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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037582 ID=TCONS_00037582|Name=TCONS_00037582|organism=Clytia hemisphaerica|type=transcript|length=1262bp
tgaattgaaattctGGCGAGTCTGACAAGAGCTTCTTTGTTCAGCTTGGT
TTTGAAGCTGTGTTGGTTGATTCTTCTCTCTACTTCACGGATGACTTCTT
CTTTTGGTAGCGAAGGATACATATCAGCTATGTCAAAACTTATTAACTTT
TCATCATCATTTAAAGTTAAAACTTTCAGTTTATCTACAAAATCACTGGT
ATCTTTAATGAATGACTTTGCATTTGTAGTGAGCGGTTTCAATTCATTAC
TAACAAATTTTGCAACCTTGTAAAAGGTTGATCCTTGAGTGTTTATAATC
AATCTGACTTTGAGTGGGTTTTTATGTGCTTTCAATGTAGGTCTTCCACT
TGGTGTTACTGGTGTAATTTGTTTGAGTTTGTTCaaaagttcttttgaaa
ttttcttctcCTTGTGTAGGTTGTTTAGTTCTTTATTTACCAAGGTTTTG
ACGTTTTCGATATTGTCTTCTATCACAGGTTTATATCGCTCTCTATTGGA
AAGTTCTTTGTCAATAAGCTCCTCAACTTTCTTATTTTCGATGATGCAAG
TGGCTCGACCTTTGTCATTTTCAATCAGGGTAAGACCATTACTTTTTAAC
CATTCCTTTAATCCATTACAGAGTTCTTGTTCAATATTCgttggtttgtt
tttcttcCCGTTTTTAATGATCTTTTTACAATCAAATCGAAATTCGTTGG
CTGCTGATATACTTGGTAACTTTTTGGCCGCCTCCTCTATTCCGCAAATA
AAATCTAACACTGGTAATTCTTTCGTTGCGATTTTGAAGTCAAGACCTTT
TGAAAGTAATGGTATAAACTCGTTTGGTATTTCCTTTTCGGTAAAGTTTA
ACAAAGTTCGTTGTTGATGTGCTTTCCGTTCTTCGTCTGATATTGTGGTA
CTTTGGGTAACTCTCTTTTGTAGcagcttttgaaattttgttgataAGTG
TGACGATTTTCGATCAAgcatttttgaatttctctttTCAGTTAGCTGTT
GTACATTTATATAGTcatttaaagaaagattttcttccAATACAGAGTCT
TGTTTTTTCTTAATCTGCCTTTGTTTAAAacgttttgtataatttttcac
tatcgatctgtttaaaagttttttctccGTATCTTTGAGAAATTTCCTTG
TCGTTGGTGATGCGGAACGTCTTCCTCCTAATCTGCAGTGAATCGGTGTG
ATACCAGATCGCTTACATTTCGATAAAAATTCGATATCCCTGCTCAAAAT
GTCTTCTCTCTT Run BLAST on NCBI protein sequence of TCONS_00037582-protein >TCONS_00037582-protein ID=TCONS_00037582-protein|Name=TCONS_00037582-protein|organism=Clytia hemisphaerica|type=polypeptide|length=420bp
KREDILSRDIEFLSKCKRSGITPIHCRLGGRRSASPTTRKFLKDTEKKLL
NRSIVKNYTKRFKQRQIKKKQDSVLEENLSLNDYINVQQLTEKRNSKMLD
RKSSHLSTKFQKLLQKRVTQSTTISDEERKAHQQRTLLNFTEKEIPNEFI
PLLSKGLDFKIATKELPVLDFICGIEEAAKKLPSISAANEFRFDCKKIIK
NGKKNKPTNIEQELCNGLKEWLKSNGLTLIENDKGRATCIIENKKVEELI
DKELSNRERYKPVIEDNIENVKTLVNKELNNLHKEKKISKELLNKLKQIT
PVTPSGRPTLKAHKNPLKVRLIINTQGSTFYKVAKFVSNELKPLTTNAKS
FIKDTSDFVDKLKVLTLNDDEKLISFDIADMYPSLPKEEVIREVERRINQ
HSFKTKLNKEALVRLARISI Run BLAST on NCBI transcript from alignment at sc0001658:26605..27866 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037582 ID=TCONS_00037582|Name=TCONS_00037582|organism=Clytia hemisphaerica|type=transcript|length=1262bp|location=Sequence derived from alignment at sc0001658:26605..27866 (Clytia hemisphaerica)
AAGAGAGAAGACATTTTGAGCAGGGATATCGAATTTTTATCGAAATGTAA
GCGATCTGGTATCACACCGATTCACTGCAGATTAGGAGGAAGACGTTCCG
CATCACCAACGACAAGGAAATTTCTCAAAGATACggagaaaaaactttta
aacagatcgatagtgaaaaattatacaaaacgtTTTAAACAAAGGCAGAT
TAAGAAAAAACAAGACTCTGTATTggaagaaaatctttctttaaatgACT
ATATAAATGTACAACAGCTAACTGAaaagagaaattcaaaaatgcTTGAT
CGAAAATCGTCACACTtatcaacaaaatttcaaaagctgCTACAAAAGAG
AGTTACCCAAAGTACCACAATATCAGACGAAGAACGGAAAGCACATCAAC
AACGAACTTTGTTAAACTTTACCGAAAAGGAAATACCAAACGAGTTTATA
CCATTACTTTCAAAAGGTCTTGACTTCAAAATCGCAACGAAAGAATTACC
