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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037564 ID=TCONS_00037564|Name=TCONS_00037564|organism=Clytia hemisphaerica|type=transcript|length=3850bp
ctaattttatttcataaaatctcCGTCGATTTAAGATTGGATAATCGAGA
CTAATCTCTATAACCTTGGAACCCAGACCTCCATCAGCCTTGGTTCAAAG
CTTTATACCTCCCTTCAAAAATGATATCCGGTCGGGGTTCCTCCTCTATC
TCCTTATTATAGAATCTTTGCCAAGTTGACTTATTTGACCACTGTCCTcg
ttttaaaatatctttcattgaCAAGCCCAAAACTTTGGCTTTTGAAGTTG
ATGCAGACCTGCAAGAGTGAGCTTTATATTTAGAGACATGAATCCCAGAG
AGGCTCAGCACTTTCTTCACTCAATTTGAAATGGTGGAAGATTTGACTTC
ATTATGGGGGTTCAAATGACTGAGTAGAAGTTGGTTTTTCTGTCCATCTC
CTCTCCATTCCTTAGTCCTCTCCAGATAATCTGATAAGCAAGAAACCACA
CACATCCTTTTCATGCTAGAAAATGCCTTAAACTCTAAGACAGGAGGAGG
TTTTCCCTGTATCCAAGACTTAGTGACTTTACTGAAGTAAAACTTGAATG
AGTTTGATGTCTTCACCTTATATCTAATGTCCAAATAACAAATTTCATGA
CACCGTCCAGATGAAGTCAAAAACAAGAGTGCTGTTAACTTCAGGTTCAA
TAGCTGGTCTGACAAAGTCTCATTCTCAGGTAGACTTTCCAGATAACCTA
ACACTTGGTCCACATCCCAGACAAAAAGATACCTAGGCTTAGGGGGCCTC
TGATTGAAAATTCCTGTCAAGAGGGAACAAACCTTAGGATGTTTTCCAAC
ATCAAAACCATCAACCTTCCCATGATAGGCAGAAATAGCGGATCTATGAC
AGTTTATCGTTCTATATTCATACCCCTTCTCATACAAGCTTGCTAAATAA
TCCAACACCAAGTTTAGATCACATTCATTGGGATTAGCCTTTTTTTCACC
ACACCAGCGAACCCATTTGCCCCAGGCCGATTCATAATTAGCTCTAGTAC
CATCTCGCCTGGCCTTGATGATAAAGTCTGAAGCCCTTGTTGATATGCCC
TCTGCAAGAAGGCCTTTCCTGACACTTTCCATGCCACTAGACTCAACGTT
TGGTTCTCTACCAAAGGATGTTCTTGCCCCTGAGGGTTTGCTAACAAAAA
CGGCCTTGGGCTTATTAGAATAGGGTTTGCTACGCACAACTCCAAAATCT
GGTTGTACCACGATTGAGCTGGCCAATGTGGGGTCACCAAAATTTGAGTT
GCCTGTTCTGACTTCAGCTTTGTCAGTGTTCTCCCTATGAGACAAAACGG
TGGGAATGCATATGTTAGTCCTTGGTCTTTCCAATTCAATTGGAATGCAT
CTACTGCCTGACTCATTGGATCTGGTTTCCAAGCTACGTAGAGCTGAAGC
TGGTGACAGGCCCTTGATGCAAAAAGATCTAATGCTGGGATCCCTAGACC
ctgacaaattttttgaaaaactctcTTGTCTAGTTGCCATTCGCTGGAAT
CGTGGAAATTTCTGGATTCCCAGTCTGCTACAAAGTTGTAAATCCCCGGG
AGGTATTCTGCTGTAATCGTGATCCCTTGGTTCAGTGCTAACTCCCATAT
CTCTTTGGACAATTAAACCATCTCCTGGCTCCTTGTCCCCCCCCATCTTC
ACAAGGTATGCTAGGGCTGACATGTTGTCCGTTTGAAAGTGTACATTCCT
