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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037589 ID=TCONS_00037589|Name=TCONS_00037589|organism=Clytia hemisphaerica|type=transcript|length=2161bp
GACGAAGGCAGAATGCTGATTCCCTTCTGCGCAAGTAGCATATCAGTCAG
CTTGTCGATTTTGTCCCAACCAGGTATGCCACGATGATCGCACACTTCTT
CCTGGCTATCCTGACTCTGGCTTCGGCTGCTCTGGCTGTCATCTTCATCC
TCAATCTCCTCATCAGACACTTCCTTGACCATCCCGGTGTTCTTCAAAGG
GTTATCGTTGTCAACAAATACAAAGTCAACACTGTCATGACAGCTGTACA
TACCCATGGTCAAACCCCCATCAGATTCAACCCCAGAGTCCTCAATCCCG
TCGTCAACCTCTTTCTCCACAGTTGACATCTTAAAGTTTTCTTGCTTCAA
GTACTCCACACCGAAAAGCTCATTTATTTTGGCTGATGGTTTTGGCTTGC
CGACAAGCGGTTTGTCAAAAATCTGTGTGTGGAGGGCGTCAACTTTGGCA
CATAGCTCTGCCTCGAACGTACGGAAGGAAGAGACTGAATTGATTGCGTT
GTTTTGGTCGGCATTTTGAACATCTTCTTTGCGAGCTTCGTTCCATCTTG
CCAATCCAGCTAACAGATATGCTTGGAAGTTCACCCCGTTTGCTGATGTA
CCTGGAATAAAATTGACAATGTGGCTGTGAAAAGACTCAAGCGAAACTGT
CCCTCTTGCACATCGATAGAGTGGAAGTTGGATGTCACCTTTCTTTGTTG
TGCCAATTTTGGTGTAGAGGTCAATGGAAACAGGATCTTGGATACATGCG
ACGTGTCTACGTTCCACTTCCCAGATCTCAACCATTTTGTCGGTGAAAAG
TGGGGTCCCAAGAGAGTCCGTTGCACCGGTAAAATGCAGAATCAGGTCGT
CTATCAGCCTCTCTGTTTCGTACTCTCCCCTTGTCATTCTTCTCACGTGA
CGTTGCATCTCTGCTTTGGTCAGGTATTGCTTGACGGTTGCATCAGATGG
TGTTTTGTTGCCTTCTTTCTTGAGGGCTTGCCGTTTAGCTTCCATCAACG
TCTTGTAATCATCCTCATTCCATTTGAATATGCACCCAGACAGAAGAGAC
ATAAAGGTTTGGTACAGTGGATGAGATTCTGAATGTACGCCACATGCCAG
CCTGCGCATAAAGTGCCAAATGTCGAGGCGGATCAACAATTTCAGCCATT
CCATAATCATTGCATCTCTTTCCTTGTCTTCTTTGCTATCACCTCCAGTC
AAGAGATCTTCAATGTCACTGAAAAGCTCCTGCATTTTAGAATTACCACT
TGCATTGCAACAATCCCGATCGGTATACAATACTTTTGGGGGATGGACGT
TTGCAGTTGCATAACGGCGCAAGATTCCGAGCATACGTGGAAAGAAATCA
TTTCGGTGTTGGTACAGATTTTCTAGCTGGCAGTTCTTGAAAGTTGAGGT
TCAAAGGAGCAAACTTTGCATCTCTTTCCTTGTAGCGCTTGCAGTCCTGT
AGATACTTGGCAGCGTTCCTCAAGTAGCTTTCACTGTGTACCTCGTCGAT
GGTCTTTTGAATGGCAGTGGAGCTGTTACCAAGTGAGCGGGCACGAAGCA
TGGTCAGCAAGGATTTGTCAAGTGCATACCGGTACGTCAGACATGCAGGA
AAGGTTTGTTTTGTTGCGAATGGCATTGATTCCAATATGCGATGATCCCA
AGCTGGAACCTTACTCCCACAAGGACATTCGAGATACTCTGTTGCGATGT
