TCONS_00037605 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037605
Unique NameTCONS_00037605
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3610

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037605 ID=TCONS_00037605|Name=TCONS_00037605|organism=Clytia hemisphaerica|type=transcript|length=3610bp
ttcagaataaaaacaaaaagattcattaaaaattataaaaaaacatgttg
aACAGTGTATATGCAGCCATCAATCAACGCACACTTGCGATAGCCGATCG
TAACCTAGCAACGTATGGCCTGAACGGACAATTGCCGTCCGATACAGACG
ACGAGGACTATATTCCATCAGGGGAACCCTCTGCCAAGACAAACAAAAGG
AAGAGAAAGATGACCAGGAAAGTGATATCAACTTCTGAGGATGAAGACGG
TGATTCCATTGAGAGTGATCATAGTGAAGAGAAGGAAGAGAAGCCAAAAG
cgaaaagaaagaaaaagaaacttaCACCTGGCAAGAGAAAGAAAGCGAAT
GCAAAGATTAAAAATGCAGATGACGACGAGAAACCGTCaacttcaaattc
aaagaagaaaaaagGCGATGTAAAGAAAAAGTCAACATCTTCTGCTACAA
AGAAAACTAAAGCAAAAGCAACCAACAACAAACCAGATGAAGACTCTACA
AGTACTCGTAAAAAATCGAACCGATCGAAGCTTTTGTTTGGAGCTGACCG
TGGAAGCGATGACTCGGAAGACGAAGATTATGTTCCAGAGGGCGGCCGTC
CATCCTCCAAACCCACTGTGAAGAAGAAAAGTAACCGCATAAACAAAAGT
GACACAAGCATTCAAAACAAGACTTTCAATAATGGTGGAACGTCACTTGA
ATGGGCAGAACTTCCCATCGAAATCTTATCGATGATATTTCGTTTCATCA
CAGCAACAGAATCGAAAGGTGTTCGTTACATTCTTCGATGTTCACAAGTT
TGCCAGCACTGGCGAAACGTGGTTAACAATGAAGCCTCCTGGTTTGATAT
CGATCTCTCATTTGTTGGGCCCAGCCACAAAGAACGAAAAATCACGCGAA
TCCTGTCTAAAATCTGTCCCATACAACTAGTCTGTGTTCGCTCGCTTAGC
CTGAGTGGATGGTGCGAGTTGACCGATGAGGGTCTGGATCACGTGTCTGA
GAATTGCACCAAGATTGAGAAACTGGATCTGTCGTCGTGTCAGAAAAGCG
TTGCAAAGTTAACAAGTTCTTCTTTGTTAAACATTGCTGAGAATTGTACT
GAATTACAAAAGTTGAATGTTTCTAATTTACGTGTCAACAGTTATAATCA
AATATGGAGTAAATTTCTTCAAATACGCGGTGCAGGACTTATCAGTATGA
ATTTTAGTAATAATATCCCTTTCTCAAATACTTGTTTCAAGTTGATTACT
GACAATTGTCCGTTATTGAAAATCCTTGATTGTTCTAATACCGGTCTTAG
GAGTTTATCTCTTCAAGAGTTCCAGACGAAATGTCCGTTACTGGAAGAAC
TGTATTTGGCAAACGTCAATATTGTCGTACGACGTCATAATAACGAGCTG
AAAACGTGCCCTGGGTTCGACCATTTGTCCTTAGTCAGTTTCGCTTCACA
GAATTTCAACTGCTGGGTAACAGATGAGGTTTTAAATGGGTTTCTCAAAA
GCGCTATCAGTTTGAAAACTCTTGATATCAGAGGTGCGAAATCGGTTTAC
GAACTTGATATGGATATCGCGGCTACTTCATTGGAAAGGCTGTATATTTC
TGATGTTCCTCTAAATGAGGAGATTACTGAAGCTATTTGTGAAAGATAGT
CTGGTTCGTTATGGGCTTTAGATATTTCGAAAACTAAAAACGATATATCG
GACGTTATTAAGATTTTACTATCGGAACCGAATTCTTGTCGTAAATTTCA
GCATCTTGATGTTAGTCAAACTAATGTTTCAAATGGTGACGTAATCTCTA
TTTTGAATTCTTGTGCTGACTTGAACACCTTGGATATCTCGTGTTGCCGT
GGTATACCACGTGGTCTGAAACGACGCCACAAAGGGCGGGAGGCGTTAGA
CAAACTATTGCTGGATTTGAAAGATGGAATGCAAGTGACTATTACTGACG
ACGACGATGAatgatttttgttaatttttttttaagatttaacgttaata
ttttattgattttgattgaaattcttctttgaatttttatatGATTTATA
TTTAGCATTTACGGCTTTAAAGATATTATATTCCCTGAAAGTTTGTCGTG
TTACAGACAGAGTGCCAGATTCGTGTTTGGAAACTTCTTAGgtattttca