CAATATGAACATTTTGTGATAAGTTAACAAGGCGAGGTGAATGGCCTTCA
GTTCGAACACATTTATGTGTCTCCCACTCTCTAGAAGAGTCCAGCGCCCC
CCTGTCCTCTGGTTCTGACAAAAAGCGCCCCAACCCTTCTTTGAGGCATC
CGTCTGGATCACTATTTTTCTGGAGGGTTTCAACAGGGACCTCCCATTGT
AAAGTTCTAGATTGTTCATTCACCATTCCAGCTCCTGCACACTGTTTTCG
TTCAGATCATATGAAAACTGTGGATCCTGACTCAGTTTGGTCATCCGGAT
GTACTGATGCTGAAGATATCGCATCTGAAGAAAAGCTGGAAGAACAGCTT
GAGCTGTTGAGCAAAGATGGCCCAAGAGACTGGCCATTTCCCCTAGGGTA
GTTTGAGGATGTACGATCAGCTTGTAACATTTCTGTTTGAGATTGTCTAC
TTTTTCCTGTGGCAGTGTCAGTCTGTCAGGGACATTTCCACTGAGTCCAC
CTCCAAACCCGAAAATTCTGTCTTTTGACATGGGGTTAGAACAGATTTCT
TCAAGTTTATGACAAATCCCAGTTGTTGAAAGAGAAAAATCAGAGTATCT
CTTGCCATTTCTAATTCTGAAATGGATTGTGCCATCAAAAGGATGTCGTC
TAGATATATGATGAGCCTGATATTTATCCTCCTCAAAAGAGCTATTGGAA
TTTTCagcaattttgtaaaaattcgtgGGGCAGGTCCCAGGCCAAAGCAT
AGGCATAAGAACTCGTATAGCTGCCCTTCCCAACGAAACCGAATGTATTT
TCTCTGACTGTGGTGAAGAGGGACGCTGTAATAAGCGTCCTTCAAATCTA
TCTTGCATAAATAATCTCCCTCTTTCAACAGATCTTTTAGCAAATGTAAA
CCCTCCATTTTGAAGTGAAGGTAGGGGATGAAGGCATTCAGATGTTTCAA
ATTTATGACAGGTCTGTTGCCCCCTGTTTTCTTGGTCACTAAGAAAATAT
TGCTCAAGAATTGACCCTTCTGATCCTGAACTTTTCGGATTGCACCTTTC
TTTAACATGGCTTCCACCTCTAGATCCACTAGATCCTTCTCCTCCTTGGA
CATTTTTGCCTGATGAGGAAgttttctatgaaaaggttgttCTAAGAAGT
CTATTTTTAAACCTTTgacccaattcaaaatttctgggttgcttgttaat
ttttcccattgagtgacaaaatattttaaccTTCCtgcaaaagggaaatt
ccctactAGGTGTTTTGGGAACAGTTTTCGAATCATTGGATGTACCCTTT
TTAGCTGGGTTAGTGGAaatatttctggaaaattttctgaAGCCATATTG
GTGAAAGATGCCCTCCTTTTTAACAAGTGAGTGGCTCTTACCGATGTTTG
TTCCTTGACGTGGAGCCTTGTTGAATCGTTTGAATTTATTATTCCGATAG
TTGGATGCACCTCCTCGTCCTGACCAACCAAATCTTCTACTTGATGGTCT
TGAATTTGATGTTGATGAAGTCTCGGAGTTGTCCTCGTAGCTTCGCCCCC
CATTTTGAAACTTCCTAAATGAGGGGCCCCCATGATTGGGCCGTCTGTTT
CCACGACTCGAACCTCTGCGATGGTCTTTATCTTCGTAAACCTCTCTCGA
CTTCTTCTTGGCTTTTGCAATTTCGATAGCATGCTTTCTGAAGGTTTCAC
CAAACAGTTCCTTATCTGAACCATTCAATAACTCAGAATGTTCCTTCAAA
GTGGCTTTTGCTTTAGTGTTCTCAGTGCCAACTGCTTTGAGAATATTCAA
TCTTCTCCGATAAGAAACAGAGTTGAAAGCCTGACCGGTTAACAGGATGG
TACTGTCAATGTAATCCAGGAGTTCTGCCATGTCCACTTCTTCAAAGGAC
TTGGTTTGAAAAACTTCTTCCAAGATAAACCAAACCTTTGCCAATGGACC
