLLIQLSNLTDLTGSINIDGMTIAVLAISTFNAFIV
SLIAAPYFVYVILWKIGMLREWKRFNANERDTRKTLVNGGPQGIAMWWKI
RQTLNHFSSSSKSLSVLITDVTISIATILIATLSVIVFKMMTSSSRQHDV
IPFLLDNLFLYGAILVLASLSVLIKKEQKVSGDTIELKQLNLCYELGHLM
NLEQDAMDVEPGVKVKVRVFRGCLMLLQELTIVLRKFEKHSLLSLHTICL
VVSSICFLFSTGFCLWKFLME Run BLAST on NCBI transcript from alignment at sc0001689:28547..31234- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037695 ID=TCONS_00037695|Name=TCONS_00037695|organism=Clytia hemisphaerica|type=transcript|length=2688bp|location=Sequence derived from alignment at sc0001689:28547..31234- (Clytia hemisphaerica)
GAAAATCTTAAATGATCCTATTAATCAATGAAAGTCTTCATTATAGATGC
AATCAACATGGTTACCTAGCAACAAAGTTTTTTTTGTCATGGTTATAATC
CTGATTAATAGAAAGTAATGGAGTTAAAAGAGGATTAGCAATATTGTTAA
TTTGATTGCCACAGGTCATTATCAACCATAGTTTTAATGTTTTCCCCTTT
TAATTTTTGAAAGACATTTTACACAGGTGTCTTATTGCAGCAGATGCAAC
TAGCTTCAATTTGATATACAACAAGCTTTCGACCAGCATACTGTACATTC
GTTTGTTACTTGTGGATACATTCTACGAAGTAAGGTATTCATTAATTAGC
ATCAGTCTCCAACATTCTTTATATCATCAATTATTACTTTTCTGTGTCCT
TTATTGTAAGAAATGGAAATTCTATAACGTAAAGGTCTCCTCAATTTTAA
GTGGGCTTTTACATTTGATGGCTTCATTAAATAAAACGCGGATATCCATT
CTGGTCTCCACTGGCTTTGGTGATGTTTGTATTGTGTTTTTTCGCCGTTT
ACCGTTACTCCACCGTTGTTTTCACACTAACGTTTGTTTCGTTTAGAGCT
TCCAACGTACAATTGAAAATGCCATTCAAAATGAAGGACGTCGTGAAAAT
GGGGTTAAAAGGTCGTACACGTAGCCAGGGAGAATCACTTCCTTTAGTTG
TCGAGCAACAGCAACGGTCTTACTCTAACAGCAACAACAACCATCGTAAA
ATCAGCGGCAGTCAAGATTTTGAACGCCATATGAGTACATCGTCCTCGAC
TACAAGCCTTAGACCGAACAGCATGTCGTTTGACAACCTAAATGTCGTCA
AAATACGCCCAGGTATGCCTCATGGCCCACCCAGCCCTAAAATGCCGGTT
GAAAAAGTGGAGGTTGATTACGAGAATGTTCCGTTTCAATATTACACTCG
GAAAGCAGAAAACAACGAAATTACAAGTTTGCTGAAAGCATTAGCCTTAG
TTCTTATCTTATTCATATGTCCGTCAATTCTTGTGTTCGTTGTGTTTTTG
TTCACCAAATGCTGCAAAACGTCTGAGCAACGCAAGATGACCGATCAACA
AAAGAAAGAGGTCAATCAGAAATTCGTCATTGTTGGAGTCTTAACTTTCA
TCACTGATCTATTAATCACTGGAGTGATTTTACATTTCTACTTCGGCACT
GATGTACCGTTATATCATGTTTTGTACGCAACGATTTTATCTCTTTGGTT
ACTCGCAGCGTTCGTCGGACCTTCATTATGGTTTTATTTCGCCAGCACGA
AGTATGAGTTTGGTTTTAATGTCAACAAGTTCAAGGGTTCGAAATCTTTC
GATGATTCTTTCACCTCCAACAAGACCAAAGACTCCATCGCACGCAAACT
GAATGAACAACAAGAACAATTCAAAGAAGATTACCAAAATCTTTCCAGTA
TGGAGACATCAGATGCCGAGTTCCTCTTTGTCCGAAAGTCTTCCCCTCGC
TATGTCCTTATTTGTGCGATCATCTTAGGACTAGTTTCCAGTCTAGTTCG