tttgaaactcTACATTCCAGGCAGATTTAGATGAAGGTTATATccttttt
cctttgtttcatagaaaatacaaaaaaaaagagaaaaaatgtcaGATTTC
GTACTACTGAATATAAGTAGCACAATATCACAATATGGATCTGAGAAAAG
ATTTGCTAAAGATTTGCTCATCTCTGAGTTTAAGGGTAAATTAGAGTTGA
TCACTGGTTGTCAATCACAATGGATGAGATTGGAGCTGTATAACCAAGAC
AACGTTAAGATGGCTACCATGGATGATGAACGAATGCTGGGATTTTACTC
ACCTGAGGACCAATGGAGAGTACACGTAGTTGATACAAACCCTTCGTCAG
TGAAAGGAGAATTCGATGATTTATCCAAAGTGGAAAAGTATGAAATAAGT
GAAGATGATTATAACAACAAGAAAGACAGCGTACGAAACTTCATGCGCAT
GAACAAAGTAGGGAATTTTTCTGAAGAAGCCATCGAAGCCAAGAAACGTg
aatttgaagaagaagaaaaagaaacacaacgcgccaaaactttcaaaatc
ggTGATCGATGCGAAACGTCAGTGCCGAAACAACAAAAACGTAGAGGATG
TGTAATGTTTATTGGCGAAGTGGAATTCAAGCCAGGACATTGGATTGGTG
TAAAGTACGATGAACCTCTTGGTAAAAATGATGGAAGCGTAAAAGGTATA
CGTTATTTCACGTGTCAACAAAAATACGGAGGTTTTGTTCGGCCATCTCA
TTGTGAAGTTGGAGATTTCCCTGAAGAAGATCTTGGCTTCAGTGATGATG
AGATTGATGAAATGTAAATAACGCCATCCCGCCCCTGAGAAGCAGCACCC
TAACGCCTTCTGGCAAGTTAGAATTGCGCCTAGGAAGATGTACGGATAAA
TATTTTATATCGAAAATGGAAATTCTACGCCGATACAATTTTAACAATAG
TTGGGAGTtaagaaatagaaaattctTGTCACGTGTGAATCGGAGATGCA
ATGGTATTATTGAATGTTATGGTTTTATTGTGTCACTCACCAGAGATAAG
ATGATATGAATTCGACAGTTTGGCTTTGATTTTGTTGACAGAGATGAAGC
TGTTATTTATCAATCTGAATCTAGAAAAATAGACTTTAATCGTTTAATTT
GTGCcttgaattttaatttattgacaattagtttttttgaattctgtttt
ttattttgagacaAATGTAAATTGGTCTTTCTTGGTACCTTAAAGGTtta
gatattatattttttgaaattatcatTAGTTATGGTTATAGTTCCGTAGT
ATGATATTATCTTTTCGATTCAGATTTAGATTTATAAGAAGCATATATAT
GATAAGTATTTAAAATTTCGAAGAGATTATTCctatatttcaatatttca
aacatACACATTAATTTACGTCTAATAACTGGATGCATCGAATAAACTCC
ACTTTTCTTC
Run BLAST on NCBI

transcript from alignment at sc0001666:17954..25553+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037605 ID=TCONS_00037605|Name=TCONS_00037605|organism=Clytia hemisphaerica|type=transcript|length=7600bp|location=Sequence derived from alignment at sc0001666:17954..25553+ (Clytia hemisphaerica)
ttcagaataaaaacaaaaagattcattaaaaattataaaaaaacatgttg
aACAGTGTATATGCAGCCATCAATCAACGCACACTTGCGATAGCCGATCG
TAACCTAGCAACGTATGGCCTGAACGGACAATTGCCGTCCGATACAGACG
ACGAGGACTATATTCCATCAGGGGAACCCTCTGCCAAGACAAACAAAAGG
AAGAGAAAGATGACCAGGAAAGTGATATCAACTTCTGAGGATGAAGACGG
TGATTCCATTGAGAGTGATCATAGTGAAGAGAAGGAAGAGAAGCCAAAAG
GTTGCAATCTCGTTTTATATCTATTTTCATATTCAAATCACTTACCTAAT
TTTTCCTTATTTACATACACAAATTAAGACCTGTGTAGAATATATCGTTC
TTatttcaacaaaattttctaattttcatttcaaatgatttgcttatcaa
tatttttttgcaaatatttatttttcagcgaaaagaaagaaaaagaaact
taCACCTGGCAAGAGAAAGAAAGCGAATGCAAAGATTAAAAATGCAGATG
ACGACGAGAAACCGTCaacttcaaattcaaagaagaaaaaaggtacacgc
tttttttataagaattgtgTTTTTtgattcatcatgaatattctcaACTT
TTGGGGGGGAANAAGAATTGTGTTTTTcgattcatcatgaatattctcaa
cttttgggggaaaatcatcctgaaatattgtTATGGTAATCTTAGGTATG