AATAATAACATTAGAGATCAAGCACCTTTCGGACTGTTTTATATGTACAC
TTGTGCCACATAATCCTTTTGCACTTTGGATAAAGTATGCATGTAAATTT
CCAGTCCCACATCTTGACTGGCATCCACAAAAAGAGATTTCGTCTAAAAT
ACCCGTCAGGTGTGGGTTTCTTCACGCCGAATGCTTTGGATGGAGGGTAA
TACCAATTCCGCAAATCTTCCCTGAAGCCATGTTCTTTATTCAGGAAAAG
GGCATGGCCAATCCATCCTTGGTCTGTCTCGTCAATGGTGTCCTTCCACT
TTGCTGGTAGCCTGGTAGCATATTCATTTTCCTGACGGGGCTTGCTGGGG
CTTGGTGGCGGCTCCTTTTGTTTGACAGATGTTATTGTGCACAAACTCTC
ACGATCAGTACCCAGTGAAGCACGAACATCAGGAGGTGAAGAAGGTGGTG
CGTCTATTTCT Run BLAST on NCBI protein sequence of TCONS_00037589-protein >TCONS_00037589-protein ID=TCONS_00037589-protein|Name=TCONS_00037589-protein|organism=Clytia hemisphaerica|type=polypeptide|length=444bp
MLGILRRYATANVHPPKVLYTDRDCCNASGNSKMQELFSDIEDLLTGGDS
KEDKERDAMIMEWLKLLIRLDIWHFMRRLACGVHSESHPLYQTFMSLLSG
CIFKWNEDDYKTLMEAKRQALKKEGNKTPSDATVKQYLTKAEMQRHVRRM
TRGEYETERLIDDLILHFTGATDSLGTPLFTDKMVEIWEVERRHVACIQD
PVSIDLYTKIGTTKKGDIQLPLYRCARGTVSLESFHSHIVNFIPGTSANG
VNFQAYLLAGLARWNEARKEDVQNADQNNAINSVSSFRTFEAELCAKVDA
LHTQIFDKPLVGKPKPSAKINELFGVEYLKQENFKMSTVEKEVDDGIEDS
GVESDGGLTMGMYSCHDSVDFVFVDNDNPLKNTGMVKEVSDEEIEDEDDS
QSSRSQSQDSQEEVCDHRGIPGWDKIDKLTDMLLAQKGISILPS Run BLAST on NCBI transcript from alignment at sc0001659:29092..31252 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037589 ID=TCONS_00037589|Name=TCONS_00037589|organism=Clytia hemisphaerica|type=transcript|length=2161bp|location=Sequence derived from alignment at sc0001659:29092..31252 (Clytia hemisphaerica)
AGAAATAGACGCACCACCTTCTTCACCTCCTGATGTTCGTGCTTCACTGG
GTACTGATCGTGAGAGTTTGTGCACAATAACATCTGTCAAACAAAAGGAG
CCGCCACCAAGCCCCAGCAAGCCCCGTCAGGAAAATGAATATGCTACCAG
GCTACCAGCAAAGTGGAAGGACACCATTGACGAGACAGACCAAGGATGGA
TTGGCCATGCCCTTTTCCTGAATAAAGAACATGGCTTCAGGGAAGATTTG
CGGAATTGGTATTACCCTCCATCCAAAGCATTCGGCGTGAAGAAACCCAC
ACCTGACGGGTATTTTAGACGAAATCTCTTTTTGTGGATGCCAGTCAAGA
TGTGGGACTGGAAATTTACATGCATACTTTATCCAAAGTGCAAAAGGATT
ATGTGGCACAAGTGTACATATAAAACAGTCCGAAAGGTGCTTGATCTCTA
ATGTTATTATTACATCGCAACAGAGTATCTCGAATGTCCTTGTGGGAGTA
AGGTTCCAGCTTGGGATCATCGCATATTGGAATCAATGCCATTCGCAACA