AGTGTTAGATTTTATTTGCGGAATAGAGGAGGCGGCCAAAAAGTTACCAA
GTATATCAGCAGCCAACGAATTTCGATTTGATTGTAAAAAGATCATTAAA
AACGGgaagaaaaacaaaccaacGAATATTGAACAAGAACTCTGTAATGG
ATTAAAGGAATGGTTAAAAAGTAATGGTCTTACCCTGATTGAAAATGACA
AAGGTCGAGCCACTTGCATCATCGAAAATAAGAAAGTTGAGGAGCTTATT
GACAAAGAACTTTCCAATAGAGAGCGATATAAACCTGTGATAGAAGACAA
TATCGAAAACGTCAAAACCTTGGTAAATAAAGAACTAAACAACCTACACA
AGgagaagaaaatttcaaaagaacttttGAACAAACTCAAACAAATTACA
CCAGTAACACCAAGTGGAAGACCTACATTGAAAGCACATAAAAACCCACT
CAAAGTCAGATTGATTATAAACACTCAAGGATCAACCTTTTACAAGGTTG
CAAAATTTGTTAGTAATGAATTGAAACCGCTCACTACAAATGCAAAGTCA
TTCATTAAAGATACCAGTGATTTTGTAGATAAACTGAAAGTTTTAACTTT
AAATGATGATGAAAAGTTAATAAGTTTTGACATAGCTGATATGTATCCTT
CGCTACCAAAAGAAGAAGTCATCCGTGAAGTAGAGAGAAGAATCAACCAA
CACAGCTTCAAAACCAAGCTGAACAAAGAAGCTCTTGTCAGACTCGCCag
aatttcaattca Coding sequence (CDS) from alignment at sc0001658:26605..27866 >TCONS_00037582 ID=TCONS_00037582|Name=TCONS_00037582|organism=Clytia hemisphaerica|type=CDS|length=1260bp|location=Sequence derived from alignment at sc0001658:26605..27866 (Clytia hemisphaerica)
AAGAGAGAAGACATTTTGAGCAGGGATATCGAATTTTTATCGAAATGTAA
GCGATCTGGTATCACACCGATTCACTGCAGATTAGGAGGAAGACGTTCCG
CATCACCAACGACAAGGAAATTTCTCAAAGATACggagaaaaaactttta
aacagatcgatagtgaaaaattatacaaaacgtTTTAAACAAAGGCAGAT
TAAGAAAAAACAAGACTCTGTATTggaagaaaatctttctttaaatgACT
ATATAAATGTACAACAGCTAACTGAaaagagaaattcaaaaatgcTTGAT
CGAAAATCGTCACACTtatcaacaaaatttcaaaagctgCTACAAAAGAG
AGTTACCCAAAGTACCACAATATCAGACGAAGAACGGAAAGCACATCAAC
AACGAACTTTGTTAAACTTTACCGAAAAGGAAATACCAAACGAGTTTATA
CCATTACTTTCAAAAGGTCTTGACTTCAAAATCGCAACGAAAGAATTACC
AGTGTTAGATTTTATTTGCGGAATAGAGGAGGCGGCCAAAAAGTTACCAA
GTATATCAGCAGCCAACGAATTTCGATTTGATTGTAAAAAGATCATTAAA
AACGGgaagaaaaacaaaccaacGAATATTGAACAAGAACTCTGTAATGG
ATTAAAGGAATGGTTAAAAAGTAATGGTCTTACCCTGATTGAAAATGACA
AAGGTCGAGCCACTTGCATCATCGAAAATAAGAAAGTTGAGGAGCTTATT
GACAAAGAACTTTCCAATAGAGAGCGATATAAACCTGTGATAGAAGACAA
TATCGAAAACGTCAAAACCTTGGTAAATAAAGAACTAAACAACCTACACA
AGgagaagaaaatttcaaaagaacttttGAACAAACTCAAACAAATTACA
CCAGTAACACCAAGTGGAAGACCTACATTGAAAGCACATAAAAACCCACT
CAAAGTCAGATTGATTATAAACACTCAAGGATCAACCTTTTACAAGGTTG
CAAAATTTGTTAGTAATGAATTGAAACCGCTCACTACAAATGCAAAGTCA
TTCATTAAAGATACCAGTGATTTTGTAGATAAACTGAAAGTTTTAACTTT
AAATGATGATGAAAAGTTAATAAGTTTTGACATAGCTGATATGTATCCTT
CGCTACCAAAAGAAGAAGTCATCCGTGAAGTAGAGAGAAGAATCAACCAA
CACAGCTTCAAAACCAAGCTGAACAAAGAAGCTCTTGTCAGACTCGCCag
aatttcaatt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037582-exon-sc0001658-1491911889:26605..27866 | TCONS_00037582-exon-sc0001658-1491911889:26605..27866 | Clytia hemisphaerica | exon |
| TCONS_00037582-exon-sc0001658-1510915933:26605..27866 | TCONS_00037582-exon-sc0001658-1510915933:26605..27866 | Clytia hemisphaerica | exon |
| TCONS_00037582-exon-sc0001658-1575043694:26605..27866 | TCONS_00037582-exon-sc0001658-1575043694:26605..27866 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001658 | supercontig | sc0001658:26605..27866 . |
Blast
The following BLAST results are available for this feature:
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