AATCAAAAGCCATCCAAAATCTAGCATTTAATAcatatttggcatttttg
tggaCAAAATGTGTACTTGCGACACGCCAAAATGGGAGAAAGTACAGCTC
TCCTGTGGAGCGTCATGGTATGTTAGGTGAGCGTATAAACAATTCGACGT
TGACCCTTGTTGACCTCTTTCATGAATGTTCaataaaagtttaaaagatA
TAAAAGGGAGCTTTCCTTTGAAAGTTGCTGTCAAAGCTACTGGAAATCTA
TGTTCGtttggagtctctttaactcgaacctcaataactcgaatgtctcc
ttaactttAATAAGTGTTATGGTcttttcagttaacaatgccttttaaaa
tttgctcaataactcgaacaaaGTTGTACCTCGTGTATTATATTCTTTTA
CTGACATTGATTTCATGTTTTTAACTTAGGCGATGTAAAGAAAAAGTCAA
CATCTTCTGCTACAAAGAAAACTAAAGCAAAAGCAACCAACAACAAACCA
GATGAAGACTCTACAAGTTTGATTCAAATTTACATCGCTTTGAAATATCT
TTTGCTTTCAGCTTTCCTTTGAACTAGAGCAGTGGGCTCTATAGAATCCC
TTttgctttgcgaacacgagactcgttctccgtgcgtaaccccttttacg
attgcTTTTCTGTTGCATTTTTACCGAATATCTTATCATGACCCGCAAAC
TTACCAGTATCATAtgatatcatatttttttaaaacctATGTAGGCAGAA
ACTGTAAACAAACGTCTTTATTATTCATACAGGTACTCGTAAAAAATCGA
ACCGATCGAAGCTTTTGTTTGGAGCTGACCGTGGAAGCGATGACTCGGAA
GACGAAGATTATGTTCCAGAGGGCGGCCGTCCATCCTCCAAACCCACTGT
GAAGAAGAAAAGTAACCGCATAAACAAAAGTTTGAATcttttttccacat
tttaattGTTCAGTTGAATTGCGAAACGAAACTGTATTTTTGGTCTCTGC
GGCATTTTCTTCTTATCTGGGATTGAGACTCGtatattttcatagtttta
agACGGGTATTGTACAAATACCTAAGAAATTTCGTTCCTATTTCCTATGT
GTCTTTTAAGTGATTAGATAAAGATTCCACTCTTTATTTAATTATACATA
ATATCTTTAATGCAAAATTTCTCTCATCTCTTTTTTCAATCATGCTAATA
TACTTGCTTAACCCAGATTAACTGTGAATTAACCTTTTCACTACTACTCC
CAACGAACTGTATCTTCCTTCGTTCTTTATCATAAGGTTTTGTCTCCTCA
CGAATACTTTTCACATCATGTTTACCATAGGTGACACAAGCATTCAAAAC
AAGACTTTCAATAATGGCGGAACATCACTTGAATGNTCTCCTCACAAATA
CTTTTCACATCATGTTTATCATAGGTGACACAAGCATTCAAAACAAGACT
TTCAATAATGGTGGAACGTCACTTGAATGGGCAGAACTTCCCATCGAAAT
CTTATCGATGATATTTCGTTTCATCACAGCAACAGAATCGAAAGGTGTTC
GTTACATTCTTCGATGTTCACAAGTTTGCCAGCACTGGCGAAACGTGGTT
AACAATGAAGCCTCCTGGTTTGATATCGATCTCTCATTTGTTGGGCCCAG
CCACAAAGAACGAAAAATCACGCGAATCCTGTCTAAAATCTGTCCCATAC
AACTAGTCTGTGTTCGCTCGCTTAGCCTGAGTGGATGGTGCGAGTTGACC
GATGAGGGTCTGGATCACGTGTCTGAGAATTGCACCAAGATTGAGAAACT
GGATCTGTCGTCGTGTCAGAAAAGCGTTGCAAAGTTAACAAGTTCTTCTT
TGTTAAACATTGCTGAGAATTGTACTGAATTACAAAAGTTGAATGTTTCT
AATTTACGTGTCAACAGTTATAATCAAATATGGAGTAAATTTCTTCAAAT
ACGCGGTGCAGGACTTATCAGTATGAATTTTAGTAATAATATCCCTTTCT
CAAATACTTGTTTCAAGTTGATTACTGACAATTGTCCGTTATTGAAAATC
CTTGATTGTTCTAATACCGGTCTTAGGAGTTTATCTCTTCAAGAGTTCCA
GACGAAATGTCCGTTACTGGAAGAACTGTATTTGGCAAACGTCAATATTG
TCGTACGACGTCATAATAACGAGCTGAAAACGTGCCCTGGGTTCGACCAT
TTGTCCTTAGTCAGTTTCGCTTCACAGAATTTCAACTGCTGGGTAACAGA
TGAGGTTTTAAATGGGTTTCTCAAAAGCGCTATCAGTTTGAAAACTCTTG
ATATCAGAGGTGCGAAATCGGTTTACGAACTTGATATGGATATCGCGGCT
ACTTCATTGGAAAGGCTGTATATTTCTGATGTTCCTCTAAATGAGGAGAT
TACTGAAGCTATTTGTGAAAGATAGTCTGGTTCGTTATGGGCTTTAGATA