AAACAAACCTTTCCTGCATGTCTGACGTACCGGTATGCACTTGACAAATC
CTTGCTGACCATGCTTCGTGCCCGCTCACTTGGTAACAGCTCCACTGCCA
TTCAAAAGACCATCGACGAGGTACACAGTGAAAGCTACTTGAGGAACGCT
GCCAAGTATCTACAGGACTGCAAGCGCTACAAGGAAAGAGATGCAAAGTT
TGCTCCTTTGAACCTCAACTTTCAAGAACTGCCAGCTAGAAAATCTGTAC
CAACACCGAAATGATTTCTTTCCACGTATGCTCGGAATCTTGCGCCGTTA
TGCAACTGCAAACGTCCATCCCCCAAAAGTATTGTATACCGATCGGGATT
GTTGCAATGCAAGTGGTAATTCTAAAATGCAGGAGCTTTTCAGTGACATT
GAAGATCTCTTGACTGGAGGTGATAGCAAAGAAGACAAGGAAAGAGATGC
AATGATTATGGAATGGCTGAAATTGTTGATCCGCCTCGACATTTGGCACT
TTATGCGCAGGCTGGCATGTGGCGTACATTCAGAATCTCATCCACTGTAC
CAAACCTTTATGTCTCTTCTGTCTGGGTGCATATTCAAATGGAATGAGGA
TGATTACAAGACGTTGATGGAAGCTAAACGGCAAGCCCTCAAGAAAGAAG
GCAACAAAACACCATCTGATGCAACCGTCAAGCAATACCTGACCAAAGCA
GAGATGCAACGTCACGTGAGAAGAATGACAAGGGGAGAGTACGAAACAGA
GAGGCTGATAGACGACCTGATTCTGCATTTTACCGGTGCAACGGACTCTC
TTGGGACCCCACTTTTCACCGACAAAATGGTTGAGATCTGGGAAGTGGAA
CGTAGACACGTCGCATGTATCCAAGATCCTGTTTCCATTGACCTCTACAC
CAAAATTGGCACAACAAAGAAAGGTGACATCCAACTTCCACTCTATCGAT
GTGCAAGAGGGACAGTTTCGCTTGAGTCTTTTCACAGCCACATTGTCAAT
TTTATTCCAGGTACATCAGCAAACGGGGTGAACTTCCAAGCATATCTGTT
AGCTGGATTGGCAAGATGGAACGAAGCTCGCAAAGAAGATGTTCAAAATG
CCGACCAAAACAACGCAATCAATTCAGTCTCTTCCTTCCGTACGTTCGAG
GCAGAGCTATGTGCCAAAGTTGACGCCCTCCACACACAGATTTTTGACAA
ACCGCTTGTCGGCAAGCCAAAACCATCAGCCAAAATAAATGAGCTTTTCG
GTGTGGAGTACTTGAAGCAAGAAAACTTTAAGATGTCAACTGTGGAGAAA
GAGGTTGACGACGGGATTGAGGACTCTGGGGTTGAATCTGATGGGGGTTT
GACCATGGGTATGTACAGCTGTCATGACAGTGTTGACTTTGTATTTGTTG
ACAACGATAACCCTTTGAAGAACACCGGGATGGTCAAGGAAGTGTCTGAT
GAGGAGATTGAGGATGAAGATGACAGCCAGAGCAGCCGAAGCCAGAGTCA
GGATAGCCAGGAAGAAGTGTGCGATCATCGTGGCATACCTGGTTGGGACA
AAATCGACAAGCTGACTGATATGCTACTTGCGCAGAAGGGAATCAGCATT
CTGCCTTCGTC Coding sequence (CDS) from alignment at sc0001659:29092..31252 >TCONS_00037589 ID=TCONS_00037589|Name=TCONS_00037589|organism=Clytia hemisphaerica|type=CDS|length=1332bp|location=Sequence derived from alignment at sc0001659:29092..31252 (Clytia hemisphaerica)
ATGCTCGGAATCTTGCGCCGTTATGCAACTGCAAACGTCCATCCCCCAAA
