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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037591 ID=TCONS_00037591|Name=TCONS_00037591|organism=Clytia hemisphaerica|type=transcript|length=1691bp
GTGAGACAAACATGTGTAGATTATTTTTAAAAGCCACAGACCAAGACATT
TAAGAAGTTCCTGAAAAAGTCTTTTAAAAGAGAGGAATTTTTTTATGctt
caagaaattcaagaaaagaagaaacataCTAAAATAACATAAACTAAGAA
TGTTCTTGCTGTTTGTCCTTCTTCTCCTTTTTCTTTCTGGGATATTCCTC
TCTGGTGAATTTGAACCAGTCCTCGTAACTCATGGCATTTTGATCATTTG
GGCAGTATTTGTAACCATAGTATCGTTCGTGCCCATCATCAGTTACCACC
TTGTCACACCTTCTACAGGAATAAGGCTTTCGTTCTTTAGCCTTGGCAGG
GTCCATGCCTTTCGAAAGGTACCTGTAGTAGGTGGACTTGGACACACCAA
CTGGTTTGCCTTCAGACGGTGCTGGTGATGGTCCACATCCAGCTGGGTGG
ATGGAAAACGATGGTGTGGGTCTCGGTAACACGAAAGGGTGTGGTTCAAC
AGGCTTTGGTTTGATAGGGAGGTAATAAAATTGTTGCTGTGGTTGTTGTG
GCATCATAAGTGGTTGGGGAAACTGCATTAACATCTGTGGTGGTACTTGT
TGCAGGAGGGATTGTGGTTGTTGAATTAGTATTGGTGGTTGAGGTGTTGA
TGTTGAAGGTGCTGTCGGCTTTGGCGATGGTTTGGATTTTGCCAGGGTTT
TCGTCAGTTTGGGTTTTGCTGGATTGGGTTTTGAGGGTGGGGATGGCGAC
AACTTGTGAAATTCTGATTGATGAAAGTCTACATGAGATGGACTGGTACT
GATTCGTTCGGCATCTGTTGTTCGTGGAATACGTTTCTTTAATTGGCCGA
TCGTGTCTGATGGTTCCTTGAAGGACACAAGTGGCGCATCATGCGACAAG
TTGAACTTGTTGTTGCCGGTCTTCTTGGTTGTGGTGGTAAAGCCAATGTG
CTGAGGAACGGGTCTTCCTTTCATCAATTAGGTCACTTCTTCCACTCTTG
TCTTGTTTTTGAACCATTTTGACAAAGTGGATTGGTTCACATTAAAGAGA
GTCATGTTAGTTTTCTCTCTAAGGACGGCACTGTTGAAAACTCTGGCGCG
GATGCAATTGTAGTCTTCGAGGATCAACTTGAGCTGAGAAGCAAATTTTG
GTTTCTTGTCGCCAGGACGTGTAATTGTTGTTGAAGCATGGTGTCTGATG
CAAAGTTTAATGAAGATGGCTTCCACGATCCTGTTCTTGGATGGTTGAAA
TGCACTGGTACCACTTGTGAGAAAGGATCTTTTCATGGCGATTTCACGAG
CTGCTGCATGGCCAGACATAGCTTTTTTCCTTGCAAAACGACCAGATGCA
GGCTTCATCTTCACAGGTTGCCATATCATTGCCCTCTTGTCGTATTCTTG
AAGCTGATTGAACGCTGCGATGATGTTTGCAGAGGACGATGGTGGAATGC
AGATGCCCTCTCTCTGTGCCAGTAACATTTCCGTAAGGTGGTCCACTTTA
TCCCAACCGGCAATCCCTTTGGAATCGCAAACTGCTTCCGTTGTTTTCCC
CATTGACGGCTCTTGACTTTCTTCTTCATTGTCCTCTACCTCTTCATCGT
CTGATATCTCTTTCACCGGTTTGTTTTGCAAAGGTGGTTCGGTGTCGAGG
CACATATAATCTTGGTCACCACCGTGACTGTTGTAACCCCC Run BLAST on NCBI protein sequence of TCONS_00037591-protein >TCONS_00037591-protein ID=TCONS_00037591-protein|Name=TCONS_00037591-protein|organism=Clytia hemisphaerica|type=polypeptide|length=276bp