TTTCGAAAACTAAAAACGATATATCGGACGTTATTAAGATTTTACTATCG
GAACCGAATTCTTGTCGTAAATTTCAGCATCTTGATGTTAGTCAAACTAA
TGTTTCAAATGGTGACGTAATCTCTATTTTGAATTCTTGTGCTGACTTGA
ACACCTTGGATATCTCGTGTTGCCGTGGTATACCACGTGGTCTGAAACGA
CGCCACAAAGGGCGGGAGGCGTTAGACAAACTATTGCTGGATTTGAAAGA
TGGAATGCAAGTGACTATTACTGACGACGACGATGAatgatttttgttaa
tttttttttaagatttaacgttaatattttattgattttgattgaaattc
ttctttgaatttttatatGATTTATATTTAGCATTTACGGCTTTAAAGAT
ATTATATTCCCTGAAAGTTTGTCGTGTTACAGACAGAGTGCCAGATTCGT
GTTTGGAAACTTCTTAGgtattttcatttgaaactcTACATTCCAGGCAG
ATTTAGATGAAGGTTATATcctttttcctttgtttcatagaaaatacaaa
aaaaaagagaaaaaatgtcaGATTTCGTACTACTGAATATAAGTAGCACA
ATATCACAATATGGATCTGAGAAAAGATTTGCTAAAGATTTGCTCATCTC
TGAGTTTAAGGTGAGTTTCCAAGTTTCCGTTGAAAAACagtaaaatttat
ttgatataagtttttcttttataccTCGTCTAATTTTTGACCCACCGATT
TAAATCCTTGCGCTAGAAGTTGCTCGAATGTAGATTTCGTAGACCGGTTT
ATTTGACCACACTCGACCCTAGCCCAAATTGTGGTTTGAATCAATAGAGC
TACCTCGATTTAATTCGACGAATTTTTCTCGTTTTCAATATCTGTAACCA
GAGTGTAGACTCAATTGCGAAACGGGTCCGAAGATTCTCAATGTCTTTAC
AGGAAACTGAATATAAAGAAAGTTTACTGATCGTGTATGACTTTCACCTT
CTTACTTATTCGGCAGGGTAAATTAGAGTTGATCACTGGTTGTCAATCAC
AATGGATGAGATTGGAGCTGTATAACCAAGACAACGTTAAGATGGCTACC
ATGGATGATGAACGAATGCTGGGATTTTACTCACCTGAGGACCAATGGAG
AGTACACGTTAGTCAAATTGCTTTTATATCACAATTTAATCATGCCCCTT
GTATTACGATGAAGTGAATGCAGTCGCTCTGGTGTGGTCTTCTGACCAAT
ACTTCATTCCAACGTTGGAATCCACAAACTACTACACTTCACTAACGGAA
AGTCTTGGGCTTGCAAATATTAATGTCTGTGATCTATAGAATTCACTTCC
AGCTCTGCCGAGTCACAATTGAGTTCTCGGGTTCCACATGGACCtgtagc
tcaatggtagagcaaataCCCGCTTATGGAATGGTTGTCAGTTCGAGTCA
CGTCGaatccgttggttttccaacgttTCTGGTGGCTGGTAAGAAGACAA
CATGAGATCGACTGTATATTCACTTCATTAAATAACAATTTGATTTTGCC
TTATTCAATGCTTTCGTGGTCTCACTTAGCCAAACTTTTGTGTGATTATT
ATGCTTCAACAATAAATTAGATAAAAAGTGGGGGAATTTAGGACTTTTTG
TCTCCATCATTCAGTATCCGTTCTGTTTTCGCCAGAAGAGAAGACAAATA
GAATCGTATTCCCTTCAATCTCTTTCTCAGTTCACTTGTTTCTGTTTTAT
CCCACTCGATCATATGAACATTTGTTTTTCGTAGTTTCCCGGGAACAAAG
AGTCTTGAACATTGGTcaattcgaaaatattttttgaacacTATTTTATA
GACTTTCATCgcaatatttttcacttttctagGTAGTTGATACAAACCCT
TCGTCAGTGAAAGGAGAATTCGATGATTTATCCAAAGTGGAAAAGTATGA
AATAAGTGAAGATGATTATAACAACAAGAAAGGTATAAAATGAACTTCAT
TTCATGGACTTGTAATTTCCACACTATACCCATTTAAACTAACTGTAATT
CGACATAATTTTCCACAACTCGATTTTCTGTCAATCGATGCTCATATCAC
GATGGATCTGTACATAATATAATTTGCAACCTTCTCAGAAGGTTAGAAAG
CATAATTAGTAGCAAATTATGACGTCCTATATTAAGAAGCCAATGAATTT
ATTACTTTCCCTTTCATTTTCAGACAGCGTACGAAACTTCATGCGCATGA
ACAAAGTAGGGAATTTTTCTGAAGAAGCCATCGAAGCCAAGAAACGTgaa
tttgaagaagaagaaaaagaaacacaacgcgccaaaactttcaaaatcgg
TGATCGATGCGAAACGTCAGTGCCGAAACAACAAAAACGTAGAGGATGTG
TAATGTTTATTGGTGAGTCGTTTAAGTTTCCCAATCATATACCGattcat
ttattcattcattcattcattcattcattcattcattcgcaCACAATAAC