AGTATTGTATACCGATCGGGATTGTTGCAATGCAAGTGGTAATTCTAAAA
TGCAGGAGCTTTTCAGTGACATTGAAGATCTCTTGACTGGAGGTGATAGC
AAAGAAGACAAGGAAAGAGATGCAATGATTATGGAATGGCTGAAATTGTT
GATCCGCCTCGACATTTGGCACTTTATGCGCAGGCTGGCATGTGGCGTAC
ATTCAGAATCTCATCCACTGTACCAAACCTTTATGTCTCTTCTGTCTGGG
TGCATATTCAAATGGAATGAGGATGATTACAAGACGTTGATGGAAGCTAA
ACGGCAAGCCCTCAAGAAAGAAGGCAACAAAACACCATCTGATGCAACCG
TCAAGCAATACCTGACCAAAGCAGAGATGCAACGTCACGTGAGAAGAATG
ACAAGGGGAGAGTACGAAACAGAGAGGCTGATAGACGACCTGATTCTGCA
TTTTACCGGTGCAACGGACTCTCTTGGGACCCCACTTTTCACCGACAAAA
TGGTTGAGATCTGGGAAGTGGAACGTAGACACGTCGCATGTATCCAAGAT
CCTGTTTCCATTGACCTCTACACCAAAATTGGCACAACAAAGAAAGGTGA
CATCCAACTTCCACTCTATCGATGTGCAAGAGGGACAGTTTCGCTTGAGT
CTTTTCACAGCCACATTGTCAATTTTATTCCAGGTACATCAGCAAACGGG
GTGAACTTCCAAGCATATCTGTTAGCTGGATTGGCAAGATGGAACGAAGC
TCGCAAAGAAGATGTTCAAAATGCCGACCAAAACAACGCAATCAATTCAG
TCTCTTCCTTCCGTACGTTCGAGGCAGAGCTATGTGCCAAAGTTGACGCC
CTCCACACACAGATTTTTGACAAACCGCTTGTCGGCAAGCCAAAACCATC
AGCCAAAATAAATGAGCTTTTCGGTGTGGAGTACTTGAAGCAAGAAAACT
TTAAGATGTCAACTGTGGAGAAAGAGGTTGACGACGGGATTGAGGACTCT
GGGGTTGAATCTGATGGGGGTTTGACCATGGGTATGTACAGCTGTCATGA
CAGTGTTGACTTTGTATTTGTTGACAACGATAACCCTTTGAAGAACACCG
GGATGGTCAAGGAAGTGTCTGATGAGGAGATTGAGGATGAAGATGACAGC
CAGAGCAGCCGAAGCCAGAGTCAGGATAGCCAGGAAGAAGTGTGCGATCA
TCGTGGCATACCTGGTTGGGACAAAATCGACAAGCTGACTGATATGCTAC
TTGCGCAGAAGGGAATCAGCATTCTGCCTTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037589-exon-sc0001659-1491911889:29092..31252 | TCONS_00037589-exon-sc0001659-1491911889:29092..31252 | Clytia hemisphaerica | exon |
| TCONS_00037589-exon-sc0001659-1510915933:29092..31252 | TCONS_00037589-exon-sc0001659-1510915933:29092..31252 | Clytia hemisphaerica | exon |
| TCONS_00037589-exon-sc0001659-1575043694:29092..31252 | TCONS_00037589-exon-sc0001659-1575043694:29092..31252 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0001659 | supercontig | sc0001659:29092..31252 . |
Blast
The following BLAST results are available for this feature:
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