CATTACTTGCAAGATCCGACTCTGAACACTCTCAAAAACGTGGTCAAGCT
CTATCTCTCCCCTTCGACGTCGTTCCTCCATTAATTCTCTAAAGTGTTCG
TCCATTTTTGGTGCCTTGCACAAAAAATTTTTAGGGATAGGATTGTTCTT
GGAAACACTGTCTTTAAGTTCCTTCTCCTTTACAAATTGTAGAAAAAACT Run BLAST on NCBI protein sequence of TCONS_00037564-protein >TCONS_00037564-protein ID=TCONS_00037564-protein|Name=TCONS_00037564-protein|organism=Clytia hemisphaerica|type=polypeptide|length=532bp
MNNLELYNGRSLLKPSRKIVIQTDASKKGWGAFCQNQRTGGRWTLLESGR
HINVFELKAIHLALLTYHKMFILRNVHFQTDNMSALAYLVKMGGDKEPGD
GLIVQRDMGVSTEPRDHDYSRIPPGDLQLCSRLGIQKFPRFQRMATRQES
FSKNLSGSRDPSIRSFCIKGLSPASALRSLETRSNESGSRCIPIELERPR
TNICIPTVLSHRENTDKAEVRTGNSNFGDPTLASSIVVQPDFGVVRSKPY
SNKPKAVFVSKPSGARTSFGREPNVESSGMESVRKGLLAEGISTRASDFI
IKARRDGTRANYESAWGKWVRWCGEKKANPNECDLNLVLDYLASLYEKGY
EYRTINCHRSAISAYHGKVDGFDVGKHPKVCSLLTGIFNQRPPKPRYLFV
WDVDQVLGYLESLPENETLSDQLLNLKLTALLFLTSSGRCHEICYLDIRY
KVKTSNSFKFYFSKVTKSWIQGKPPPVLEFKAFSSMKRMCVVSCLSDYLE
RTKEWRGDGQKNQLLLSHLNPHNEVKSSTISN Run BLAST on NCBI transcript from alignment at sc0001655:13356..17205 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037564 ID=TCONS_00037564|Name=TCONS_00037564|organism=Clytia hemisphaerica|type=transcript|length=3850bp|location=Sequence derived from alignment at sc0001655:13356..17205 (Clytia hemisphaerica)
AGTTTTTTCTACAATTTGTAAAGGAGAAGGAACTTAAAGACAGTGTTTCC
AAGAACAATCCTATCCCTAAAAATTTTTTGTGCAAGGCACCAAAAATGGA
CGAACACTTTAGAGAATTAATGGAGGAACGACGTCGAAGGGGAGAGATAG
AGCTTGACCACGTTTTTGAGAGTGTTCAGAGTCGGATCTTGCAAGTAATG
GGTCCATTGGCAAAGGTTTGGTTTATCTTGGAAGAAGTTTTTCAAACCAA
GTCCTTTGAAGAAGTGGACATGGCAGAACTCCTGGATTACATTGACAGTA
CCATCCTGTTAACCGGTCAGGCTTTCAACTCTGTTTCTTATCGGAGAAGA
TTGAATATTCTCAAAGCAGTTGGCACTGAGAACACTAAAGCAAAAGCCAC
TTTGAAGGAACATTCTGAGTTATTGAATGGTTCAGATAAGGAACTGTTTG
GTGAAACCTTCAGAAAGCATGCTATCGAAATTGCAAAAGCCAAGAAGAAG
TCGAGAGAGGTTTACGAAGATAAAGACCATCGCAGAGGTTCGAGTCGTGG
AAACAGACGGCCCAATCATGGGGGCCCCTCATTTAGGAAGTTTCAAAATG
GGGGGCGAAGCTACGAGGACAACTCCGAGACTTCATCAACATCAAATTCA