CCGAGCTCTGATAAAACTCTGATAAGACTTTGACCCGGATTCGATTTCTT
TCTTTGGTTAAACTCATGACTACTGTGATTTTGAATACAAAAGGATAACA
TATGGCGATTTCTTGAAAATGATATGACGgggtaacttttttgtttcctt
ACCTTAGGCGAAGTGGAATTCAAGCCAGGACATTGGATTGGTGTAAAGTA
CGATGAACCTCTTGGTAAAAATGATGGAAGGTATTcaataaaagattttt
cataaaatatccCTTGATTCATATTTTGAAGTAAATTCTATCGAACAATA
TCGATCATTATCGTCCACCTCTAAGCAAAACGCactgtcgaatattttta
gatatccgatagtaaaatatctcttttgtagcagcgagcataaagaaaat
agttttttggtataattatttaaatgtcacaaatataaaaacagataaaa
gaaagttctttttaacaaaagagaaagaaaggaaattcgaacgtttttta
attaaagagagaaaaaaaaacaatgaaattgacatcCTTAATAAGatagt
aaaacgttcgaaaatgttATACAAAGAGAGAAACAGGAGAAAGACTGAAT
GAAGTAGGGGAAATTAAAATGCTTTTCTGCTAATTGGTGAACGATAAACC
ATATATTCAAcgtgaaaaatcggatatcgaaattaTTCAGTCTCGCTTAA
TGATATTCGACTCAGCTTCGCTTCgtcgaatatcatcaagctcgactgaa
taattttcgatatccgatttttcttgtcgaatatctgcttaatacNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATAT
CAAATTCGGAGTGGAAAATCGGGACATGTTTTAAAATCACTGTTTGGATA
AATAACTTTTATTCTTAATCTAGTATTTATTCCCTCTGCTCACAGCGTAA
AAGGGAAACGCTACTATCGAACAATATCTACAAAGAGAGTATTTTTAGTT
CAAGAATTGGGAAATTTTTCACCATGATTCTAAATCACTCTTTTATTCCT
AATGAATTAATTTCGCTCTTTTCTCAGCGTAAAAGGTATACGTTATTTCA
CGTGTCAACAAAAATACGGAGGTTTTGTTCGGCCATCTCATTGTGAAGTT
GGAGATTTCCCTGAAGAAGATCTTGGCTTCAGTGATGATGAGATTGATGA
AATGTAAATAACGCCATCCCGCCCCTGAGAAGCAGCACCCTAACGCCTTC
TGGCAAGTTAGAATTGCGCCTAGGAAGATGTACGGATAAATATTTTATAT
CGAAAATGGAAATTCTACGCCGATACAATTTTAACAATAGTTGGGAGTta
agaaatagaaaattctTGTCACGTGTGAATCGGAGATGCAATGGTATTAT
TGAATGTTATGGTTTTATTGTGTCACTCACCAGAGATAAGATGATATGAA
TTCGACAGTTTGGCTTTGATTTTGTTGACAGAGATGAAGCTGTTATTTAT
CAATCTGAATCTAGAAAAATAGACTTTAATCGTTTAATTTGTGCcttgaa
ttttaatttattgacaattagtttttttgaattctgttttttattttgag
acaAATGTAAATTGGTCTTTCTTGGTACCTTAAAGGTttagatattatat
tttttgaaattatcatTAGTTATGGTTATAGTTCCGTAGTATGATATTAT
CTTTTCGATTCAGATTTAGATTTATAAGAAGCATATATATGATAAGTATT
TAAAATTTCGAAGAGATTATTCctatatttcaatatttcaaacatACACA
TTAATTTACGTCTAATAACTGGATGCATCGAATAAACTCCACTTTTCTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022359XLOC_022359Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037605-exon-sc0001666-1491911889:17954..18253TCONS_00037605-exon-sc0001666-1491911889:17954..18253Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1510915933:17954..18253TCONS_00037605-exon-sc0001666-1510915933:17954..18253Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1575043694:17954..18253TCONS_00037605-exon-sc0001666-1575043694:17954..18253Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1491911889:18432..18545TCONS_00037605-exon-sc0001666-1491911889:18432..18545Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1510915933:18432..18545TCONS_00037605-exon-sc0001666-1510915933:18432..18545Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1575043694:18432..18545TCONS_00037605-exon-sc0001666-1575043694:18432..18545Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1491911889:19133..19219TCONS_00037605-exon-sc0001666-1491911889:19133..19219Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1510915933:19133..19219TCONS_00037605-exon-sc0001666-1510915933:19133..19219Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1575043694:19133..19219TCONS_00037605-exon-sc0001666-1575043694:19133..19219Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1491911889:19486..19632TCONS_00037605-exon-sc0001666-1491911889:19486..19632Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1510915933:19486..19632TCONS_00037605-exon-sc0001666-1510915933:19486..19632Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1575043694:19486..19632TCONS_00037605-exon-sc0001666-1575043694:19486..19632Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1491911889:20128..21813TCONS_00037605-exon-sc0001666-1491911889:20128..21813Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1510915933:20128..21813TCONS_00037605-exon-sc0001666-1510915933:20128..21813Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1575043694:20128..21813TCONS_00037605-exon-sc0001666-1575043694:20128..21813Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1491911889:22170..22310TCONS_00037605-exon-sc0001666-1491911889:22170..22310Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1510915933:22170..22310TCONS_00037605-exon-sc0001666-1510915933:22170..22310Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1575043694:22170..22310TCONS_00037605-exon-sc0001666-1575043694:22170..22310Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1491911889:23036..23135TCONS_00037605-exon-sc0001666-1491911889:23036..23135Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1510915933:23036..23135TCONS_00037605-exon-sc0001666-1510915933:23036..23135Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1575043694:23036..23135TCONS_00037605-exon-sc0001666-1575043694:23036..23135Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1491911889:23377..23565TCONS_00037605-exon-sc0001666-1491911889:23377..23565Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1510915933:23377..23565TCONS_00037605-exon-sc0001666-1510915933:23377..23565Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1575043694:23377..23565TCONS_00037605-exon-sc0001666