MKGRPVPQHIGFTTTTKKTGNNKFNLSHDAPLVSFKEPSDTIGQLKKRIP
RTTDAERISTSPSHVDFHQSEFHKLSPSPPSKPNPAKPKLTKTLAKSKPS
PKPTAPSTSTPQPPILIQQPQSLLQQVPPQMLMQFPQPLMMPQQPQQQFY
YLPIKPKPVEPHPFVLPRPTPSFSIHPAGCGPSPAPSEGKPVGVSKSTYY
RYLSKGMDPAKAKERKPYSCRRCDKVVTDDGHERYYGYKYCPNDQNAMSY
EDWFKFTREEYPRKKKEKKDKQQEHS Run BLAST on NCBI transcript from alignment at sc0001659:37598..39288 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037591 ID=TCONS_00037591|Name=TCONS_00037591|organism=Clytia hemisphaerica|type=transcript|length=1691bp|location=Sequence derived from alignment at sc0001659:37598..39288 (Clytia hemisphaerica)
GGGGGTTACAACAGTCACGGTGGTGACCAAGATTATATGTGCCTCGACAC
CGAACCACCTTTGCAAAACAAACCGGTGAAAGAGATATCAGACGATGAAG
AGGTAGAGGACAATGAAGAAGAAAGTCAAGAGCCGTCAATGGGGAAAACA
ACGGAAGCAGTTTGCGATTCCAAAGGGATTGCCGGTTGGGATAAAGTGGA
CCACCTTACGGAAATGTTACTGGCACAGAGAGAGGGCATCTGCATTCCAC
CATCGTCCTCTGCAAACATCATCGCAGCGTTCAATCAGCTTCAAGAATAC
GACAAGAGGGCAATGATATGGCAACCTGTGAAGATGAAGCCTGCATCTGG
TCGTTTTGCAAGGAAAAAAGCTATGTCTGGCCATGCAGCAGCTCGTGAAA
TCGCCATGAAAAGATCCTTTCTCACAAGTGGTACCAGTGCATTTCAACCA
TCCAAGAACAGGATCGTGGAAGCCATCTTCATTAAACTTTGCATCAGACA
CCATGCTTCAACAACAATTACACGTCCTGGCGACAAGAAACCAAAATTTG
CTTCTCAGCTCAAGTTGATCCTCGAAGACTACAATTGCATCCGCGCCAGA
GTTTTCAACAGTGCCGTCCTTAGAGAGAAAACTAACATGACTCTCTTTAA
TGTGAACCAATCCACTTTGTCAAAATGGTTCAAAAACAAGACAAGAGTGG
AAGAAGTGACCTAATTGATGAAAGGAAGACCCGTTCCTCAGCACATTGGC
TTTACCACCACAACCAAGAAGACCGGCAACAACAAGTTCAACTTGTCGCA
TGATGCGCCACTTGTGTCCTTCAAGGAACCATCAGACACGATCGGCCAAT
TAAAGAAACGTATTCCACGAACAACAGATGCCGAACGAATCAGTACCAGT
CCATCTCATGTAGACTTTCATCAATCAGAATTTCACAAGTTGTCGCCATC
CCCACCCTCAAAACCCAATCCAGCAAAACCCAAACTGACGAAAACCCTGG
CAAAATCCAAACCATCGCCAAAGCCGACAGCACCTTCAACATCAACACCT
CAACCACCAATACTAATTCAACAACCACAATCCCTCCTGCAACAAGTACC
ACCACAGATGTTAATGCAGTTTCCCCAACCACTTATGATGCCACAACAAC
CACAGCAACAATTTTATTACCTCCCTATCAAACCAAAGCCTGTTGAACCA
CACCCTTTCGTGTTACCGAGACCCACACCATCGTTTTCCATCCACCCAGC
TGGATGTGGACCATCACCAGCACCGTCTGAAGGCAAACCAGTTGGTGTGT
CCAAGTCCACCTACTACAGGTACCTTTCGAAAGGCATGGACCCTGCCAAG
GCTAAAGAACGAAAGCCTTATTCCTGTAGAAGGTGTGACAAGGTGGTAAC
