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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037489 ID=TCONS_00037489|Name=TCONS_00037489|organism=Clytia hemisphaerica|type=transcript|length=1065bp
tAACAAACCAAGATGTCAGATTTATTGAAACTGCAAAAGCAAGAGAAACA
GGTGGTCTTGCCAGTGTATTAGAATTGAAAGTAGGTGCCCGAATTTTAAT
TTGCAAGAATATTGACATTACTGATAGACTGGTTAACGGTCAAGTTGGAA
CAGTAATGGGATTTAAATATAACTCTGGTAATACCATATCAGGTGTCTAT
GTTAAACTTGATGATGTTCTAGCAGGCAAAAAAGGACCTAATTTAGATCA
TGTCTGTAGAGAAAATGATTGGATATTGATTGGAAGGGCAGAAGCCACTT
TTAACAcaagaaaggaaaagaaaaatcaaaagaaaaaggaaaaaccttTA
ATGGTTCGAAGAACTCAATTTCCTTATCCTGTGCATGTACAAGTCATAAA
GTCCAAGGACTAACACTTCAATCAGCAGTAGTAAGTTTTGATCTATTATC
GCAAAGATATTTCAATGAAGGTCAAATGTATTTTAGTCTATCCAGAGTAA
CAAACATAAATGGATTGTTTTTGACAGGTGAATACGATAGAAAAGCTATC
CGTGCAAACAACGAGGCAGGACTTGAATTTCTTCTGCTTTGACTCCAGGC
AAATATGTTCAAATTTCACTCCTTAATGTTCGCTCTTTGAAGAAACATGC
AATTGACATTACAAAGTGTAAAACTCTTATGAGCAGTGACTTATTATGTC
CTACTGAAACTCAATTGTCACCGTCAAGTGATACAAATGAAGTTGATCAA
ATACTTGGTGATTTCAATATTGAATACAACAACAATTCTGTTAATCGATT
CCAAAATAATGAATGTTGTTTTAATTCTTCAATTTAAATTTTAGAATGTA
ATAGAGCGGCAGGTTAAACTTGTatcgaattttcaaaagaaacctTCAGT
AACCGACCTATCAAACTTTTAATGTTGAACAAACCACCTGATTATTCAAG
AAACAGTTTTCGTGAAGAATTGTTGGAACTTATATATATAATCAAAATAG
ACTTTCATCAAATTCTCGTGAATAAAtaaatgtaaataaataaaattctg
GATAACCCAGTCTCA Run BLAST on NCBI protein sequence of TCONS_00037489-protein >TCONS_00037489-protein ID=TCONS_00037489-protein|Name=TCONS_00037489-protein|organism=Clytia hemisphaerica|type=polypeptide|length=136bp
TNQDVRFIETAKARETGGLASVLELKVGARILICKNIDITDRLVNGQVGT
VMGFKYNSGNTISGVYVKLDDVLAGKKGPNLDHVCRENDWILIGRAEATF
NTRKEKKNQKKKEKPLMVRRTQFPYPVHVQVIKSKD Run BLAST on NCBI transcript from alignment at sc0001642:29483..30603+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037489 ID=TCONS_00037489|Name=TCONS_00037489|organism=Clytia hemisphaerica|type=transcript|length=1121bp|location=Sequence derived from alignment at sc0001642:29483..30603+ (Clytia hemisphaerica)
tAACAAACCAAGATGTCAGATTTATTGAAACTGCAAAAGCAAGAGAAACA
GGTGGTCTTGCCAGTGTATTAGAATTGAAAGTAGGTGCCCGAATTTTAAT
TTGCAAGAATATTGACATTACTGATAGACTGGTTAACGGTCAAGTTGGAA
CAGTAATGGGATTTAAATATAACTCTGGTAATACCATATCAGGTGTCTAT
GTTAAACTTGATGATGTTCTAGCAGGCAAAAAAGGACCTAATTNCCAGGT
GTCTATGTTAAACTTGATGATGTTCTAGCAGGCAAAAAAGGACCTAATTT
AGATCATGTCTGTAGAGAAAATGATTGGATATTGATTGGAAGGGCAGAAG
CCACTTTTAACAcaagaaaggaaaagaaaaatcaaaagaaaaaggaaaaa
ccttTAATGGTTCGAAGAACTCAATTTCCTTATCCTGTGCATGTACAAGT
CATAAAGTCCAAGGACTAACACTTCAATCAGCAGTAGTAAGTTTTGATCT
ATTATCGCAAAGATATTTCAATGAAGGTCAAATGTATTTTAGTCTATCCA
GAGTAACAAACATAAATGGATTGTTTTTGACAGGTGAATACGATAGAAAA
GCTATCCGTGCAAACAACGAGGCAGGACTTGAATTTCTTCTGCTTTGACT
CCAGGCAAATATGTTCAAATTTCACTCCTTAATGTTCGCTCTTTGAAGAA
