TCONS_00037604 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037604
Unique NameTCONS_00037604
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3619

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037604 ID=TCONS_00037604|Name=TCONS_00037604|organism=Clytia hemisphaerica|type=transcript|length=3619bp
attctttcattcagaataaaaacaaaaagattcattaaaaattataaaaa
aacatgttgaACAGTGTATATGCAGCCATCAATCAACGCACACTTGCGAT
AGCCGATCGTAACCTAGCAACGTATGGCCTGAACGGACAATTGCCGTCCG
ATACAGACGACGAGGACTATATTCCATCAGGGGAACCCTCTGCCAAGACA
AACAAAAGGAAGAGAAAGATGACCAGGAAAGTGATATCAACTTCTGAGGA
TGAAGACGGTGATTCCATTGAGAGTGATCATAGTGAAGAGAAGGAAGAGA
AGCCAAAAGcgaaaagaaagaaaaagaaacttaCACCTGGCAAGAGAAAG
AAAGCGAATGCAAAGATTAAAAATGCAGATGACGACGAGAAACCGTCaac
ttcaaattcaaagaagaaaaaagGCGATGTAAAGAAAAAGTCAACATCTT
CTGCTACAAAGAAAACTAAAGCAAAAGCAACCAACAACAAACCAGATGAA
GACTCTACAAGTACTCGTAAAAAATCGAACCGATCGAAGCTTTTGTTTGG
AGCTGACCGTGGAAGCGATGACTCGGAAGACGAAGATTATGTTCCAGAGG
GCGGCCGTCCATCCTCCAAACCCACTGTGAAGAAGAAAAGTAACCGCATA
AACAAAAGTGACACAAGCATTCAAAACAAGACTTTCAATAATGGCGGAAC
GTCACTTGAATGGGCAGAACTTCCCATCGAAATCTTATCGATGATATTTC
GTTTCATCACAGCAACAGAATCGAAAGGTGTTCGTTACATTCTTCGATGT
TCACAAGTTTGCCAGCACTGGCGAAACGTGGTTAACAATGAAGCCTCCTG
GTTTGATATCGATCTCTCATTTGTTGGGCCCAGCCACAAAGAACGAAAAA
TCACGCGAATCCTGTCTAAAATCTGTCCCATACAACTAGTCTGTGTTCGC
TCGCTTAGCCTGAGTGGATGGTGCGAGTTGACCGATGAGGGTCTGGATCA
CGTGTCTGAGAATTGCACCAAGATTGAGAAACTGGATCTGTCGTCGTGTC
AGAAAAGCGTTGCAAAGTTAACAAGTTCTTCTTTGTTAAACATTGCTGAG
AATTGTACTGAATTACAAAAGTTGAATGTTTCTAATTTACGTGTCAACAG
TTATAATCAAATATGGAGTAAATTTCTTCAAATACGCGGTGCAGGACTTA
TCAGTATGAATTTTAGTAATAATATCCCTTTCTCAAATACTTGTTTCAAG
TTGATTACTGACAATTGTCCGTTATTGAAAATCCTTGATTGTTCTAATAC
CGGTCTTAGGAGTTTATCTCTTCAAGAGTTCCAGACGAAATGTCCGTTAC
TGGAAGAACTGTATTTGGCAAACGTCAATATTGTCGTACGACGTCATAAT
AACGAGCTGAAAACGTGCCCTGGGTTCGACCATTTGTCCTTAGTCAGTTT
CGCTTCACAGAATTTCAACTGCTGGGTAACAGATGAGGTTTTAAATGGGT
TTCTCAAAAGCGCTATCAGTTTGAAAACTCTTGATATCAGAGGTGCGAAA
TCGGTTTACGAACTTGATATGGATATCGCGGCTACTTCATTGGAAAGGCT
GTATATTTCTGATGTTCCTCTAAATGAGGAGATTACTGAAGCTATTTGTG
AAAGATAGTCTGGTTCGTTATGGGCTTTAGATATTTCGAAAACTAAAAAC
GATATATCGGACGTTATTAAGATTTTACTATCGGAACCGAATTCTTGTCG
TAAATTTCAGCATCTTGATGTTAGTCAAACTAATGTTTCAAATGGTGACG
TAATCTCTATTTTGAATTCTTGTGCTGACTTGAACACCTTGGATATCTCG
TGTTGCCGTGGTATACCACGTGGTCTGAAACGACGCCACAAAGGGCGGGA
GGCGTTAGACAAACTATTGCTGGATTTGAAAGATGGAATGCAAGTGACTA
TTACTGACGACGACGATGAatgatttttgttaatttttttttaagattta
acgttaatattttattgattttgattgaaattcttctttgaatttttata
tGATTTATATTTAGCATTTACGGCTTTAAAGATATTATATTCCCTGAAAG
TTTGTCGTGTTACAGACAGAGTGCCAGATTCGTGTTTGGAAACTTCTTAG
gtattttcatttgaaactcTACATTCCAGGCAGATTTAGATGAAGGTTAT
ATcctttttcctttgtttcatagaaaatacaaaaaaaaagagaaaaaatg
tcaGATTTCGTACTACTGAATATAAGTAGCACAATATCACAATATGGATC
TGAGAAAAGATTTGCTAAAGATTTGCTCATCTCTGAGTTTAAGGGTAAAT
TAGAGTTGATCACTGGTTGTCAATCACAATGGATGAGATTGGAGCTGTAT
AACCAAGACAACGTTAAGATGGCTACCATGGATGATGAACGAATGCTGGG
ATTTTACTCACCTGAGGACCAATGGAGAGTACACGTAGTTGATACAAACC
CTTCGTCAGTGAAAGGAGAATTCGATGATTTATCCAAAGTGGAAAAGTAT
GAAATAAGTGAAGATGATTATAACAACAAGAAAGACAGCGTACGAAACTT
CATGCGCATGAACAAAGTAGGGAATTTTTCTGAAGAAGCCATCGAAGCCA
AGAAACGTgaatttgaagaagaagaaaaagaaacacaacgcgccaaaact
ttcaaaatcggTGATCGATGCGAAACGTCAGTGCCGAAACAACAAAAACG
TAGAGGATGTGTAATGTTTATTGGCGAAGTGGAATTCAAGCCAGGACATT
GGATTGGTGTAAAGTACGATGAACCTCTTGGTAAAAATGATGGAAGCGTA
AAAGGTATACGTTATTTCACGTGTCAACAAAAATACGGAGGTTTTGTTCG
GCCATCTCATTGTGAAGTTGGAGATTTCCCTGAAGAAGATCTTGGCTTCA
GTGATGATGAGATTGATGAAATGTAAATAACGCCATCCCGCCCCTGAGAA
GCAGCACCCTAACGCCTTCTGGCAAGTTAGAATTGCGCCTAGGAAGATGT
ACGGATAAATATTTTATATCGAAAATGGAAATTCTACGCCGATACAATTT
TAACAATAGTTGGGAGTtaagaaatagaaaattctTGTCACGTGTGAATC
GGAGATGCAATGGTATTATTGAATGTTATGGTTTTATTGTGTCACTCACC
AGAGATAAGATGATATGAATTCGACAGTTTGGCTTTGATTTTGTTGACAG