TGATGATGGGCACGAACGATACTATGGTTACAAATACTGCCCAAATGATC
AAAATGCCATGAGTTACGAGGACTGGTTCAAATTCACCAGAGAGGAATAT
CCCAGAAAGAAAAAGGAGAAGAAGGACAAACAGCAAGAACATTCTTAGTT
TATGTTATTTTAGtatgtttcttcttttcttgaatttcttgaagCATAAA
AAAATTCCTCTCTTTTAAAAGACTTTTTCAGGAACTTCTTAAATGTCTTG
GTCTGTGGCTTTTAAAAATAATCTACACATGTTTGTCTCAC Coding sequence (CDS) from alignment at sc0001659:37598..39288 >TCONS_00037591 ID=TCONS_00037591|Name=TCONS_00037591|organism=Clytia hemisphaerica|type=CDS|length=831bp|location=Sequence derived from alignment at sc0001659:37598..39288 (Clytia hemisphaerica)
ATGAAAGGAAGACCCGTTCCTCAGCACATTGGCTTTACCACCACAACCAA
GAAGACCGGCAACAACAAGTTCAACTTGTCGCATGATGCGCCACTTGTGT
CCTTCAAGGAACCATCAGACACGATCGGCCAATTAAAGAAACGTATTCCA
CGAACAACAGATGCCGAACGAATCAGTACCAGTCCATCTCATGTAGACTT
TCATCAATCAGAATTTCACAAGTTGTCGCCATCCCCACCCTCAAAACCCA
ATCCAGCAAAACCCAAACTGACGAAAACCCTGGCAAAATCCAAACCATCG
CCAAAGCCGACAGCACCTTCAACATCAACACCTCAACCACCAATACTAAT
TCAACAACCACAATCCCTCCTGCAACAAGTACCACCACAGATGTTAATGC
AGTTTCCCCAACCACTTATGATGCCACAACAACCACAGCAACAATTTTAT
TACCTCCCTATCAAACCAAAGCCTGTTGAACCACACCCTTTCGTGTTACC
GAGACCCACACCATCGTTTTCCATCCACCCAGCTGGATGTGGACCATCAC
CAGCACCGTCTGAAGGCAAACCAGTTGGTGTGTCCAAGTCCACCTACTAC
AGGTACCTTTCGAAAGGCATGGACCCTGCCAAGGCTAAAGAACGAAAGCC
TTATTCCTGTAGAAGGTGTGACAAGGTGGTAACTGATGATGGGCACGAAC
GATACTATGGTTACAAATACTGCCCAAATGATCAAAATGCCATGAGTTAC
GAGGACTGGTTCAAATTCACCAGAGAGGAATATCCCAGAAAGAAAAAGGA
GAAGAAGGACAAACAGCAAGAACATTCTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037591-exon-sc0001659-1491911889:37598..39288 | TCONS_00037591-exon-sc0001659-1491911889:37598..39288 | Clytia hemisphaerica | exon |
| TCONS_00037591-exon-sc0001659-1510915933:37598..39288 | TCONS_00037591-exon-sc0001659-1510915933:37598..39288 | Clytia hemisphaerica | exon |
| TCONS_00037591-exon-sc0001659-1575043694:37598..39288 | TCONS_00037591-exon-sc0001659-1575043694:37598..39288 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001659 | supercontig | sc0001659:37598..39288 . |
Blast
The following BLAST results are available for this feature:
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