ACATGCAATTGACATTACAAAGTGTAAAACTCTTATGAGCAGTGACTTAT
TATGTCCTACTGAAACTCAATTGTCACCGTCAAGTGATACAAATGAAGTT
GATCAAATACTTGGTGATTTCAATATTGAATACAACAACAATTCTGTTAA
TCGATTCCAAAATAATGAATGTTGTTTTAATTCTTCAATTTAAATTTTAG
AATGTAATAGAGCGGCAGGTTAAACTTGTatcgaattttcaaaagaaacc
tTCAGTAACCGACCTATCAAACTTTTAATGTTGAACAAACCACCTGATTA
TTCAAGAAACAGTTTTCGTGAAGAATTGTTGGAACTTATATATATAATCA
AAATAGACTTTCATCAAATTCTCGTGAATAAAtaaatgtaaataaataaa
attctgGATAACCCAGTCTCA Coding sequence (CDS) from alignment at sc0001642:29483..30603+ >TCONS_00037489 ID=TCONS_00037489|Name=TCONS_00037489|organism=Clytia hemisphaerica|type=CDS|length=822bp|location=Sequence derived from alignment at sc0001642:29483..30603+ (Clytia hemisphaerica)
ACAAACCAAGATGTCAGATTTATTGAAACTGCAAAAGCAAGAGAAACAGG
TGGTCTTGCCAGTGTATTAGAATTGAAAGTAGGTGCCCGAATTTTAATTT
GCAAGAATATTGACATTACTGATAGACTGGTTAACGGTCAAGTTGGAACA
GTAATGGGATTTAAATATAACTCTGGTAATACCATATCAGGTGTCTATGT
TAAACTTGATGATGTTCTAGCAGGCAAAAAAGGACCTAATTTAGATCATG
TCTGTAGAGAAAATGATTGGATATTGATTGGAAGGGCAGAAGCCACTTTT
AACAcaagaaaggaaaagaaaaatcaaaagaaaaaggaaaaaccttTAAT
GGTTCGAAGAACTCAATTTCCTTATCCTGTGCATGTACAAGTCATAAAGT
CCAAGGACTAAACAAACCAAGATGTCAGATTTATTGAAACTGCAAAAGCA
AGAGAAACAGGTGGTCTTGCCAGTGTATTAGAATTGAAAGTAGGTGCCCG
AATTTTAATTTGCAAGAATATTGACATTACTGATAGACTGGTTAACGGTC
AAGTTGGAACAGTAATGGGATTTAAATATAACTCTGGTAATACCATATCA
GGTGTCTATGTTAAACTTGATGATGTTCTAGCAGGCAAAAAAGGACCTAA
TTTAGATCATGTCTGTAGAGAAAATGATTGGATATTGATTGGAAGGGCAG
AAGCCACTTTTAACAcaagaaaggaaaagaaaaatcaaaagaaaaaggaa
aaaccttTAATGGTTCGAAGAACTCAATTTCCTTATCCTGTGCATGTACA
AGTCATAAAGTCCAAGGACTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037489-exon-sc0001642-1491911889:29483..29707 | TCONS_00037489-exon-sc0001642-1491911889:29483..29707 | Clytia hemisphaerica | exon |
| TCONS_00037489-exon-sc0001642-1510915933:29483..29707 | TCONS_00037489-exon-sc0001642-1510915933:29483..29707 | Clytia hemisphaerica | exon |
| TCONS_00037489-exon-sc0001642-1575043694:29483..29707 | TCONS_00037489-exon-sc0001642-1575043694:29483..29707 | Clytia hemisphaerica | exon |
| TCONS_00037489-exon-sc0001642-1491911889:29764..30603 | TCONS_00037489-exon-sc0001642-1491911889:29764..30603 | Clytia hemisphaerica | exon |
| TCONS_00037489-exon-sc0001642-1510915933:29764..30603 | TCONS_00037489-exon-sc0001642-1510915933:29764..30603 | Clytia hemisphaerica | exon |
| TCONS_00037489-exon-sc0001642-1575043694:29764..30603 | TCONS_00037489-exon-sc0001642-1575043694:29764..30603 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001642 | supercontig | sc0001642:29483..30603 + |
Blast
The following BLAST results are available for this feature:
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