TACCTTGATTCCTCTTTTGATCCAGCTTAGTAACTTGACAGACTTAACTG
GCTCGATCAATATTGACGGAATGACAATAGCAGTACTAGCTATTTCGACT
TTCAACGCGTTCATTGTATCTTTGATCGCCGCACCGTATTTTGTTTACGT
TATTTTATGGAAAATCGGGATGTTACGTGAATGGAAACGTTTTAACGCGA
ACGAACGTGACACGCGTAAAACTTTGGTCAACGGAGGCCCGCAAGGAATC
GCAATGTGGTGGAAAATTCGTCAAACTTTGAATCATTTTTCGTCATCTTC
AAAAAGTTTATCAGTTCTGATCACCGATGTGACCATCTCTATTGCTACCA
TTTTGATTGCGACGCTATCTGTTATTGTGTTTAAGATGATGACGTCATCT
TCACGTCAACATGACGTCATACCATTTTTGTTGGATAATTTGTTTTTGTA
CGGTGCAATATTAGTGTTGGCTTCGTTGTCCGTGTTGATCAAGAAAGAGC
AGAAAGTTTCTGGAGATACAATCGAATTAAAGCAATTAAATTTGTGTTAT
GAATTGGGACATTTGATGAATTTGGAGCAAGATGCTATGGATGTCGAACC
AGGCGTTAAAGTAAAAGTTCGTGTTTTTCGTGGATGTTTAATGTTACTTC
AAGAGTTGACGATTGTCTTGAGAAAGTTTGAGAAACACTCGTTGTTGAGT
TTGCATACGATCTGTTTGGTAGTGTCATCCATTTGCTTTCTCTTCTCGAC
CGGGTTTTGTCTTTGGAAATTTTTGATGGAATAAACATTGTTGATACAAT
CAAATTTATTATGCTTGAACATTTTTTTGTGTAGGATTTTCAGAAGAAGC
ACCATCTAGGATTTGACGAGGCCAGCAATTGAAACGTTGTTGGTGATAAT
ATTTCTTAATTCTTTTTCTAGAAAATTTTGATATATTTAGATAGATTTTA
TACCACATATCATAATATGGTATAGCCCATGAGCTAGACACTTTTTGGGG
CTCACTCGACAGAGAAAGCCTCACTATGATTTTTAGGAGGTGGTAAACGC
GAAGTTTTCATTTTTGCTTGGATTTCCTTAGGAAATGAAATTACCATGTC
ATCTTTAAAATAGTATATCTCGGTCAATAATGTTCAAA Coding sequence (CDS) from alignment at sc0001689:28547..31234- >TCONS_00037695 ID=TCONS_00037695|Name=TCONS_00037695|organism=Clytia hemisphaerica|type=CDS|length=1716bp|location=Sequence derived from alignment at sc0001689:28547..31234- (Clytia hemisphaerica)
ATGCCATTCAAAATGAAGGACGTCGTGAAAATGGGGTTAAAAGGTCGTAC
ACGTAGCCAGGGAGAATCACTTCCTTTAGTTGTCGAGCAACAGCAACGGT
CTTACTCTAACAGCAACAACAACCATCGTAAAATCAGCGGCAGTCAAGAT
TTTGAACGCCATATGAGTACATCGTCCTCGACTACAAGCCTTAGACCGAA
CAGCATGTCGTTTGACAACCTAAATGTCGTCAAAATACGCCCAGGTATGC
CTCATGGCCCACCCAGCCCTAAAATGCCGGTTGAAAAAGTGGAGGTTGAT
TACGAGAATGTTCCGTTTCAATATTACACTCGGAAAGCAGAAAACAACGA
AATTACAAGTTTGCTGAAAGCATTAGCCTTAGTTCTTATCTTATTCATAT
GTCCGTCAATTCTTGTGTTCGTTGTGTTTTTGTTCACCAAATGCTGCAAA
ACGTCTGAGCAACGCAAGATGACCGATCAACAAAAGAAAGAGGTCAATCA
GAAATTCGTCATTGTTGGAGTCTTAACTTTCATCACTGATCTATTAATCA
CTGGAGTGATTTTACATTTCTACTTCGGCACTGATGTACCGTTATATCAT
GTTTTGTACGCAACGATTTTATCTCTTTGGTTACTCGCAGCGTTCGTCGG
ACCTTCATTATGGTTTTATTTCGCCAGCACGAAGTATGAGTTTGGTTTTA