AGACCATCAAGTAGAAGATTTGGTTGGTCAGGACGAGGAGGTGCATCCAA
CTATCGGAATAATAAATTCAAACGATTCAACAAGGCTCCACGTCAAGGAA
CAAACATCGGTAAGAGCCACTCACTTGTTAAAAAGGAGGGCATCTTTCAC
CAATATGGCTtcagaaaattttccagaaatattTCCACTAACCCAGCTAA
AAAGGGTACATCCAATGATTCGAAAACTGTTCCCAAAACACCTagtaggg
aatttcccttttgcaGGAAggttaaaatattttgtcactcaatgggaaaa
attaacaagcaacccagaaattttgaattgggtcAAAGGTTTAAAAATAG
ACTTCTTAGaacaaccttttcatagaaaacTTCCTCATCAGGCAAAAATG
TCCAAGGAGGAGAAGGATCTAGTGGATCTAGAGGTGGAAGCCATGTTAAA
GAAAGGTGCAATCCGAAAAGTTCAGGATCAGAAGGGTCAATTCTTGAGCA
ATATTTTCTTAGTGACCAAGAAAACAGGGGGCAACAGACCTGTCATAAAT
TTGAAACATCTGAATGCCTTCATCCCCTACCTTCACTTCAAAATGGAGGG
TTTACATTTGCTAAAAGATCTGTTGAAAGAGGGAGATTATTTATGCAAGA
TAGATTTGAAGGACGCTTATTACAGCGTCCCTCTTCACCACAGTCAGAGA
AAATACATTCGGTTTCGTTGGGAAGGGCAGCTATACGAGTTCTTATGCCT
ATGCTTTGGCCTGGGACCTGCCCcacgaatttttacaaaattgctGAAAA
TTCCAATAGCTCTTTTGAGGAGGATAAATATCAGGCTCATCATATATCTA
GACGACATCCTTTTGATGGCACAATCCATTTCAGAATTAGAAATGGCAAG
AGATACTCTGATTTTTCTCTTTCAACAACTGGGATTTGTCATAAACTTGA
AGAAATCTGTTCTAACCCCATGTCAAAAGACAGAATTTTCGGGTTTGGAG
GTGGACTCAGTGGAAATGTCCCTGACAGACTGACACTGCCACAGGAAAAA
GTAGACAATCTCAAACAGAAATGTTACAAGCTGATCGTACATCCTCAAAC
TACCCTAGGGGAAATGGCCAGTCTCTTGGGCCATCTTTGCTCAACAGCTC
AAGCTGTTCTTCCAGCTTTTCTTCAGATGCGATATCTTCAGCATCAGTAC
ATCCGGATGACCAAACTGAGTCAGGATCCACAGTTTTCATATGATCTGAA
CGAAAACAGTGTGCAGGAGCTGGAATGGTGAATGAACAATCTAGAACTTT
ACAATGGGAGGTCCCTGTTGAAACCCTCCAGAAAAATAGTGATCCAGACG
GATGCCTCAAAGAAGGGTTGGGGCGCTTTTTGTCAGAACCAGAGGACAGG
GGGGCGCTGGACTCTTCTAGAGAGTGGGAGACACATAAATGTGTTCGAAC
TGAAGGCCATTCACCTCGCCTTGTTAACTTATCACAAAATGTTCATATTG
AGGAATGTACACTTTCAAACGGACAACATGTCAGCCCTAGCATACCTTGT
GAAGATGGGGGGGGACAAGGAGCCAGGAGATGGTTTAATTGTCCAAAGAG
ATATGGGAGTTAGCACTGAACCAAGGGATCACGATTACAGCAGAATACCT
CCCGGGGATTTACAACTTTGTAGCAGACTGGGAATCCAGAAATTTCCACG
ATTCCAGCGAATGGCAACTAGACAAgagagtttttcaaaaaatttgtcag
GGTCTAGGGATCCCAGCATTAGATCTTTTTGCATCAAGGGCCTGTCACCA
GCTTCAGCTCTACGTAGCTTGGAAACCAGATCCAATGAGTCAGGCAGTAG
ATGCATTCCAATTGAATTGGAAAGACCAAGGACTAACATATGCATTCCCA