AGATGAAGCTGTTATTTATCAATCTGAATCTAGAAAAATAGACTTTAATC
GTTTAATTTGTGCcttgaattttaatttattgacaattagtttttttgaa
ttctgttttttattttgagacaAATGTAAATTGGTCTTTCTTGGTACCTT
AAAGGTttagatattatattttttgaaattatcatTAGTTATGGTTATAG
TTCCGTAGTATGATATTATCTTTTCGATTCAGATTTAGATTTATAAGAAG
CATATATATGATAAGTATTTAAAATTTCGAAGAGATTATTCctatatttc
aatatttcaaacatACACATTAATTTACGTCTAATAACTGGATGCATCGA
ATAAACTCCACTTTTCTTC
Run BLAST on NCBI

protein sequence of TCONS_00037604-protein

>TCONS_00037604-protein ID=TCONS_00037604-protein|Name=TCONS_00037604-protein|organism=Clytia hemisphaerica|type=polypeptide|length=534bp
MLNSVYAAINQRTLAIADRNLATYGLNGQLPSDTDDEDYIPSGEPSAKTN
KRKRKMTRKVISTSEDEDGDSIESDHSEEKEEKPKAKRKKKKLTPGKRKK
ANAKIKNADDDEKPSTSNSKKKKGDVKKKSTSSATKKTKAKATNNKPDED
STSTRKKSNRSKLLFGADRGSDDSEDEDYVPEGGRPSSKPTVKKKSNRIN
KSDTSIQNKTFNNGGTSLEWAELPIEILSMIFRFITATESKGVRYILRCS
QVCQHWRNVVNNEASWFDIDLSFVGPSHKERKITRILSKICPIQLVCVRS
LSLSGWCELTDEGLDHVSENCTKIEKLDLSSCQKSVAKLTSSSLLNIAEN
CTELQKLNVSNLRVNSYNQIWSKFLQIRGAGLISMNFSNNIPFSNTCFKL
ITDNCPLLKILDCSNTGLRSLSLQEFQTKCPLLEELYLANVNIVVRRHNN
ELKTCPGFDHLSLVSFASQNFNCWVTDEVLNGFLKSAISLKTLDIRGAKS
VYELDMDIAATSLERLYISDVPLNEEITEAICER
Run BLAST on NCBI

transcript from alignment at sc0001666:17945..25553+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037604 ID=TCONS_00037604|Name=TCONS_00037604|organism=Clytia hemisphaerica|type=transcript|length=7609bp|location=Sequence derived from alignment at sc0001666:17945..25553+ (Clytia hemisphaerica)
attctttcattcagaataaaaacaaaaagattcattaaaaattataaaaa
aacatgttgaACAGTGTATATGCAGCCATCAATCAACGCACACTTGCGAT
AGCCGATCGTAACCTAGCAACGTATGGCCTGAACGGACAATTGCCGTCCG
ATACAGACGACGAGGACTATATTCCATCAGGGGAACCCTCTGCCAAGACA
AACAAAAGGAAGAGAAAGATGACCAGGAAAGTGATATCAACTTCTGAGGA
TGAAGACGGTGATTCCATTGAGAGTGATCATAGTGAAGAGAAGGAAGAGA
AGCCAAAAGGTTGCAATCTCGTTTTATATCTATTTTCATATTCAAATCAC
TTACCTAATTTTTCCTTATTTACATACACAAATTAAGACCTGTGTAGAAT
ATATCGTTCTTatttcaacaaaattttctaattttcatttcaaatgattt
gcttatcaatatttttttgcaaatatttatttttcagcgaaaagaaagaa
aaagaaacttaCACCTGGCAAGAGAAAGAAAGCGAATGCAAAGATTAAAA
ATGCAGATGACGACGAGAAACCGTCaacttcaaattcaaagaagaaaaaa
ggtacacgctttttttataagaattgtgTTTTTtgattcatcatgaatat
tctcaACTTTTGGGGGGGAANAAGAATTGTGTTTTTcgattcatcatgaa
tattctcaacttttgggggaaaatcatcctgaaatattgtTATGGTAATC
TTAGGTATGAATCAAAAGCCATCCAAAATCTAGCATTTAATAcatatttg
gcatttttgtggaCAAAATGTGTACTTGCGACACGCCAAAATGGGAGAAA
GTACAGCTCTCCTGTGGAGCGTCATGGTATGTTAGGTGAGCGTATAAACA
ATTCGACGTTGACCCTTGTTGACCTCTTTCATGAATGTTCaataaaagtt
taaaagatATAAAAGGGAGCTTTCCTTTGAAAGTTGCTGTCAAAGCTACT
GGAAATCTATGTTCGtttggagtctctttaactcgaacctcaataactcg
aatgtctccttaactttAATAAGTGTTATGGTcttttcagttaacaatgc
cttttaaaatttgctcaataactcgaacaaaGTTGTACCTCGTGTATTAT
ATTCTTTTACTGACATTGATTTCATGTTTTTAACTTAGGCGATGTAAAGA
AAAAGTCAACATCTTCTGCTACAAAGAAAACTAAAGCAAAAGCAACCAAC
AACAAACCAGATGAAGACTCTACAAGTTTGATTCAAATTTACATCGCTTT
GAAATATCTTTTGCTTTCAGCTTTCCTTTGAACTAGAGCAGTGGGCTCTA
TAGAATCCCTTttgctttgcgaacacgagactcgttctccgtgcgtaacc
ccttttacgattgcTTTTCTGTTGCATTTTTACCGAATATCTTATCATGA
CCCGCAAACTTACCAGTATCATAtgatatcatatttttttaaaacctATG
TAGGCAGAAACTGTAAACAAACGTCTTTATTATTCATACAGGTACTCGTA
AAAAATCGAACCGATCGAAGCTTTTGTTTGGAGCTGACCGTGGAAGCGAT
GACTCGGAAGACGAAGATTATGTTCCAGAGGGCGGCCGTCCATCCTCCAA
ACCCACTGTGAAGAAGAAAAGTAACCGCATAAACAAAAGTTTGAATcttt
tttccacattttaattGTTCAGTTGAATTGCGAAACGAAACTGTATTTTT
GGTCTCTGCGGCATTTTCTTCTTATCTGGGATTGAGACTCGtatattttc
atagttttaagACGGGTATTGTACAAATACCTAAGAAATTTCGTTCCTAT
TTCCTATGTGTCTTTTAAGTGATTAGATAAAGATTCCACTCTTTATTTAA
TTATACATAATATCTTTAATGCAAAATTTCTCTCATCTCTTTTTTCAATC
ATGCTAATATACTTGCTTAACCCAGATTAACTGTGAATTAACCTTTTCAC
TACTACTCCCAACGAACTGTATCTTCCTTCGTTCTTTATCATAAGGTTTT
GTCTCCTCACGAATACTTTTCACATCATGTTTACCATAGGTGACACAAGC
ATTCAAAACAAGACTTTCAATAATGGCGGAACATCACTTGAATGNTCTCC
