TCONS_00037626 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037626
Unique NameTCONS_00037626
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length270

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037626 ID=TCONS_00037626|Name=TCONS_00037626|organism=Clytia hemisphaerica|type=transcript|length=270bp
GGTTGTTGGTGTGAATCACTAGTTTCTGTTGTTGAAGTCGTTGTTCTTTC
TCCAAGAATTTGATGAAGCGAAGCCAGGTGGTTTTGGGTGAAAGGACTTC
GTCAGAGATCGATGATAACCAACGGGTTAAACGACTATCTCCAATCAGGT
TGTAGATACGATTCAGGCCATCTCCATAAAATAAAGACTCCTCTGCTAGT
CGCATCAGTTCTTTGATGATGTTGATAATTGATGTTGTAGCTTGGATGAG
TTTTTCGGGGTCCTTGATAC
Run BLAST on NCBI

transcript from alignment at sc0001668:9507..9776

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037626 ID=TCONS_00037626|Name=TCONS_00037626|organism=Clytia hemisphaerica|type=transcript|length=270bp|location=Sequence derived from alignment at sc0001668:9507..9776 (Clytia hemisphaerica)
GTATCAAGGACCCCGAAAAACTCATCCAAGCTACAACATCAATTATCAAC
ATCATCAAAGAACTGATGCGACTAGCAGAGGAGTCTTTATTTTATGGAGA
TGGCCTGAATCGTATCTACAACCTGATTGGAGATAGTCGTTTAACCCGTT
GGTTATCATCGATCTCTGACGAAGTCCTTTCACCCAAAACCACCTGGCTT
CGCTTCATCAAATTCTTGGAGAAAGAACAACGACTTCAACAACAGAAACT
AGTGATTCACACCAACAACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022376XLOC_022376Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037626-exon-sc0001668-1491911889:9507..9776TCONS_00037626-exon-sc0001668-1491911889:9507..9776Clytia hemisphaericaexon
TCONS_00037626-exon-sc0001668-1510915933:9507..9776TCONS_00037626-exon-sc0001668-1510915933:9507..9776Clytia hemisphaericaexon
TCONS_00037626-exon-sc0001668-1575043694:9507..9776TCONS_00037626-exon-sc0001668-1575043694:9507..9776Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001668supercontigsc0001668:9507..9776 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.70018	0.552647	0.641677	0.62778	3.82131	3.62358	0	4.77485	0.955139	1.18309	3.44502	0.754873	1.50765	0.391427	0.965418	1.03604	0.425439	0.872123	1.20489	0.630413	0	0	0	0	0	2.17218	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00037626 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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