CCGTTTTGTCTCATAGGGAGAACACTGACAAAGCTGAAGTCAGAACAGGC
AACTCAAATTTTGGTGACCCCACATTGGCCAGCTCAATCGTGGTACAACC
AGATTTTGGAGTTGTGCGTAGCAAACCCTATTCTAATAAGCCCAAGGCCG
TTTTTGTTAGCAAACCCTCAGGGGCAAGAACATCCTTTGGTAGAGAACCA
AACGTTGAGTCTAGTGGCATGGAAAGTGTCAGGAAAGGCCTTCTTGCAGA
GGGCATATCAACAAGGGCTTCAGACTTTATCATCAAGGCCAGGCGAGATG
GTACTAGAGCTAATTATGAATCGGCCTGGGGCAAATGGGTTCGCTGGTGT
GGTGAAAAAAAGGCTAATCCCAATGAATGTGATCTAAACTTGGTGTTGGA
TTATTTAGCAAGCTTGTATGAGAAGGGGTATGAATATAGAACGATAAACT
GTCATAGATCCGCTATTTCTGCCTATCATGGGAAGGTTGATGGTTTTGAT
GTTGGAAAACATCCTAAGGTTTGTTCCCTCTTGACAGGAATTTTCAATCA
GAGGCCCCCTAAGCCTAGGTATCTTTTTGTCTGGGATGTGGACCAAGTGT
TAGGTTATCTGGAAAGTCTACCTGAGAATGAGACTTTGTCAGACCAGCTA
TTGAACCTGAAGTTAACAGCACTCTTGTTTTTGACTTCATCTGGACGGTG
TCATGAAATTTGTTATTTGGACATTAGATATAAGGTGAAGACATCAAACT
CATTCAAGTTTTACTTCAGTAAAGTCACTAAGTCTTGGATACAGGGAAAA
CCTCCTCCTGTCTTAGAGTTTAAGGCATTTTCTAGCATGAAAAGGATGTG
TGTGGTTTCTTGCTTATCAGATTATCTGGAGAGGACTAAGGAATGGAGAG
GAGATGGACAGAAAAACCAACTTCTACTCAGTCATTTGAACCCCCATAAT
GAAGTCAAATCTTCCACCATTTCAAATTGAGTGAAGAAAGTGCTGAGCCT
CTCTGGGATTCATGTCTCTAAATATAAAGCTCACTCTTGCAGGTCTGCAT
CAACTTCAAAAGCCAAAGTTTTGGGCTTGtcaatgaaagatattttaaaa
cgAGGACAGTGGTCAAATAAGTCAACTTGGCAAAGATTCTATAATAAGGA
GATAGAGGAGGAACCCCGACCGGATATCATTTTTGAAGGGAGGTATAAAG
CTTTGAACCAAGGCTGATGGAGGTCTGGGTTCCAAGGTTATAGAGATTAG
TCTCGATTATCCAATCTTAAATCGACGgagattttatgaaataaaattag
Coding sequence (CDS) from alignment at sc0001655:13356..17205 >TCONS_00037564 ID=TCONS_00037564|Name=TCONS_00037564|organism=Clytia hemisphaerica|type=CDS|length=1599bp|location=Sequence derived from alignment at sc0001655:13356..17205 (Clytia hemisphaerica)
ATGAACAATCTAGAACTTTACAATGGGAGGTCCCTGTTGAAACCCTCCAG
AAAAATAGTGATCCAGACGGATGCCTCAAAGAAGGGTTGGGGCGCTTTTT
GTCAGAACCAGAGGACAGGGGGGCGCTGGACTCTTCTAGAGAGTGGGAGA
CACATAAATGTGTTCGAACTGAAGGCCATTCACCTCGCCTTGTTAACTTA
TCACAAAATGTTCATATTGAGGAATGTACACTTTCAAACGGACAACATGT
CAGCCCTAGCATACCTTGTGAAGATGGGGGGGGACAAGGAGCCAGGAGAT
GGTTTAATTGTCCAAAGAGATATGGGAGTTAGCACTGAACCAAGGGATCA
CGATTACAGCAGAATACCTCCCGGGGATTTACAACTTTGTAGCAGACTGG