TCACAAATACTTTTCACATCATGTTTATCATAGGTGACACAAGCATTCAA
AACAAGACTTTCAATAATGGTGGAACGTCACTTGAATGGGCAGAACTTCC
CATCGAAATCTTATCGATGATATTTCGTTTCATCACAGCAACAGAATCGA
AAGGTGTTCGTTACATTCTTCGATGTTCACAAGTTTGCCAGCACTGGCGA
AACGTGGTTAACAATGAAGCCTCCTGGTTTGATATCGATCTCTCATTTGT
TGGGCCCAGCCACAAAGAACGAAAAATCACGCGAATCCTGTCTAAAATCT
GTCCCATACAACTAGTCTGTGTTCGCTCGCTTAGCCTGAGTGGATGGTGC
GAGTTGACCGATGAGGGTCTGGATCACGTGTCTGAGAATTGCACCAAGAT
TGAGAAACTGGATCTGTCGTCGTGTCAGAAAAGCGTTGCAAAGTTAACAA
GTTCTTCTTTGTTAAACATTGCTGAGAATTGTACTGAATTACAAAAGTTG
AATGTTTCTAATTTACGTGTCAACAGTTATAATCAAATATGGAGTAAATT
TCTTCAAATACGCGGTGCAGGACTTATCAGTATGAATTTTAGTAATAATA
TCCCTTTCTCAAATACTTGTTTCAAGTTGATTACTGACAATTGTCCGTTA
TTGAAAATCCTTGATTGTTCTAATACCGGTCTTAGGAGTTTATCTCTTCA
AGAGTTCCAGACGAAATGTCCGTTACTGGAAGAACTGTATTTGGCAAACG
TCAATATTGTCGTACGACGTCATAATAACGAGCTGAAAACGTGCCCTGGG
TTCGACCATTTGTCCTTAGTCAGTTTCGCTTCACAGAATTTCAACTGCTG
GGTAACAGATGAGGTTTTAAATGGGTTTCTCAAAAGCGCTATCAGTTTGA
AAACTCTTGATATCAGAGGTGCGAAATCGGTTTACGAACTTGATATGGAT
ATCGCGGCTACTTCATTGGAAAGGCTGTATATTTCTGATGTTCCTCTAAA
TGAGGAGATTACTGAAGCTATTTGTGAAAGATAGTCTGGTTCGTTATGGG
CTTTAGATATTTCGAAAACTAAAAACGATATATCGGACGTTATTAAGATT
TTACTATCGGAACCGAATTCTTGTCGTAAATTTCAGCATCTTGATGTTAG
TCAAACTAATGTTTCAAATGGTGACGTAATCTCTATTTTGAATTCTTGTG
CTGACTTGAACACCTTGGATATCTCGTGTTGCCGTGGTATACCACGTGGT
CTGAAACGACGCCACAAAGGGCGGGAGGCGTTAGACAAACTATTGCTGGA
TTTGAAAGATGGAATGCAAGTGACTATTACTGACGACGACGATGAatgat
ttttgttaatttttttttaagatttaacgttaatattttattgattttga
ttgaaattcttctttgaatttttatatGATTTATATTTAGCATTTACGGC
TTTAAAGATATTATATTCCCTGAAAGTTTGTCGTGTTACAGACAGAGTGC
CAGATTCGTGTTTGGAAACTTCTTAGgtattttcatttgaaactcTACAT
TCCAGGCAGATTTAGATGAAGGTTATATcctttttcctttgtttcataga
aaatacaaaaaaaaagagaaaaaatgtcaGATTTCGTACTACTGAATATA
AGTAGCACAATATCACAATATGGATCTGAGAAAAGATTTGCTAAAGATTT
GCTCATCTCTGAGTTTAAGGTGAGTTTCCAAGTTTCCGTTGAAAAACagt
aaaatttatttgatataagtttttcttttataccTCGTCTAATTTTTGAC
CCACCGATTTAAATCCTTGCGCTAGAAGTTGCTCGAATGTAGATTTCGTA
GACCGGTTTATTTGACCACACTCGACCCTAGCCCAAATTGTGGTTTGAAT
CAATAGAGCTACCTCGATTTAATTCGACGAATTTTTCTCGTTTTCAATAT
CTGTAACCAGAGTGTAGACTCAATTGCGAAACGGGTCCGAAGATTCTCAA
TGTCTTTACAGGAAACTGAATATAAAGAAAGTTTACTGATCGTGTATGAC
TTTCACCTTCTTACTTATTCGGCAGGGTAAATTAGAGTTGATCACTGGTT
GTCAATCACAATGGATGAGATTGGAGCTGTATAACCAAGACAACGTTAAG
ATGGCTACCATGGATGATGAACGAATGCTGGGATTTTACTCACCTGAGGA
CCAATGGAGAGTACACGTTAGTCAAATTGCTTTTATATCACAATTTAATC
ATGCCCCTTGTATTACGATGAAGTGAATGCAGTCGCTCTGGTGTGGTCTT
CTGACCAATACTTCATTCCAACGTTGGAATCCACAAACTACTACACTTCA
CTAACGGAAAGTCTTGGGCTTGCAAATATTAATGTCTGTGATCTATAGAA
TTCACTTCCAGCTCTGCCGAGTCACAATTGAGTTCTCGGGTTCCACATGG
ACCtgtagctcaatggtagagcaaataCCCGCTTATGGAATGGTTGTCAG
TTCGAGTCACGTCGaatccgttggttttccaacgttTCTGGTGGCTGGTA
AGAAGACAACATGAGATCGACTGTATATTCACTTCATTAAATAACAATTT
GATTTTGCCTTATTCAATGCTTTCGTGGTCTCACTTAGCCAAACTTTTGT
GTGATTATTATGCTTCAACAATAAATTAGATAAAAAGTGGGGGAATTTAG
GACTTTTTGTCTCCATCATTCAGTATCCGTTCTGTTTTCGCCAGAAGAGA
AGACAAATAGAATCGTATTCCCTTCAATCTCTTTCTCAGTTCACTTGTTT
CTGTTTTATCCCACTCGATCATATGAACATTTGTTTTTCGTAGTTTCCCG
GGAACAAAGAGTCTTGAACATTGGTcaattcgaaaatattttttgaacac
TATTTTATAGACTTTCATCgcaatatttttcacttttctagGTAGTTGAT
ACAAACCCTTCGTCAGTGAAAGGAGAATTCGATGATTTATCCAAAGTGGA
AAAGTATGAAATAAGTGAAGATGATTATAACAACAAGAAAGGTATAAAAT
GAACTTCATTTCATGGACTTGTAATTTCCACACTATACCCATTTAAACTA
ACTGTAATTCGACATAATTTTCCACAACTCGATTTTCTGTCAATCGATGC
TCATATCACGATGGATCTGTACATAATATAATTTGCAACCTTCTCAGAAG
GTTAGAAAGCATAATTAGTAGCAAATTATGACGTCCTATATTAAGAAGCC
AATGAATTTATTACTTTCCCTTTCATTTTCAGACAGCGTACGAAACTTCA
TGCGCATGAACAAAGTAGGGAATTTTTCTGAAGAAGCCATCGAAGCCAAG
AAACGTgaatttgaagaagaagaaaaagaaacacaacgcgccaaaacttt
caaaatcggTGATCGATGCGAAACGTCAGTGCCGAAACAACAAAAACGTA
GAGGATGTGTAATGTTTATTGGTGAGTCGTTTAAGTTTCCCAATCATATA
CCGattcatttattcattcattcattcattcattcattcattcattcgca
CACAATAACCCGAGCTCTGATAAAACTCTGATAAGACTTTGACCCGGATT