ATGTCAACAAGTTCAAGGGTTCGAAATCTTTCGATGATTCTTTCACCTCC
AACAAGACCAAAGACTCCATCGCACGCAAACTGAATGAACAACAAGAACA
ATTCAAAGAAGATTACCAAAATCTTTCCAGTATGGAGACATCAGATGCCG
AGTTCCTCTTTGTCCGAAAGTCTTCCCCTCGCTATGTCCTTATTTGTGCG
ATCATCTTAGGACTAGTTTCCAGTCTAGTTCGTACCTTGATTCCTCTTTT
GATCCAGCTTAGTAACTTGACAGACTTAACTGGCTCGATCAATATTGACG
GAATGACAATAGCAGTACTAGCTATTTCGACTTTCAACGCGTTCATTGTA
TCTTTGATCGCCGCACCGTATTTTGTTTACGTTATTTTATGGAAAATCGG
GATGTTACGTGAATGGAAACGTTTTAACGCGAACGAACGTGACACGCGTA
AAACTTTGGTCAACGGAGGCCCGCAAGGAATCGCAATGTGGTGGAAAATT
CGTCAAACTTTGAATCATTTTTCGTCATCTTCAAAAAGTTTATCAGTTCT
GATCACCGATGTGACCATCTCTATTGCTACCATTTTGATTGCGACGCTAT
CTGTTATTGTGTTTAAGATGATGACGTCATCTTCACGTCAACATGACGTC
ATACCATTTTTGTTGGATAATTTGTTTTTGTACGGTGCAATATTAGTGTT
GGCTTCGTTGTCCGTGTTGATCAAGAAAGAGCAGAAAGTTTCTGGAGATA
CAATCGAATTAAAGCAATTAAATTTGTGTTATGAATTGGGACATTTGATG
AATTTGGAGCAAGATGCTATGGATGTCGAACCAGGCGTTAAAGTAAAAGT
TCGTGTTTTTCGTGGATGTTTAATGTTACTTCAAGAGTTGACGATTGTCT
TGAGAAAGTTTGAGAAACACTCGTTGTTGAGTTTGCATACGATCTGTTTG
GTAGTGTCATCCATTTGCTTTCTCTTCTCGACCGGGTTTTGTCTTTGGAA
ATTTTTGATGGAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037695-exon-sc0001689-1575043694:30906..31234 | TCONS_00037695-exon-sc0001689-1575043694:30906..31234 | Clytia hemisphaerica | exon |
| TCONS_00037695-exon-sc0001689-1575043694:28547..30638 | TCONS_00037695-exon-sc0001689-1575043694:28547..30638 | Clytia hemisphaerica | exon |
| TCONS_00037695-exon-sc0001689-1510915933:30906..31234 | TCONS_00037695-exon-sc0001689-1510915933:30906..31234 | Clytia hemisphaerica | exon |
| TCONS_00037695-exon-sc0001689-1510915933:28547..30638 | TCONS_00037695-exon-sc0001689-1510915933:28547..30638 | Clytia hemisphaerica | exon |
| TCONS_00037695-exon-sc0001689-1491911889:30906..31234 | TCONS_00037695-exon-sc0001689-1491911889:30906..31234 | Clytia hemisphaerica | exon |
| TCONS_00037695-exon-sc0001689-1491911889:28547..30638 | TCONS_00037695-exon-sc0001689-1491911889:28547..30638 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001689 | supercontig | sc0001689:28547..31234 - |
Blast
The following BLAST results are available for this feature:
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