-1575043694:23377..23565Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1491911889:23811..23883TCONS_00037605-exon-sc0001666-1491911889:23811..23883Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1510915933:23811..23883TCONS_00037605-exon-sc0001666-1510915933:23811..23883Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1575043694:23811..23883TCONS_00037605-exon-sc0001666-1575043694:23811..23883Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1491911889:24781..25553TCONS_00037605-exon-sc0001666-1491911889:24781..25553Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1510915933:24781..25553TCONS_00037605-exon-sc0001666-1510915933:24781..25553Clytia hemisphaericaexon
TCONS_00037605-exon-sc0001666-1575043694:24781..25553TCONS_00037605-exon-sc0001666-1575043694:24781..25553Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001666supercontigsc0001666:17954..25553 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.62632	8.73299	7.29383	0.866413	7.66942	6.1773	6.95502	12.21	13.0132	8.82992	4.4023	12.5332	8.80759	12.2359	10.1288	10.7376	11.6871	9.98122	0.921132	6.03545	0.559653	0.209453	24.7245	18.7129	21.2785	19.3003	0.00870617	9.23289	3.07973	10.6037
Blast
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BLAST of TCONS_00037605 vs. Swiss-Prot (Human)
Match: TBCB (Tubulin-folding cofactor B OS=Homo sapiens GN=TBCB PE=1 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 8.717e-62
Identity = 111/237 (46.84%), Postives = 163/237 (68.78%), Query Frame = 1 
Query: 2251 VLLNISSTISQYGSEKRFAKDLLISEFKGKLELITGCQSQWMRLELYNQDNVKMATMDDE-RMLGFYSPEDQWRVHVVDTNPSSVKGEFDDLSKVEKYEISEDDYNNKKDSVRNFMRMNKVGNFSXXXXXXXXXXXXXXXXXTQ-RAKTFKIGDRCETSVPKQQKRRGCVMFIGEVEFKPGHWIGVKYDEPLGKNDGSVKGIRYFTCQQKYGGFVRPSHCEVGDFPEEDLGFSDDEI 2955
            V + ISS+++ + SEKR+++ L I+EFK KLEL+ G  +  M LELY  D+   + +D E  +LG Y  +D  R+HV+D + + + GE++D+S+VEKY IS++ Y+ ++D+VR+F++ +K+G ++EE    ++ E  +   E + +A +  +G RCE     Q  RRG VM++G  +FKPG+WIGV+YDEPLGKNDGSV G RYF CQ KYG FV+P+   VGDFPEED G   DEI
Sbjct:   11 VTVFISSSLNTFRSEKRYSRSLTIAEFKCKLELLVGSPASCMELELYGVDDKFYSKLDQEDALLGSYPVDDGCRIHVIDHSGARL-GEYEDVSRVEKYTISQEAYDQRQDTVRSFLKRSKLGRYNEEERAQQEAEAAQRLAEEKAQASSIPVGSRCEVRAAGQSPRRGTVMYVGLTDFKPGYWIGVRYDEPLGKNDGSVNGKRYFECQAKYGAFVKPAVVTVGDFPEEDYGL--DEI 244
The following BLAST results are available for this feature:
BLAST of TCONS_00037605 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBCB8.717e-6246.84Tubulin-folding cofactor B OS=Homo sapiens GN=TBCB... [more]
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