CGATTTCTTTCTTTGGTTAAACTCATGACTACTGTGATTTTGAATACAAA
AGGATAACATATGGCGATTTCTTGAAAATGATATGACGgggtaacttttt
tgtttccttACCTTAGGCGAAGTGGAATTCAAGCCAGGACATTGGATTGG
TGTAAAGTACGATGAACCTCTTGGTAAAAATGATGGAAGGTATTcaataa
aagatttttcataaaatatccCTTGATTCATATTTTGAAGTAAATTCTAT
CGAACAATATCGATCATTATCGTCCACCTCTAAGCAAAACGCactgtcga
atatttttagatatccgatagtaaaatatctcttttgtagcagcgagcat
aaagaaaatagttttttggtataattatttaaatgtcacaaatataaaaa
cagataaaagaaagttctttttaacaaaagagaaagaaaggaaattcgaa
cgttttttaattaaagagagaaaaaaaaacaatgaaattgacatcCTTAA
TAAGatagtaaaacgttcgaaaatgttATACAAAGAGAGAAACAGGAGAA
AGACTGAATGAAGTAGGGGAAATTAAAATGCTTTTCTGCTAATTGGTGAA
CGATAAACCATATATTCAAcgtgaaaaatcggatatcgaaattaTTCAGT
CTCGCTTAATGATATTCGACTCAGCTTCGCTTCgtcgaatatcatcaagc
tcgactgaataattttcgatatccgatttttcttgtcgaatatctgctta
atacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNAATATCAAATTCGGAGTGGAAAATCGGGACATGTTTTAAAATCACT
GTTTGGATAAATAACTTTTATTCTTAATCTAGTATTTATTCCCTCTGCTC
ACAGCGTAAAAGGGAAACGCTACTATCGAACAATATCTACAAAGAGAGTA
TTTTTAGTTCAAGAATTGGGAAATTTTTCACCATGATTCTAAATCACTCT
TTTATTCCTAATGAATTAATTTCGCTCTTTTCTCAGCGTAAAAGGTATAC
GTTATTTCACGTGTCAACAAAAATACGGAGGTTTTGTTCGGCCATCTCAT
TGTGAAGTTGGAGATTTCCCTGAAGAAGATCTTGGCTTCAGTGATGATGA
GATTGATGAAATGTAAATAACGCCATCCCGCCCCTGAGAAGCAGCACCCT
AACGCCTTCTGGCAAGTTAGAATTGCGCCTAGGAAGATGTACGGATAAAT
ATTTTATATCGAAAATGGAAATTCTACGCCGATACAATTTTAACAATAGT
TGGGAGTtaagaaatagaaaattctTGTCACGTGTGAATCGGAGATGCAA
TGGTATTATTGAATGTTATGGTTTTATTGTGTCACTCACCAGAGATAAGA
TGATATGAATTCGACAGTTTGGCTTTGATTTTGTTGACAGAGATGAAGCT
GTTATTTATCAATCTGAATCTAGAAAAATAGACTTTAATCGTTTAATTTG
TGCcttgaattttaatttattgacaattagtttttttgaattctgttttt
tattttgagacaAATGTAAATTGGTCTTTCTTGGTACCTTAAAGGTttag
atattatattttttgaaattatcatTAGTTATGGTTATAGTTCCGTAGTA
TGATATTATCTTTTCGATTCAGATTTAGATTTATAAGAAGCATATATATG
ATAAGTATTTAAAATTTCGAAGAGATTATTCctatatttcaatatttcaa
acatACACATTAATTTACGTCTAATAACTGGATGCATCGAATAAACTCCA
CTTTTCTTC

Coding sequence (CDS) from alignment at sc0001666:17945..25553+

>TCONS_00037604 ID=TCONS_00037604|Name=TCONS_00037604|organism=Clytia hemisphaerica|type=CDS|length=9630bp|location=Sequence derived from alignment at sc0001666:17945..25553+ (Clytia hemisphaerica)
atgttgaACAGTGTATATGCAGCCATCAATCAACGCACACTTGCGATAGC
CGATCGTAACCTAGCAACGTATGGCCTGAACGGACAATTGCCGTCCGATA
CAGACGACGAGGACTATATTCCATCAGGGGAACCCTCTGCCAAGACAAAC
AAAAGGAAGAGAAAGATGACCAGGAAAGTGATATCAACTTCTGAGGATGA
AGACGGTGATTCCATTGAGAGTGATCATAGTGAAGAGAAGGAAGAGAAGC
CAAAAGcgaaaagaaagaaaaagaaacttaCACCTGGCAAGAGAAAGAAA
GCGAATGCAAAGATTAAAAATGCAGATGACGACGAGAAACCGTCaacttc
aaattcaaagaagaaaaaagGCGATGTAAAGAAAAAGTCAACATCTTCTG
CTACAAAGAAAACTAAAGCAAAAGCAACCAACAACAAACCAGATGAAGAC
TCTACAAGTACTCGTAAAAAATCGAACCGATCGAAGCTTTTGTTTGGAGC
TGACCGTGGAAGCGATGACTCGGAAGACGAAGATTATGTTCCAGAGGGCG
GCCGTCCATCCTCCAAACCCACTGTGAAGAAGAAAAGTAACCGCATAAAC
AAAAGTGACACAAGCATTCAAAACAAGACTTTCAATAATGGCGGAACGTC
ACTTGAATGGGCAGAACTTCCCATCGAAATCTTATCGATGATATTTCGTT
TCATCACAGCAACAGAATCGAAAGGTGTTCGTTACATTCTTCGATGTTCA
CAAGTTTGCCAGCACTGGCGAAACGTGGTTAACAATGAAGCCTCCTGGTT
TGATATCGATCTCTCATTTGTTGGGCCCAGCCACAAAGAACGAAAAATCA
CGCGAATCCTGTCTAAAATCTGTCCCATACAACTAGTCTGTGTTCGCTCG
CTTAGCCTGAGTGGATGGTGCGAGTTGACCGATGAGGGTCTGGATCACGT
GTCTGAGAATTGCACCAAGATTGAGAAACTGGATCTGTCGTCGTGTCAGA
AAAGCGTTGCAAAGTTAACAAGTTCTTCTTTGTTAAACATTGCTGAGAAT
TGTACTGAATTACAAAAGTTGAATGTTTCTAATTTACGTGTCAACAGTTA
TAATCAAATATGGAGTAAATTTCTTCAAATACGCGGTGCAGGACTTATCA
GTATGAATTTTAGTAATAATATCCCTTTCTCAAATACTTGTTTCAAGTTG
ATTACTGACAATTGTCCGTTATTGAAAATCCTTGATTGTTCTAATACCGG
TCTTAGGAGTTTATCTCTTCAAGAGTTCCAGACGAAATGTCCGTTACTGG
AAGAACTGTATTTGGCAAACGTCAATATTGTCGTACGACGTCATAATAAC
GAGCTGAAAACGTGCCCTGGGTTCGACCATTTGTCCTTAGTCAGTTTCGC
TTCACAGAATTTCAACTGCTGGGTAACAGATGAGGTTTTAAATGGGTTTC
TCAAAAGCGCTATCAGTTTGAAAACTCTTGATATCAGAGGTGCGAAATCG