GAATCCAGAAATTTCCACGATTCCAGCGAATGGCAACTAGACAAgagagt
ttttcaaaaaatttgtcagGGTCTAGGGATCCCAGCATTAGATCTTTTTG
CATCAAGGGCCTGTCACCAGCTTCAGCTCTACGTAGCTTGGAAACCAGAT
CCAATGAGTCAGGCAGTAGATGCATTCCAATTGAATTGGAAAGACCAAGG
ACTAACATATGCATTCCCACCGTTTTGTCTCATAGGGAGAACACTGACAA
AGCTGAAGTCAGAACAGGCAACTCAAATTTTGGTGACCCCACATTGGCCA
GCTCAATCGTGGTACAACCAGATTTTGGAGTTGTGCGTAGCAAACCCTAT
TCTAATAAGCCCAAGGCCGTTTTTGTTAGCAAACCCTCAGGGGCAAGAAC
ATCCTTTGGTAGAGAACCAAACGTTGAGTCTAGTGGCATGGAAAGTGTCA
GGAAAGGCCTTCTTGCAGAGGGCATATCAACAAGGGCTTCAGACTTTATC
ATCAAGGCCAGGCGAGATGGTACTAGAGCTAATTATGAATCGGCCTGGGG
CAAATGGGTTCGCTGGTGTGGTGAAAAAAAGGCTAATCCCAATGAATGTG
ATCTAAACTTGGTGTTGGATTATTTAGCAAGCTTGTATGAGAAGGGGTAT
GAATATAGAACGATAAACTGTCATAGATCCGCTATTTCTGCCTATCATGG
GAAGGTTGATGGTTTTGATGTTGGAAAACATCCTAAGGTTTGTTCCCTCT
TGACAGGAATTTTCAATCAGAGGCCCCCTAAGCCTAGGTATCTTTTTGTC
TGGGATGTGGACCAAGTGTTAGGTTATCTGGAAAGTCTACCTGAGAATGA
GACTTTGTCAGACCAGCTATTGAACCTGAAGTTAACAGCACTCTTGTTTT
TGACTTCATCTGGACGGTGTCATGAAATTTGTTATTTGGACATTAGATAT
AAGGTGAAGACATCAAACTCATTCAAGTTTTACTTCAGTAAAGTCACTAA
GTCTTGGATACAGGGAAAACCTCCTCCTGTCTTAGAGTTTAAGGCATTTT
CTAGCATGAAAAGGATGTGTGTGGTTTCTTGCTTATCAGATTATCTGGAG
AGGACTAAGGAATGGAGAGGAGATGGACAGAAAAACCAACTTCTACTCAG
TCATTTGAACCCCCATAATGAAGTCAAATCTTCCACCATTTCAAATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037564-exon-sc0001655-1491911889:13356..17205 | TCONS_00037564-exon-sc0001655-1491911889:13356..17205 | Clytia hemisphaerica | exon |
| TCONS_00037564-exon-sc0001655-1510915933:13356..17205 | TCONS_00037564-exon-sc0001655-1510915933:13356..17205 | Clytia hemisphaerica | exon |
| TCONS_00037564-exon-sc0001655-1575043694:13356..17205 | TCONS_00037564-exon-sc0001655-1575043694:13356..17205 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001655 | supercontig | sc0001655:13356..17205 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
Blast
The following BLAST results are available for this feature:
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