GTTTACGAACTTGATATGGATATCGCGGCTACTTCATTGGAAAGGCTGTA
TATTTCTGATGTTCCTCTAAATGAGGAGATTACTGAAGCTATTTGTGAAA
GATAGatgttgaACAGTGTATATGCAGCCATCAATCAACGCACACTTGCG
ATAGCCGATCGTAACCTAGCAACGTATGGCCTGAACGGACAATTGCCGTC
CGATACAGACGACGAGGACTATATTCCATCAGGGGAACCCTCTGCCAAGA
CAAACAAAAGGAAGAGAAAGATGACCAGGAAAGTGATATCAACTTCTGAG
GATGAAGACGGTGATTCCATTGAGAGTGATCATAGTGAAGAGAAGGAAGA
GAAGCCAAAAGcgaaaagaaagaaaaagaaacttaCACCTGGCAAGAGAA
AGAAAGCGAATGCAAAGATTAAAAATGCAGATGACGACGAGAAACCGTCa
acttcaaattcaaagaagaaaaaagGCGATGTAAAGAAAAAGTCAACATC
TTCTGCTACAAAGAAAACTAAAGCAAAAGCAACCAACAACAAACCAGATG
AAGACTCTACAAGTACTCGTAAAAAATCGAACCGATCGAAGCTTTTGTTT
GGAGCTGACCGTGGAAGCGATGACTCGGAAGACGAAGATTATGTTCCAGA
GGGCGGCCGTCCATCCTCCAAACCCACTGTGAAGAAGAAAAGTAACCGCA
TAAACAAAAGTGACACAAGCATTCAAAACAAGACTTTCAATAATGGCGGA
ACGTCACTTGAATGGGCAGAACTTCCCATCGAAATCTTATCGATGATATT
TCGTTTCATCACAGCAACAGAATCGAAAGGTGTTCGTTACATTCTTCGAT
GTTCACAAGTTTGCCAGCACTGGCGAAACGTGGTTAACAATGAAGCCTCC
TGGTTTGATATCGATCTCTCATTTGTTGGGCCCAGCCACAAAGAACGAAA
AATCACGCGAATCCTGTCTAAAATCTGTCCCATACAACTAGTCTGTGTTC
GCTCGCTTAGCCTGAGTGGATGGTGCGAGTTGACCGATGAGGGTCTGGAT
CACGTGTCTGAGAATTGCACCAAGATTGAGAAACTGGATCTGTCGTCGTG
TCAGAAAAGCGTTGCAAAGTTAACAAGTTCTTCTTTGTTAAACATTGCTG
AGAATTGTACTGAATTACAAAAGTTGAATGTTTCTAATTTACGTGTCAAC
AGTTATAATCAAATATGGAGTAAATTTCTTCAAATACGCGGTGCAGGACT
TATCAGTATGAATTTTAGTAATAATATCCCTTTCTCAAATACTTGTTTCA
AGTTGATTACTGACAATTGTCCGTTATTGAAAATCCTTGATTGTTCTAAT
ACCGGTCTTAGGAGTTTATCTCTTCAAGAGTTCCAGACGAAATGTCCGTT
ACTGGAAGAACTGTATTTGGCAAACGTCAATATTGTCGTACGACGTCATA
ATAACGAGCTGAAAACGTGCCCTGGGTTCGACCATTTGTCCTTAGTCAGT
TTCGCTTCACAGAATTTCAACTGCTGGGTAACAGATGAGGTTTTAAATGG
GTTTCTCAAAAGCGCTATCAGTTTGAAAACTCTTGATATCAGAGGTGCGA
AATCGGTTTACGAACTTGATATGGATATCGCGGCTACTTCATTGGAAAGG
CTGTATATTTCTGATGTTCCTCTAAATGAGGAGATTACTGAAGCTATTTG
TGAAAGATAGatgttgaACAGTGTATATGCAGCCATCAATCAACGCACAC
TTGCGATAGCCGATCGTAACCTAGCAACGTATGGCCTGAACGGACAATTG
CCGTCCGATACAGACGACGAGGACTATATTCCATCAGGGGAACCCTCTGC
CAAGACAAACAAAAGGAAGAGAAAGATGACCAGGAAAGTGATATCAACTT
CTGAGGATGAAGACGGTGATTCCATTGAGAGTGATCATAGTGAAGAGAAG
GAAGAGAAGCCAAAAGcgaaaagaaagaaaaagaaacttaCACCTGGCAA
GAGAAAGAAAGCGAATGCAAAGATTAAAAATGCAGATGACGACGAGAAAC
CGTCaacttcaaattcaaagaagaaaaaagGCGATGTAAAGAAAAAGTCA
ACATCTTCTGCTACAAAGAAAACTAAAGCAAAAGCAACCAACAACAAACC
AGATGAAGACTCTACAAGTACTCGTAAAAAATCGAACCGATCGAAGCTTT
TGTTTGGAGCTGACCGTGGAAGCGATGACTCGGAAGACGAAGATTATGTT
CCAGAGGGCGGCCGTCCATCCTCCAAACCCACTGTGAAGAAGAAAAGTAA
CCGCATAAACAAAAGTGACACAAGCATTCAAAACAAGACTTTCAATAATG
GCGGAACGTCACTTGAATGGGCAGAACTTCCCATCGAAATCTTATCGATG
ATATTTCGTTTCATCACAGCAACAGAATCGAAAGGTGTTCGTTACATTCT
TCGATGTTCACAAGTTTGCCAGCACTGGCGAAACGTGGTTAACAATGAAG
CCTCCTGGTTTGATATCGATCTCTCATTTGTTGGGCCCAGCCACAAAGAA
CGAAAAATCACGCGAATCCTGTCTAAAATCTGTCCCATACAACTAGTCTG
TGTTCGCTCGCTTAGCCTGAGTGGATGGTGCGAGTTGACCGATGAGGGTC
TGGATCACGTGTCTGAGAATTGCACCAAGATTGAGAAACTGGATCTGTCG
TCGTGTCAGAAAAGCGTTGCAAAGTTAACAAGTTCTTCTTTGTTAAACAT
TGCTGAGAATTGTACTGAATTACAAAAGTTGAATGTTTCTAATTTACGTG
TCAACAGTTATAATCAAATATGGAGTAAATTTCTTCAAATACGCGGTGCA
GGACTTATCAGTATGAATTTTAGTAATAATATCCCTTTCTCAAATACTTG
TTTCAAGTTGATTACTGACAATTGTCCGTTATTGAAAATCCTTGATTGTT
CTAATACCGGTCTTAGGAGTTTATCTCTTCAAGAGTTCCAGACGAAATGT
CCGTTACTGGAAGAACTGTATTTGGCAAACGTCAATATTGTCGTACGACG
TCATAATAACGAGCTGAAAACGTGCCCTGGGTTCGACCATTTGTCCTTAG
TCAGTTTCGCTTCACAGAATTTCAACTGCTGGGTAACAGATGAGGTTTTA
AATGGGTTTCTCAAAAGCGCTATCAGTTTGAAAACTCTTGATATCAGAGG
TGCGAAATCGGTTTACGAACTTGATATGGATATCGCGGCTACTTCATTGG
AAAGGCTGTATATTTCTGATGTTCCTCTAAATGAGGAGATTACTGAAGCT
ATTTGTGAAAGATAGatgttgaACAGTGTATATGCAGCCATCAATCAACG
CACACTTGCGATAGCCGATCGTAACCTAGCAACGTATGGCCTGAACGGAC
AATTGCCGTCCGATACAGACGACGAGGACTATATTCCATCAGGGGAACCC
TCTGCCAAGACAAACAAAAGGAAGAGAAAGATGACCAGGAAAGTGATATC
AACTTCTGAGGATGAAGACGGTGATTCCATTGAGAGTGATCATAGTGAAG
AGAAGGAAGAGAAGCCAAAAGcgaaaagaaagaaaaagaaacttaCACCT
GGCAAGAGAAAGAAAGCGAATGCAAAGATTAAAAATGCAGATGACGACGA
GAAACCGTCaacttcaaattcaaagaagaaaaaagGCGATGTAAAGAAAA
AGTCAACATCTTCTGCTACAAAGAAAACTAAAGCAAAAGCAACCAACAAC
AAACCAGATGAAGACTCTACAAGTACTCGTAAAAAATCGAACCGATCGAA
GCTTTTGTTTGGAGCTGACCGTGGAAGCGATGACTCGGAAGACGAAGATT
ATGTTCCAGAGGGCGGCCGTCCATCCTCCAAACCCACTGTGAAGAAGAAA
AGTAACCGCATAAACAAAAGTGACACAAGCATTCAAAACAAGACTTTCAA
TAATGGCGGAACGTCACTTGAATGGGCAGAACTTCCCATCGAAATCTTAT
CGATGATATTTCGTTTCATCACAGCAACAGAATCGAAAGGTGTTCGTTAC
ATTCTTCGATGTTCACAAGTTTGCCAGCACTGGCGAAACGTGGTTAACAA
TGAAGCCTCCTGGTTTGATATCGATCTCTCATTTGTTGGGCCCAGCCACA
AAGAACGAAAAATCACGCGAATCCTGTCTAAAATCTGTCCCATACAACTA
GTCTGTGTTCGCTCGCTTAGCCTGAGTGGATGGTGCGAGTTGACCGATGA
GGGTCTGGATCACGTGTCTGAGAATTGCACCAAGATTGAGAAACTGGATC
TGTCGTCGTGTCAGAAAAGCGTTGCAAAGTTAACAAGTTCTTCTTTGTTA
AACATTGCTGAGAATTGTACTGAATTACAAAAGTTGAATGTTTCTAATTT
ACGTGTCAACAGTTATAATCAAATATGGAGTAAATTTCTTCAAATACGCG
GTGCAGGACTTATCAGTATGAATTTTAGTAATAATATCCCTTTCTCAAAT
ACTTGTTTCAAGTTGATTACTGACAATTGTCCGTTATTGAAAATCCTTGA
TTGTTCTAATACCGGTCTTAGGAGTTTATCTCTTCAAGAGTTCCAGACGA
AATGTCCGTTACTGGAAGAACTGTATTTGGCAAACGTCAATATTGTCGTA
CGACGTCATAATAACGAGCTGAAAACGTGCCCTGGGTTCGACCATTTGTC
CTTAGTCAGTTTCGCTTCACAGAATTTCAACTGCTGGGTAACAGATGAGG
TTTTAAATGGGTTTCTCAAAAGCGCTATCAGTTTGAAAACTCTTGATATC
AGAGGTGCGAAATCGGTTTACGAACTTGATATGGATATCGCGGCTACTTC
ATTGGAAAGGCTGTATATTTCTGATGTTCCTCTAAATGAGGAGATTACTG
AAGCTATTTGTGAAAGATAGatgttgaACAGTGTATATGCAGCCATCAAT
CAACGCACACTTGCGATAGCCGATCGTAACCTAGCAACGTATGGCCTGAA
CGGACAATTGCCGTCCGATACAGACGACGAGGACTATATTCCATCAGGGG
AACCCTCTGCCAAGACAAACAAAAGGAAGAGAAAGATGACCAGGAAAGTG
ATATCAACTTCTGAGGATGAAGACGGTGATTCCATTGAGAGTGATCATAG
TGAAGAGAAGGAAGAGAAGCCAAAAGcgaaaagaaagaaaaagaaactta
CACCTGGCAAGAGAAAGAAAGCGAATGCAAAGATTAAAAATGCAGATGAC
GACGAGAAACCGTCaacttcaaattcaaagaagaaaaaagGCGATGTAAA
GAAAAAGTCAACATCTTCTGCTACAAAGAAAACTAAAGCAAAAGCAACCA
ACAACAAACCAGATGAAGACTCTACAAGTACTCGTAAAAAATCGAACCGA
TCGAAGCTTTTGTTTGGAGCTGACCGTGGAAGCGATGACTCGGAAGACGA
AGATTATGTTCCAGAGGGCGGCCGTCCATCCTCCAAACCCACTGTGAAGA
AGAAAAGTAACCGCATAAACAAAAGTGACACAAGCATTCAAAACAAGACT
TTCAATAATGGCGGAACGTCACTTGAATGGGCAGAACTTCCCATCGAAAT
CTTATCGATGATATTTCGTTTCATCACAGCAACAGAATCGAAAGGTGTTC
GTTACATTCTTCGATGTTCACAAGTTTGCCAGCACTGGCGAAACGTGGTT
AACAATGAAGCCTCCTGGTTTGATATCGATCTCTCATTTGTTGGGCCCAG
CCACAAAGAACGAAAAATCACGCGAATCCTGTCTAAAATCTGTCCCATAC
AACTAGTCTGTGTTCGCTCGCTTAGCCTGAGTGGATGGTGCGAGTTGACC
GATGAGGGTCTGGATCACGTGTCTGAGAATTGCACCAAGATTGAGAAACT
GGATCTGTCGTCGTGTCAGAAAAGCGTTGCAAAGTTAACAAGTTCTTCTT
TGTTAAACATTGCTGAGAATTGTACTGAATTACAAAAGTTGAATGTTTCT
AATTTACGTGTCAACAGTTATAATCAAATATGGAGTAAATTTCTTCAAAT
ACGCGGTGCAGGACTTATCAGTATGAATTTTAGTAATAATATCCCTTTCT
CAAATACTTGTTTCAAGTTGATTACTGACAATTGTCCGTTATTGAAAATC
CTTGATTGTTCTAATACCGGTCTTAGGAGTTTATCTCTTCAAGAGTTCCA
GACGAAATGTCCGTTACTGGAAGAACTGTATTTGGCAAACGTCAATATTG
TCGTACGACGTCATAATAACGAGCTGAAAACGTGCCCTGGGTTCGACCAT
TTGTCCTTAGTCAGTTTCGCTTCACAGAATTTCAACTGCTGGGTAACAGA
TGAGGTTTTAAATGGGTTTCTCAAAAGCGCTATCAGTTTGAAAACTCTTG
ATATCAGAGGTGCGAAATCGGTTTACGAACTTGATATGGATATCGCGGCT
ACTTCATTGGAAAGGCTGTATATTTCTGATGTTCCTCTAAATGAGGAGAT
TACTGAAGCTATTTGTGAAAGATAGatgttgaACAGTGTATATGCAGCCA
TCAATCAACGCACACTTGCGATAGCCGATCGTAACCTAGCAACGTATGGC
CTGAACGGACAATTGCCGTCCGATACAGACGACGAGGACTATATTCCATC
AGGGGAACCCTCTGCCAAGACAAACAAAAGGAAGAGAAAGATGACCAGGA
AAGTGATATCAACTTCTGAGGATGAAGACGGTGATTCCATTGAGAGTGAT
CATAGTGAAGAGAAGGAAGAGAAGCCAAAAGcgaaaagaaagaaaaagaa
acttaCACCTGGCAAGAGAAAGAAAGCGAATGCAAAGATTAAAAATGCAG
ATGACGACGAGAAACCGTCaacttcaaattcaaagaagaaaaaagGCGAT
GTAAAGAAAAAGTCAACATCTTCTGCTACAAAGAAAACTAAAGCAAAAGC
AACCAACAACAAACCAGATGAAGACTCTACAAGTACTCGTAAAAAATCGA
ACCGATCGAAGCTTTTGTTTGGAGCTGACCGTGGAAGCGATGACTCGGAA
GACGAAGATTATGTTCCAGAGGGCGGCCGTCCATCCTCCAAACCCACTGT
GAAGAAGAAAAGTAACCGCATAAACAAAAGTGACACAAGCATTCAAAACA
AGACTTTCAATAATGGCGGAACGTCACTTGAATGGGCAGAACTTCCCATC
GAAATCTTATCGATGATATTTCGTTTCATCACAGCAACAGAATCGAAAGG
TGTTCGTTACATTCTTCGATGTTCACAAGTTTGCCAGCACTGGCGAAACG
TGGTTAACAATGAAGCCTCCTGGTTTGATATCGATCTCTCATTTGTTGGG
CCCAGCCACAAAGAACGAAAAATCACGCGAATCCTGTCTAAAATCTGTCC
CATACAACTAGTCTGTGTTCGCTCGCTTAGCCTGAGTGGATGGTGCGAGT
TGACCGATGAGGGTCTGGATCACGTGTCTGAGAATTGCACCAAGATTGAG
AAACTGGATCTGTCGTCGTGTCAGAAAAGCGTTGCAAAGTTAACAAGTTC
TTCTTTGTTAAACATTGCTGAGAATTGTACTGAATTACAAAAGTTGAATG
TTTCTAATTTACGTGTCAACAGTTATAATCAAATATGGAGTAAATTTCTT
CAAATACGCGGTGCAGGACTTATCAGTATGAATTTTAGTAATAATATCCC
TTTCTCAAATACTTGTTTCAAGTTGATTACTGACAATTGTCCGTTATTGA
AAATCCTTGATTGTTCTAATACCGGTCTTAGGAGTTTATCTCTTCAAGAG
TTCCAGACGAAATGTCCGTTACTGGAAGAACTGTATTTGGCAAACGTCAA
TATTGTCGTACGACGTCATAATAACGAGCTGAAAACGTGCCCTGGGTTCG
ACCATTTGTCCTTAGTCAGTTTCGCTTCACAGAATTTCAACTGCTGGGTA
ACAGATGAGGTTTTAAATGGGTTTCTCAAAAGCGCTATCAGTTTGAAAAC
TCTTGATATCAGAGGTGCGAAATCGGTTTACGAACTTGATATGGATATCG
CGGCTACTTCATTGGAAAGGCTGTATATTTCTGATGTTCCTCTAAATGAG
GAGATTACTGAAGCTATTTGTGAAAGATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022359XLOC_022359Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037604-proteinTCONS_00037604-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037604-exon-sc0001666-1491911889:17945..18253TCONS_00037604-exon-sc0001666-1491911889:17945..18253Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1510915933:17945..18253TCONS_00037604-exon-sc0001666-1510915933:17945..18253Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1575043694:17945..18253TCONS_00037604-exon-sc0001666-1575043694:17945..18253Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1491911889:18432..18545TCONS_00037604-exon-sc0001666-1491911889:18432..18545Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1510915933:18432..18545TCONS_00037604-exon-sc0001666-1510915933:18432..18545Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1575043694:18432..18545TCONS_00037604-exon-sc0001666-1575043694:18432..18545Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1491911889:19133..19219TCONS_00037604-exon-sc0001666-1491911889:19133..19219Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1510915933:19133..19219TCONS_00037604-exon-sc0001666-1510915933:19133..19219Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1575043694:19133..19219TCONS_00037604-exon-sc0001666-1575043694:19133..19219Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1491911889:19486..19632TCONS_00037604-exon-sc0001666-1491911889:19486..19632Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1510915933:19486..19632TCONS_00037604-exon-sc0001666-1510915933:19486..19632Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1575043694:19486..19632TCONS_00037604-exon-sc0001666-1575043694:19486..19632Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1491911889:20034..20076TCONS_00037604-exon-sc0001666-1491911889:20034..20076Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1510915933:20034..20076TCONS_00037604-exon-sc0001666-1510915933:20034..20076Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1575043694:20034..20076TCONS_00037604-exon-sc0001666-1575043694:20034..20076Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1491911889:20171..21813TCONS_00037604-exon-sc0001666-1491911889:20171..21813Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1510915933:20171..21813TCONS_00037604-exon-sc0001666-1510915933:20171..21813Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1575043694:20171..21813TCONS_00037604-exon-sc0001666-1575043694:20171..21813Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1491911889:22170..22310TCONS_00037604-exon-sc0001666-1491911889:22170..22310Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1510915933:22170..22310TCONS_00037604-exon-sc0001666-1510915933:22170..22310Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1575043694:22170..22310TCONS_00037604-exon-sc0001666-1575043694:22170..22310Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1491911889:23036..23135TCONS_00037604-exon-sc0001666-1491911889:23036..23135Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1510915933:23036..23135TCONS_00037604-exon-sc0001666-1510915933:23036..23135Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1575043694:23036..23135TCONS_00037604-exon-sc0001666-1575043694:23036..23135Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1491911889:23377..23565TCONS_00037604-exon-sc0001666-1491911889:23377..23565Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1510915933:23377..23565TCONS_00037604-exon-sc0001666-1510915933:23377..23565Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1575043694:23377..23565TCONS_00037604-exon-sc0001666-1575043694:23377..23565Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1491911889:23811..23883TCONS_00037604-exon-sc0001666-1491911889:23811..23883Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1510915933:23811..23883TCONS_00037604-exon-sc0001666-1510915933:23811..23883Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1575043694:23811..23883TCONS_00037604-exon-sc0001666-1575043694:23811..23883Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1491911889:24781..25553TCONS_00037604-exon-sc0001666-1491911889:24781..25553Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1510915933:24781..25553TCONS_00037604-exon-sc0001666-1510915933:24781..25553Clytia hemisphaericaexon
TCONS_00037604-exon-sc0001666-1575043694:24781..25553TCONS_00037604-exon-sc0001666-1575043694:24781..25553Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001666supercontigsc0001666:17945..25553 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.3153	17.7462	4.09093	4.35971	1.74467	1.64944	6.62289	2.38207	3.38571	2.90937e-09	3.15226	1.222	2.22033	0.947419	6.29825	8.04048	14.2848	9.36439	6.26938	2.015	4.75826	5.49817	12.4186	12.5979	0.379887	0	3.43876	2.44957	12.09	11.171
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR032675L_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
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BLAST of TCONS_00037604 vs. Swiss-Prot (Human)
Match: TBCB (Tubulin-folding cofactor B OS=Homo sapiens GN=TBCB PE=1 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 8.822e-62
Identity = 111/237 (46.84%), Postives = 163/237 (68.78%), Query Frame = 1 
Query: 2260 VLLNISSTISQYGSEKRFAKDLLISEFKGKLELITGCQSQWMRLELYNQDNVKMATMDDE-RMLGFYSPEDQWRVHVVDTNPSSVKGEFDDLSKVEKYEISEDDYNNKKDSVRNFMRMNKVGNFSXXXXXXXXXXXXXXXXXTQ-RAKTFKIGDRCETSVPKQQKRRGCVMFIGEVEFKPGHWIGVKYDEPLGKNDGSVKGIRYFTCQQKYGGFVRPSHCEVGDFPEEDLGFSDDEI 2964
            V + ISS+++ + SEKR+++ L I+EFK KLEL+ G  +  M LELY  D+   + +D E  +LG Y  +D  R+HV+D + + + GE++D+S+VEKY IS++ Y+ ++D+VR+F++ +K+G ++EE    ++ E  +   E + +A +  +G RCE     Q  RRG VM++G  +FKPG+WIGV+YDEPLGKNDGSV G RYF CQ KYG FV+P+   VGDFPEED G   DEI
Sbjct:   11 VTVFISSSLNTFRSEKRYSRSLTIAEFKCKLELLVGSPASCMELELYGVDDKFYSKLDQEDALLGSYPVDDGCRIHVIDHSGARL-GEYEDVSRVEKYTISQEAYDQRQDTVRSFLKRSKLGRYNEEERAQQEAEAAQRLAEEKAQASSIPVGSRCEVRAAGQSPRRGTVMYVGLTDFKPGYWIGVRYDEPLGKNDGSVNGKRYFECQAKYGAFVKPAVVTVGDFPEEDYGL--DEI 244
The following BLAST results are available for this feature:
BLAST of TCONS_00037604 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBCB8.822e-6246.84Tubulin-folding cofactor B OS=Homo sapiens GN=TBCB... [more]
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